FFCP PHASE1:Mm9::chr7:107756070..107756132,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19346 | |EntrezGene=19346 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=P35279,Q3U4W5,Q0PD54,Q0PD53 | |UniProt=P35279,Q3U4W5,Q0PD54,Q0PD53 | ||
|association_with_transcript=0bp_to_ENSMUST00000032946,NM_001163663,NM_024287,uc009ini.2,uc009inj.2_5end | |association_with_transcript=0bp_to_ENSMUST00000032946,NM_001163663,NM_024287,uc009ini.2,uc009inj.2_5end | ||
|cluster_id=chr7:107756070..107756132,+ | |||
|description=CAGE_peak_2_at_Rab6a_5end | |description=CAGE_peak_2_at_Rab6a_5end | ||
|id=chr7:107756070..107756132,+ | |id=chr7:107756070..107756132,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.86e-09!32;CL:0002032!1.86e-09!32;CL:0000037!1.86e-09!32;CL:0000566!1.86e-09!32;CL:0000837!1.86e-09!32;CL:0000838!2.68e-08!12;CL:0002031!6.85e-08!25;CL:0000084!1.15e-07!11;CL:0000827!1.15e-07!11;CL:0000542!2.10e-07!13;CL:0000051!2.10e-07!13;CL:0000791!4.45e-07!9;CL:0000789!4.45e-07!9;CL:0002420!4.45e-07!9;CL:0002419!4.45e-07!9;CL:0000790!4.45e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.86e-09,32;CL:0002032,1.86e-09,32;CL:0000037,1.86e-09,32;CL:0000837,1.86e-09,32;CL:0000838,2.68e-08,12;CL:0002031,6.85e-08,25;CL:0000084,1.15e-07,11;CL:0000827,1.15e-07,11;CL:0000542,2.10e-07,13;CL:0000051,2.10e-07,13;CL:0000791,4.45e-07,9;CL:0000789,4.45e-07,9;CL:0002420,4.45e-07,9;CL:0002419,4.45e-07,9;CL:0000790,4.45e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.19e-10!48;UBERON:0002390!2.76e-09!45;UBERON:0003061!2.76e-09!45;UBERON:0004177!3.67e-09!29;UBERON:0002405!7.00e-08!70;UBERON:0000064!2.69e-07!99;UBERON:0002370!7.65e-07!23;UBERON:0000974!7.65e-07!23;UBERON:0004807!7.65e-07!23;UBERON:0005058!7.65e-07!23;UBERON:0003351!7.65e-07!23;UBERON:0009113!7.65e-07!23;UBERON:0003295!7.65e-07!23;UBERON:0009722!7.65e-07!23;UBERON:0005562!7.65e-07!23;UBERON:0007690!7.65e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.19e-10,48;UBERON:0002405,9.19e-10,48;UBERON:0002390,2.76e-09,45;UBERON:0003061,2.76e-09,45;UBERON:0004177,3.67e-09,29;UBERON:0005057,3.67e-09,29;UBERON:0000077,5.58e-08,35;UBERON:0002370,7.65e-07,23;UBERON:0000974,7.65e-07,23;UBERON:0004807,7.65e-07,23;UBERON:0005058,7.65e-07,23;UBERON:0003351,7.65e-07,23;UBERON:0009113,7.65e-07,23;UBERON:0003295,7.65e-07,23;UBERON:0009722,7.65e-07,23;UBERON:0005562,7.65e-07,23;UBERON:0007690,7.65e-07,23 | |||
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| ||
|short_description=p2@Rab6a | |short_description=p2@Rab6a | ||
}} | }} |
Latest revision as of 14:53, 25 September 2015
Short description: | p2@Rab6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000032946, NM_001163663, NM_024287, uc009ini.2, uc009inj.2_5end |
EntrezGene: | Rab6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.86e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.86e-09 | 32 |
hematopoietic stem cell | 1.86e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.86e-09 | 32 |
lymphoid lineage restricted progenitor cell | 2.68e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 6.85e-08 | 25 |
T cell | 1.15e-07 | 11 |
pro-T cell | 1.15e-07 | 11 |
lymphocyte | 2.10e-07 | 13 |
common lymphoid progenitor | 2.10e-07 | 13 |
mature alpha-beta T cell | 4.45e-07 | 9 |
alpha-beta T cell | 4.45e-07 | 9 |
immature T cell | 4.45e-07 | 9 |
mature T cell | 4.45e-07 | 9 |
immature alpha-beta T cell | 4.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.19e-10 | 48 |
immune system | 9.19e-10 | 48 |
hematopoietic system | 2.76e-09 | 45 |
blood island | 2.76e-09 | 45 |
hemopoietic organ | 3.67e-09 | 29 |
immune organ | 3.67e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 5.58e-08 | 35 |
thymus | 7.65e-07 | 23 |
neck | 7.65e-07 | 23 |
respiratory system epithelium | 7.65e-07 | 23 |
hemolymphoid system gland | 7.65e-07 | 23 |
pharyngeal epithelium | 7.65e-07 | 23 |
thymic region | 7.65e-07 | 23 |
pharyngeal gland | 7.65e-07 | 23 |
entire pharyngeal arch endoderm | 7.65e-07 | 23 |
thymus primordium | 7.65e-07 | 23 |
early pharyngeal endoderm | 7.65e-07 | 23 |