Personal tools

FFCP PHASE1:Mm9::chr3:135489349..135489384,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67547
|EntrezGene=67547
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q91W10
|UniProt=Q91W10
|association_with_transcript=295bp_to_ENSMUST00000029810,uc008rmb.2_5end
|association_with_transcript=295bp_to_ENSMUST00000029810,uc008rmb.2_5end
|cluster_id=chr3:135489349..135489384,+
|description=CAGE_peak_3_at_Slc39a8_5end
|description=CAGE_peak_3_at_Slc39a8_5end
|id=chr3:135489349..135489384,+
|id=chr3:135489349..135489384,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!1.33e-17!66;UBERON:0005177!1.67e-16!85;UBERON:0005172!1.76e-13!49;UBERON:0005173!1.76e-13!49;UBERON:0002417!1.76e-13!49;UBERON:0000916!1.76e-13!49;UBERON:0002100!7.01e-13!98;UBERON:0000466!1.31e-10!79;UBERON:0002107!2.58e-10!22;UBERON:0007499!2.58e-10!22;UBERON:0006925!2.58e-10!22;UBERON:0009497!2.58e-10!22;UBERON:0000015!2.58e-10!22;UBERON:0002423!2.58e-10!22;UBERON:0006235!2.58e-10!22;UBERON:0008835!2.58e-10!22;UBERON:0003894!2.58e-10!22;UBERON:0004161!2.58e-10!22;UBERON:0008836!2.58e-10!22;UBERON:0002365!3.32e-10!25;UBERON:0002330!3.32e-10!25;UBERON:0009854!3.35e-09!23;UBERON:0009856!3.35e-09!23;UBERON:0004119!1.85e-07!130;UBERON:0000925!1.85e-07!130;UBERON:0006595!1.85e-07!130;UBERON:0004921!2.17e-07!126;UBERON:0004185!2.17e-07!126;UBERON:0003914!3.11e-07!47;UBERON:0005153!3.57e-07!17;UBERON:0001007!4.18e-07!128;UBERON:0001555!4.18e-07!128;UBERON:0007026!4.18e-07!128;UBERON:0003104!5.58e-07!131;UBERON:0009142!5.58e-07!131;UBERON:0000077!9.96e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.62e-17,66;UBERON:0005177,2.30e-16,79;UBERON:0005172,6.05e-14,49;UBERON:0005173,6.05e-14,49;UBERON:0002417,6.05e-14,49;UBERON:0000916,6.05e-14,49;UBERON:0002100,7.94e-14,90;UBERON:0002365,5.40e-13,25;UBERON:0002330,5.40e-13,25;UBERON:0002107,2.04e-12,22;UBERON:0007499,2.04e-12,22;UBERON:0006925,2.04e-12,22;UBERON:0009497,2.04e-12,22;UBERON:0000015,2.04e-12,22;UBERON:0002423,2.04e-12,22;UBERON:0006235,2.04e-12,22;UBERON:0008835,2.04e-12,22;UBERON:0003894,2.04e-12,22;UBERON:0004161,2.04e-12,22;UBERON:0008836,2.04e-12,22;UBERON:0009854,1.46e-11,23;UBERON:0009856,1.46e-11,23;UBERON:0005153,9.89e-08,17;UBERON:0003104,2.52e-07,61;UBERON:0009142,2.52e-07,61;UBERON:0003914,3.29e-07,47;UBERON:0001041,4.26e-07,80
|phase1_expression=0.160148847104794,0,0.909998478779072,0,0.500895729946347,0.503637815735669,0.934450562382103,0,0.281577444303333,0.936258105287974,0,0,0,0.0874204024189974,7.99463428357591,5.06188168474565,5.59649502502517,0.157731082679119,0,0,2.38121212422995,0,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0.646413698057667,1.52018735565099,0.504060259519861,0.443461021310609,3.17515336729816,1.23012957516914,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,1.03134418455488,0.404632921719196,0,0.633831403506179,0,0,1.3498495759221,0,0,0,0,0.103689612308478,0.135005938331691,0,1.99955689082663,1.10434270475807,0.122490799214954,0,0,0,1.0214987046815,0.307213066512487,0,0,0,0.837548997004143,0.56276261003168,0.15279824777681,0.294628585473668,0.711858403995515,0.372798891650601,0,0.0755715601067855,22.8992946074325,6.88339101585109,0.679971333707751,1.07940638327563,2.59910566979068,0.448026887097336,1.96622188184453,0,0,0,1.40843419776681,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,1.48439043634778,0,0,1.21439728736295,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0,12.8541383221874,1.01219549843938,0.884610551949874,0.647067399789637,1.10420759230197,1.93950101254089,0,0,0.628340120440365,0.510914110417183,0.239630249011841,0,0.254140454146129,0,0.457500602818626,0.376963056338593,1.04294592115366,0.255715457330331,0.20778804455956,0.162241263067758,1.32391173005411,0.995255764880744,10.108910337347,1.47309299120532,0.650602214813519,0,0.360124259610698,0.90422890701429,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,1.07783996466421,0.567318240503458,0.175951124163949,0,0.278047249225598,1.0447564995665,0.205782136407943,0.199034266818493,0,0.257347907114715,0.568326998791185,3.52113813310353,1.87620847984877,0.540186184383045,0.473489471170421,0.196764231747404,0.771335564436891,1.39520366850245,1.07309360559848,1.40118410840603,0.987359099480883,0.656669856316381,0.0810688095458557,0,0.878200461164203,0.268412837520744,0.630869845692382,0.617427674275707,0.330418782983798,1.32225283331772,0.213288250535234,0.696710015581316,0.902072229254653,1.4117846723634,2.44615848229357,1.90225626112559,0.474529061544512,2.79988223030818,3.51869292320377,6.36660710531683,5.45899443933536,0,0.864552199498777,0.995706366271836,0.569003702859245,0.913988100877831,1.1270773567308,0.814605311381257,0.969762435838129,2.38461787627083,2.78240763346732,2.95220295959204,2.19798218977925,2.09775178667061,2.07516838961004,11.3454671886944,15.3316016188298,15.2906236421701,12.3744674046987,12.0588579876208,6.3656462945355,4.02774592431135,2.91843408195064,3.0201755450689,2.87536413054709,3.72140947668503,4.05648975048929,3.78868316920668,4.66433275156972,0.964887042726734,14.965008403495,0.37898282354097,0.488894929326078,0.848725428875941,0.938760993154008,2.01007508930179,3.80869825417622,4.09780660501378,4.88668946729192,3.10050565508285,4.30527875375215,7.37384916220821,8.11619414769709,8.82359257347221,0,0.54390568381871,12.7858710984949,2.20749397043786,0.481651769963376,0.468846746368813,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.425820255624806,0.178065603667255,0.81443479676788,0.659880491890142,3.98235415019888,0.242780636154981,0,0.377210159511796,0.885905678642318,1.53717573971964,3.10113951801865,0,0,0.948110273807448,2.10837217149998,3.09406629744561,0,0.900305470156551,0.517434735131018,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0,0.938686832254841,1.69465656691056,9.70324951441832,3.2977250588296,1.61464426695906,2.47282992205439,4.77489376012546,5.58079059133208,0.874442509889552,0.927126510052548,4.44264290074417,1.65109494370578,5.18544676635193,3.39063222608444,5.33107488111998,4.11800711771741,0.339956859987711,0.279902904647316,0.138199973804424,0,1.26534397432454,0.609958401380546,0.648032044930808,0.627264888043406,0.436725127492355,0.269728692769641,1.1571483801547,0.785267825952089,1.29614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.5208175393758,0.419437377702843,0.241584120826006,0.864090018773596,0.316011120628178,1.41907650703115,0.924398614483445,0.649604114888975,0.716106782669926,0.198681354781265,0.360586348559907,0,0.302899349844443,0.0762068066549998,0.403304740547362,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,6.19352168988901,2.38097111547445,0.214368379079066,2.00628841614145,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,2.04880326904961,2.91728060481953,1.67690530102386,0.919217542250071,0.666740183404846,1.03017528619447,1.92551525755089,1.01078884705519,0.50695859978048,1.50901073108861,0.561849044819294,1.15245274328765,0.918967503289812,1.42888107384922,1.0429589335037,1.54327376370964,0.824171801606613,0.883193520806384,0.342869252385415,1.06485483695602,0.476872379894642,0.581385666529314,0.846984423737976,1.52306294205018,0.548783918618318,0.789209134313529,0.814824683075171,2.24456908663095,0.711810108745045,0.886540341380071,0,0.929621047115796,1.35034627686799,0.249810577937946,0.233931608445408,1.71896843238639,0.382576664137687,1.76473135295612,0.695603506861264
|phase1_expression=0.160148847104794,0,0.909998478779072,0,0.500895729946347,0.503637815735669,0.934450562382103,0,0.281577444303333,0.936258105287974,0,0,0,0.0874204024189974,7.99463428357591,5.06188168474565,5.59649502502517,0.157731082679119,0,0,2.38121212422995,0,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0.646413698057667,1.52018735565099,0.504060259519861,0.443461021310609,3.17515336729816,1.23012957516914,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,1.03134418455488,0.404632921719196,0,0.633831403506179,0,0,1.3498495759221,0,0,0,0,0.103689612308478,0.135005938331691,0,1.99955689082663,1.10434270475807,0.122490799214954,0,0,0,1.0214987046815,0.307213066512487,0,0,0,0.837548997004143,0.56276261003168,0.15279824777681,0.294628585473668,0.711858403995515,0.372798891650601,0,0.0755715601067855,22.8992946074325,6.88339101585109,0.679971333707751,1.07940638327563,2.59910566979068,0.448026887097336,1.96622188184453,0,0,0,1.40843419776681,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,1.48439043634778,0,0,1.21439728736295,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0,12.8541383221874,1.01219549843938,0.884610551949874,0.647067399789637,1.10420759230197,1.93950101254089,0,0,0.628340120440365,0.510914110417183,0.239630249011841,0,0.254140454146129,0,0.457500602818626,0.376963056338593,1.04294592115366,0.255715457330331,0.20778804455956,0.162241263067758,1.32391173005411,0.995255764880744,10.108910337347,1.47309299120532,0.650602214813519,0,0.360124259610698,0.90422890701429,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,1.07783996466421,0.567318240503458,0.175951124163949,0,0.278047249225598,1.0447564995665,0.205782136407943,0.199034266818493,0,0.257347907114715,0.568326998791185,3.52113813310353,1.87620847984877,0.540186184383045,0.473489471170421,0.196764231747404,0.771335564436891,1.39520366850245,1.07309360559848,1.40118410840603,0.987359099480883,0.656669856316381,0.0810688095458557,0,0.878200461164203,0.268412837520744,0.630869845692382,0.617427674275707,0.330418782983798,1.32225283331772,0.213288250535234,0.696710015581316,0.902072229254653,1.4117846723634,2.44615848229357,1.90225626112559,0.474529061544512,2.79988223030818,3.51869292320377,6.36660710531683,5.45899443933536,0,0.864552199498777,0.995706366271836,0.569003702859245,0.913988100877831,1.1270773567308,0.814605311381257,0.969762435838129,2.38461787627083,2.78240763346732,2.95220295959204,2.19798218977925,2.09775178667061,2.07516838961004,11.3454671886944,15.3316016188298,15.2906236421701,12.3744674046987,12.0588579876208,6.3656462945355,4.02774592431135,2.91843408195064,3.0201755450689,2.87536413054709,3.72140947668503,4.05648975048929,3.78868316920668,4.66433275156972,0.964887042726734,14.965008403495,0.37898282354097,0.488894929326078,0.848725428875941,0.938760993154008,2.01007508930179,3.80869825417622,4.09780660501378,4.88668946729192,3.10050565508285,4.30527875375215,7.37384916220821,8.11619414769709,8.82359257347221,0,0.54390568381871,12.7858710984949,2.20749397043786,0.481651769963376,0.468846746368813,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.425820255624806,0.178065603667255,0.81443479676788,0.659880491890142,3.98235415019888,0.242780636154981,0,0.377210159511796,0.885905678642318,1.53717573971964,3.10113951801865,0,0,0.948110273807448,2.10837217149998,3.09406629744561,0,0.900305470156551,0.517434735131018,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0,0.938686832254841,1.69465656691056,9.70324951441832,3.2977250588296,1.61464426695906,2.47282992205439,4.77489376012546,5.58079059133208,0.874442509889552,0.927126510052548,4.44264290074417,1.65109494370578,5.18544676635193,3.39063222608444,5.33107488111998,4.11800711771741,0.339956859987711,0.279902904647316,0.138199973804424,0,1.26534397432454,0.609958401380546,0.648032044930808,0.627264888043406,0.436725127492355,0.269728692769641,1.1571483801547,0.785267825952089,1.29614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0.5208175393758,0.419437377702843,0.241584120826006,0.864090018773596,0.316011120628178,1.41907650703115,0.924398614483445,0.649604114888975,0.716106782669926,0.198681354781265,0.360586348559907,0,0.302899349844443,0.0762068066549998,0.403304740547362,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,6.19352168988901,2.38097111547445,0.214368379079066,2.00628841614145,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,2.04880326904961,2.91728060481953,1.67690530102386,0.919217542250071,0.666740183404846,1.03017528619447,1.92551525755089,1.01078884705519,0.50695859978048,1.50901073108861,0.561849044819294,1.15245274328765,0.918967503289812,1.42888107384922,1.0429589335037,1.54327376370964,0.824171801606613,0.883193520806384,0.342869252385415,1.06485483695602,0.476872379894642,0.581385666529314,0.846984423737976,1.52306294205018,0.548783918618318,0.789209134313529,0.814824683075171,2.24456908663095,0.711810108745045,0.886540341380071,0,0.929621047115796,1.35034627686799,0.249810577937946,0.233931608445408,1.71896843238639,0.382576664137687,1.76473135295612,0.695603506861264
|short_description=p3@Slc39a8
|short_description=p3@Slc39a8
}}
}}

Latest revision as of 16:12, 1 October 2015

Short description:p3@Slc39a8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Slc39a8_5end
Coexpression cluster:NA
Association with transcript: 295bp_to_ENSMUST00000029810, uc008rmb.2_5end
EntrezGene:Slc39a8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Slc39a8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A812.85
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F811.35
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E115.29
liver, embryo E15.CNhs10520.433-16D712.37
liver, embryo E16.CNhs10523.462-17F512.06
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B114.97
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H28.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F89.70
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F56.19
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk2.62e-1766
trunk region element2.30e-1679
abdomen element6.05e-1449
abdominal segment element6.05e-1449
abdominal segment of trunk6.05e-1449
abdomen6.05e-1449
trunk7.94e-1490
exocrine gland5.40e-1325
exocrine system5.40e-1325
liver2.04e-1222
epithelial sac2.04e-1222
digestive gland2.04e-1222
epithelium of foregut-midgut junction2.04e-1222
anatomical boundary2.04e-1222
hepatobiliary system2.04e-1222
foregut-midgut junction2.04e-1222
hepatic diverticulum2.04e-1222
liver primordium2.04e-1222
septum transversum2.04e-1222
liver bud2.04e-1222
digestive tract diverticulum1.46e-1123
sac1.46e-1123
epithelial bud9.89e-0817
mesenchyme2.52e-0761
entire embryonic mesenchyme2.52e-0761
epithelial tube3.29e-0747
foregut4.26e-0780
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:135489349..135489384,%2B&oldid=4311071"