FFCP PHASE1:Mm9::chr7:105805025..105805034,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233545 | |EntrezGene=233545 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BMB0 | |UniProt=Q8BMB0 | ||
|association_with_transcript=44bp_to_ENSMUST00000038359,ENSMUST00000098271,ENSMUST00000107106,NM_172280,uc009iko.1,uc009ikp.1,uc009ikq.1,uc009ikr.1_5end | |association_with_transcript=44bp_to_ENSMUST00000038359,ENSMUST00000098271,ENSMUST00000107106,NM_172280,uc009iko.1,uc009ikp.1,uc009ikq.1,uc009ikr.1_5end | ||
|cluster_id=chr7:105805025..105805034,- | |||
|description=CAGE_peak_4_at_2210018M11Rik_5end | |description=CAGE_peak_4_at_2210018M11Rik_5end | ||
|id=chr7:105805025..105805034,- | |id=chr7:105805025..105805034,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.21e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.53e-07,1;UBERON:0001736,5.53e-07,1;UBERON:0003293,5.53e-07,1;UBERON:0003294,5.53e-07,1;UBERON:0001829,5.53e-07,1;UBERON:0010047,5.53e-07,1;UBERON:0000167,5.53e-07,1;UBERON:0006298,5.53e-07,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.645616617207881,4.22366166455,4.68129052643987,0.34243593645101,0.159544317990673,0.342401459862411,0.437102012094987,0,0,0,0.473193248037357,0.274228867211478,0,0.425216450755349,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.837063261473815,0,0,0.588231488031014,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.383062014255563,0.46081959976873,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0.151452386666368,0,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0,0.14084341977668,3.84979432242953,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0.346970653532272,0.913396434936424,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.55759661857696,0.599902730993408,1.14363204365758,0.299581278809645,0.457500602818626,0.251308704225729,0.347648640384553,0.767146371990992,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0,0.612328492361951,0.12811372028485,0.562210347358373,0,0.646703978798527,0.567318240503458,0.175951124163949,0.657587197282725,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.134206418760372,1.26173969138476,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,2.25415471346161,0.407302655690628,0.387904974335251,0.280543279561274,0.189709611372772,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,1.45413491791002,0,0.316036757935816,0,0,0,0,0.129358683782755,0.643011105094777,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0.322928853391811,0.0603129249281559,0,0,0,0.556275906031529,0,0.206386867963223,0,0.188368457004691,0,0,1.01987057996313,2.09927178485487,1.93479963326193,0,0.474503990371703,0.203319467126849,0.432021363287205,0,0,0.539457385539283,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0.448549638131936,0,0.388902376688095,0,0.506868376472335,0,0.2604087696879,0.524296722128554,0.241584120826006,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.596044064343795,0.360586348559907,0.443068581523732,0.807731599585181,0.15241361331,0.504130925684203,0.682205165178267,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0,0,0,0,2.30162618253588,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0.853668028770671,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0,0.38581844092741,0,0.294397840268795,1.02860775715625,0.70990322463735,0.476872379894642,0.290692833264657,0.188218760830661,0.0846146078916765,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0.57386499620653,0.220591419119515,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0.645616617207881,4.22366166455,4.68129052643987,0.34243593645101,0.159544317990673,0.342401459862411,0.437102012094987,0,0,0,0.473193248037357,0.274228867211478,0,0.425216450755349,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.837063261473815,0,0,0.588231488031014,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.34437519656986,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0.244981598429908,0.287536413054709,0,0,0.383062014255563,0.46081959976873,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0.151452386666368,0,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0,0.14084341977668,3.84979432242953,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0.346970653532272,0.913396434936424,0,0.150722640552623,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.55759661857696,0.599902730993408,1.14363204365758,0.299581278809645,0.457500602818626,0.251308704225729,0.347648640384553,0.767146371990992,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0,0.612328492361951,0.12811372028485,0.562210347358373,0,0.646703978798527,0.567318240503458,0.175951124163949,0.657587197282725,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.134206418760372,1.26173969138476,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,2.25415471346161,0.407302655690628,0.387904974335251,0.280543279561274,0.189709611372772,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,1.45413491791002,0,0.316036757935816,0,0,0,0,0.129358683782755,0.643011105094777,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0.322928853391811,0.0603129249281559,0,0,0,0.556275906031529,0,0.206386867963223,0,0.188368457004691,0,0,1.01987057996313,2.09927178485487,1.93479963326193,0,0.474503990371703,0.203319467126849,0.432021363287205,0,0,0.539457385539283,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0.448549638131936,0,0.388902376688095,0,0.506868376472335,0,0.2604087696879,0.524296722128554,0.241584120826006,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.596044064343795,0.360586348559907,0.443068581523732,0.807731599585181,0.15241361331,0.504130925684203,0.682205165178267,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0,0,0,0,2.30162618253588,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0.399024873401031,0.853668028770671,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0,0.38581844092741,0,0.294397840268795,1.02860775715625,0.70990322463735,0.476872379894642,0.290692833264657,0.188218760830661,0.0846146078916765,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0.57386499620653,0.220591419119515,0.231867835620421 | ||
|short_description=p4@2210018M11Rik | |short_description=p4@2210018M11Rik | ||
}} | }} |
Latest revision as of 14:01, 25 September 2015
Short description: | p4@2210018M11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2210018M11Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENSMUST00000038359, ENSMUST00000098271, ENSMUST00000107106, NM_172280, uc009iko.1, uc009ikp.1, uc009ikq.1, uc009ikr.1_5end |
EntrezGene: | 2210018M11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 5.53e-07 | 1 |
submandibular gland | 5.53e-07 | 1 |
gland of oral region | 5.53e-07 | 1 |
gland of foregut | 5.53e-07 | 1 |
major salivary gland | 5.53e-07 | 1 |
oral gland | 5.53e-07 | 1 |
oral cavity | 5.53e-07 | 1 |
submandibular gland primordium | 5.53e-07 | 1 |