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{{CL
{{CL
|id=CL:0000764
|name=erythroid lineage cell
|namespace=cell
|def="A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm]
|xref=FMA:62845;;FMA:83516
|is_a=CL:0000763
|synonym="erythropoietic cell" EXACT []
|comment=NOTE: in FMA erythropoeitic cells are types of nucleated erythrocytes and thus don't include erythrocytes.
|alt_id=CL:0002156
|alt_id=CL:0002156
|disjoint_from=
|comment=Note that in FMA erythropoietic cells are types of nucleated erythrocytes and thus don't include erythrocytes.
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000764
|is_a=CL:0000763
|is_obsolete=
|located_in=
|located_in=
|name=erythroid lineage cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|subset=
|synonym="erythropoietic cell" EXACT []
|union_of=
|xref=FMA:62845;;FMA:83516
}}
}}

Latest revision as of 16:36, 12 September 2014

Name:erythroid lineage cell
Namespace:FANTOM
Definition:"A immature or mature cell in the lineage leading to and including erythrocytes." [GOC:add, GOC:tfm]
Xrefs:
links:

FMA:62845

FMA:83516
Synonyms: "erythropoietic cell" EXACT []
Comments:Note that in FMA erythropoietic cells are types of nucleated erythrocytes and thus don't include erythrocytes.
Alt_id: CL:0002156


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000763(myeloid cell)



Children


is a:CL:0000038 (erythroid progenitor cell),CL:0000547 (proerythroblast),CL:0000558 (reticulocyte),CL:0000765 (erythroblast)
disjoint from:CL:0000556 (megakaryocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11931-125I5 (CD34 cells differentiated to erythrocyte lineage, biol_ rep1)
  • 11932-125I6 (CD34 cells differentiated to erythrocyte lineage, biol_ rep2)
  • 13063-139I3 (J2E erythroblastic leukemia response to erythropoietin)
  • 13064-139I4 (J2E erythroblastic leukemia response to erythropoietin)
  • 13065-139I5 (J2E erythroblastic leukemia response to erythropoietin)
  • 13066-139I6 (J2E erythroblastic leukemia response to erythropoietin)
  • 13067-139I7 (J2E erythroblastic leukemia response to erythropoietin)
  • 13068-139I8 (J2E erythroblastic leukemia response to erythropoietin)
  • 13069-139I9 (J2E erythroblastic leukemia response to erythropoietin)
  • 13070-140A1 (J2E erythroblastic leukemia response to erythropoietin)

... further results Mouse (Mus musculus)

  • 11931-125I5 (CD34 cells differentiated to erythrocyte lineage, biol_ rep1)
  • 11932-125I6 (CD34 cells differentiated to erythrocyte lineage, biol_ rep2)
  • 13063-139I3 (J2E erythroblastic leukemia response to erythropoietin)
  • 13064-139I4 (J2E erythroblastic leukemia response to erythropoietin)
  • 13065-139I5 (J2E erythroblastic leukemia response to erythropoietin)
  • 13066-139I6 (J2E erythroblastic leukemia response to erythropoietin)
  • 13067-139I7 (J2E erythroblastic leukemia response to erythropoietin)
  • 13068-139I8 (J2E erythroblastic leukemia response to erythropoietin)
  • 13069-139I9 (J2E erythroblastic leukemia response to erythropoietin)
  • 13070-140A1 (J2E erythroblastic leukemia response to erythropoietin)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000764 (erythroid lineage cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data