FFCP PHASE1:Hg19::chr13:110959496..110959511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1282 | |EntrezGene=1282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2202 | |HGNC=2202 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEC9,P02462 | |UniProt=F8WEC9,P02462 | ||
|association_with_transcript=0bp_to_ENST00000375815,ENST00000375820,ENST00000397198,NM_001845,uc001vqw.3,uc010agl.2_5end | |association_with_transcript=0bp_to_ENST00000375815,ENST00000375820,ENST00000397198,NM_001845,uc001vqw.3,uc010agl.2_5end | ||
|cluster_id=chr13:110959496..110959511,- | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_1_at_COL4A1_5end | |description=CAGE_peak_1_at_COL4A1_5end | ||
|id=chr13:110959496..110959511,- | |id=chr13:110959496..110959511,- | ||
|ontology_enrichment_celltype=CL:0000222!1.54e-21!119;CL:0000055!7.98e-18!180;CL:0000183!6.98e-12!59;CL:0000220!1.15e-11!246;CL:0002321!1.60e-11!248;CL:0000213!2.09e-10!57;CL:0000215!2.09e-10!57;CL:0000680!6.18e-10!57;CL:0000056!6.18e-10!57;CL:0000355!6.18e-10!57;CL:0000187!1.83e-09!54;CL:0002078!2.95e-09!44;CL:0002139!3.09e-09!24;CL:0000115!3.50e-09!35;CL:0000393!5.77e-09!60;CL:0000211!5.77e-09!60;CL:0000192!7.31e-09!42;CL:0000514!7.31e-09!42;CL:0000057!2.00e-08!75;CL:1000449!2.97e-08!16;CL:0000359!1.98e-07!32;CL:0000136!5.73e-07!15 | |ontology_enrichment_celltype=CL:0000222!1.54e-21!119;CL:0000055!7.98e-18!180;CL:0000183!6.98e-12!59;CL:0000220!1.15e-11!246;CL:0002321!1.60e-11!248;CL:0000213!2.09e-10!57;CL:0000215!2.09e-10!57;CL:0000680!6.18e-10!57;CL:0000056!6.18e-10!57;CL:0000355!6.18e-10!57;CL:0000187!1.83e-09!54;CL:0002078!2.95e-09!44;CL:0002139!3.09e-09!24;CL:0000115!3.50e-09!35;CL:0000393!5.77e-09!60;CL:0000211!5.77e-09!60;CL:0000192!7.31e-09!42;CL:0000514!7.31e-09!42;CL:0000057!2.00e-08!75;CL:1000449!2.97e-08!16;CL:0000359!1.98e-07!32;CL:0000136!5.73e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.79e-09;24!CL:1000449;1.43e-08;15!CL:0000115;2.05e-08;36!CL:0000136;2.31e-08;13!CL:0000359;4.39e-07;32!CL:0002681;6.10e-07;12!CL:0002584;6.10e-07;12!CL:1000497;6.13e-07;17!CL:0002518;6.13e-07;17!CL:0000213;6.19e-07;58!CL:0000215;6.19e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.98e-22,121;CL:0002321,5.40e-12,250;CL:0000213,6.23e-11,58;CL:0000215,6.23e-11,58;CL:0000680,6.23e-10,58;CL:0000056,6.23e-10,58;CL:0000355,6.23e-10,58;CL:0002078,8.64e-10,45;CL:0000115,9.60e-10,36;CL:0000187,1.86e-09,55;CL:0002139,2.82e-09,24;CL:0000393,5.68e-09,61;CL:0000211,5.68e-09,61;CL:0000057,5.97e-09,76;CL:0000192,7.81e-09,43;CL:0000514,7.81e-09,43;CL:1000449,1.44e-08,15;CL:0000359,1.85e-07,32;CL:0000136,5.37e-07,15;CL:0002681,6.14e-07,12;CL:0002584,6.14e-07,12;CL:1000497,6.35e-07,17;CL:0002518,6.35e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.13e-22!79;UBERON:0007798!7.13e-22!79;UBERON:0003914!1.78e-20!118;UBERON:0004872!5.00e-19!84;UBERON:0001009!5.51e-19!113;UBERON:0004535!2.40e-18!110;UBERON:0000055!4.27e-18!69;UBERON:0000477!8.00e-17!286;UBERON:0004111!1.18e-15!241;UBERON:0000119!1.21e-15!312;UBERON:0005256!8.96e-15!143;UBERON:0001981!1.06e-14!60;UBERON:0007500!1.06e-14!60;UBERON:0004537!1.06e-14!60;UBERON:0006965!1.06e-14!60;UBERON:0000483!1.16e-14!309;UBERON:0000468!5.45e-14!659;UBERON:0000475!1.38e-13!365;UBERON:0000025!3.05e-12!194;UBERON:0000490!5.78e-12!138;UBERON:0000481!7.16e-12!347;UBERON:0002100!8.40e-12!216;UBERON:0002385!2.26e-11!63;UBERON:0001015!2.26e-11!63;UBERON:0000383!2.26e-11!63;UBERON:0003103!4.05e-11!69;UBERON:0001134!4.59e-11!61;UBERON:0002036!4.59e-11!61;UBERON:0003082!4.59e-11!61;UBERON:0000467!4.32e-10!625;UBERON:0000480!7.52e-10!626;UBERON:0000914!1.01e-09!83;UBERON:0002329!1.01e-09!83;UBERON:0003077!1.01e-09!83;UBERON:0003059!1.01e-09!83;UBERON:0007282!1.01e-09!83;UBERON:0009618!1.01e-09!83;UBERON:0007285!1.01e-09!83;UBERON:0004290!1.31e-09!70;UBERON:0001637!2.93e-09!42;UBERON:0003509!2.93e-09!42;UBERON:0004572!2.93e-09!42;UBERON:0000486!4.49e-09!82;UBERON:0004876!8.49e-09!20;UBERON:0003104!8.88e-09!238;UBERON:0009142!8.88e-09!238;UBERON:0000353!2.33e-08!17;UBERON:0006555!2.61e-08!17;UBERON:0005103!2.61e-08!17;UBERON:0000083!2.61e-08!17;UBERON:0009201!2.61e-08!17;UBERON:0004819!2.61e-08!17;UBERON:0006553!2.61e-08!17;UBERON:0003074!2.61e-08!17;UBERON:0003060!2.61e-08!17;UBERON:0000080!2.93e-08!18;UBERON:0002120!2.93e-08!18;UBERON:0004875!2.93e-08!18;UBERON:0005721!2.93e-08!18;UBERON:0005754!2.93e-08!18;UBERON:0007297!2.93e-08!18;UBERON:0004211!2.97e-08!16;UBERON:0001285!2.97e-08!16;UBERON:0007684!2.97e-08!16;UBERON:0003220!2.97e-08!16;UBERON:0004208!2.97e-08!16;UBERON:0003887!3.86e-08!21;UBERON:0003886!1.02e-07!63;UBERON:0007100!1.49e-07!27;UBERON:0003064!3.68e-07!37;UBERON:0000948!5.27e-07!24;UBERON:0005498!5.27e-07!24;UBERON:0004140!5.27e-07!24;UBERON:0009881!5.27e-07!24;UBERON:0004141!5.27e-07!24;UBERON:0003084!5.27e-07!24;UBERON:0007005!5.27e-07!24;UBERON:0004139!5.27e-07!24;UBERON:0004291!5.27e-07!24;UBERON:0002417!7.98e-07!61;UBERON:0000916!7.98e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;3.97e-09;75!UBERON:0007798;3.97e-09;75!UBERON:0000055;4.49e-09;65!UBERON:0003914;7.84e-09;74!UBERON:0006555;1.43e-08;15!UBERON:0004819;1.43e-08;15!UBERON:0001285;1.43e-08;15!UBERON:0007684;1.43e-08;15!UBERON:0000353;5.45e-08;15!UBERON:0007500;1.08e-07;56!UBERON:0001981;1.08e-07;56!UBERON:0004537;1.08e-07;56!UBERON:0001637;1.13e-07;42!UBERON:0003509;1.13e-07;42!UBERON:0004572;1.13e-07;42!UBERON:0007100;2.27e-07;25!UBERON:0001225;6.10e-07;12!UBERON:0008987;6.10e-07;12!UBERON:0000948;8.03e-07;22 | |||
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| ||
|short_description=p1@COL4A1 | |short_description=p1@COL4A1 | ||
}} | }} |
Latest revision as of 12:39, 16 September 2015
Short description: | p1@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL4A1_5end |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | 0bp_to_ENST00000375815, ENST00000375820, ENST00000397198, NM_001845, uc001vqw.3, uc010agl.2_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | F8WEC9P02462 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.98e-22 | 121 |
embryonic cell | 5.40e-12 | 250 |
lining cell | 6.23e-11 | 58 |
barrier cell | 6.23e-11 | 58 |
muscle precursor cell | 6.23e-10 | 58 |
myoblast | 6.23e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.23e-10 | 58 |
meso-epithelial cell | 8.64e-10 | 45 |
endothelial cell | 9.60e-10 | 36 |
muscle cell | 1.86e-09 | 55 |
endothelial cell of vascular tree | 2.82e-09 | 24 |
electrically responsive cell | 5.68e-09 | 61 |
electrically active cell | 5.68e-09 | 61 |
fibroblast | 5.97e-09 | 76 |
smooth muscle cell | 7.81e-09 | 43 |
smooth muscle myoblast | 7.81e-09 | 43 |
epithelial cell of nephron | 1.44e-08 | 15 |
vascular associated smooth muscle cell | 1.85e-07 | 32 |
fat cell | 5.37e-07 | 15 |
kidney cortical cell | 6.14e-07 | 12 |
renal cortical epithelial cell | 6.14e-07 | 12 |
kidney cell | 6.35e-07 | 17 |
kidney epithelial cell | 6.35e-07 | 17 |