FFCP PHASE1:Mm9::chr15:30103246..30103251,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:30103246..30103251,- | |||
|description=CAGE_peak_at_chr15:30103246..30103251,- | |description=CAGE_peak_at_chr15:30103246..30103251,- | ||
|id=chr15:30103246..30103251,- | |id=chr15:30103246..30103251,- | ||
|ontology_enrichment_celltype=CL:0000117!1.06e-19!23;CL:0000337!1.06e-19!23;CL:0000540!5.41e-18!33;CL:0000047!5.41e-18!33;CL:0000031!5.41e-18!33;CL:0000404!5.41e-18!33;CL:0000221!1.50e-15!44;CL:0000133!1.50e-15!44;CL:0000393!1.90e-14!39;CL:0000211!1.90e-14!39;CL:0002319!2.95e-14!43;CL:0000055!1.57e-11!50;CL:0002609!6.56e-09!6;CL:0002321!8.75e-08!70;CL:0000220!8.75e-08!70;CL:0002612!3.91e-07!3;CL:0002613!8.48e-07!3 | |ontology_enrichment_celltype=CL:0000117!1.06e-19!23;CL:0000337!1.06e-19!23;CL:0000540!5.41e-18!33;CL:0000047!5.41e-18!33;CL:0000031!5.41e-18!33;CL:0000404!5.41e-18!33;CL:0000221!1.50e-15!44;CL:0000133!1.50e-15!44;CL:0000393!1.90e-14!39;CL:0000211!1.90e-14!39;CL:0002319!2.95e-14!43;CL:0000055!1.57e-11!50;CL:0002609!6.56e-09!6;CL:0002321!8.75e-08!70;CL:0000220!8.75e-08!70;CL:0002612!3.91e-07!3;CL:0002613!8.48e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.62e-27,6;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.97e-12!73;UBERON:0005743!1.97e-12!73;UBERON:0004121!5.15e-12!102;UBERON:0000924!5.15e-12!102;UBERON:0006601!5.15e-12!102;UBERON:0002020!5.30e-12!34;UBERON:0000073!6.37e-12!75;UBERON:0001016!6.37e-12!75;UBERON:0000033!2.02e-10!63;UBERON:0002346!6.56e-10!71;UBERON:0003075!6.56e-10!71;UBERON:0007284!6.56e-10!71;UBERON:0001049!1.77e-08!52;UBERON:0005068!1.77e-08!52;UBERON:0006241!1.77e-08!52;UBERON:0007135!1.77e-08!52;UBERON:0003056!2.98e-08!49;UBERON:0002791!1.01e-07!29;UBERON:0003528!1.01e-07!29;UBERON:0001893!1.01e-07!29;UBERON:0002257!3.91e-07!3;UBERON:0001948!4.27e-07!5;UBERON:0002315!4.27e-07!5;UBERON:0007811!6.82e-07!86;UBERON:0000369!8.97e-07!5;UBERON:0002435!8.97e-07!5;UBERON:0000204!8.97e-07!5;UBERON:0010082!8.97e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!1.97e-12!73;UBERON:0005743!1.97e-12!73;UBERON:0004121!5.15e-12!102;UBERON:0000924!5.15e-12!102;UBERON:0006601!5.15e-12!102;UBERON:0002020!5.30e-12!34;UBERON:0000073!6.37e-12!75;UBERON:0001016!6.37e-12!75;UBERON:0000033!2.02e-10!63;UBERON:0002346!6.56e-10!71;UBERON:0003075!6.56e-10!71;UBERON:0007284!6.56e-10!71;UBERON:0001049!1.77e-08!52;UBERON:0005068!1.77e-08!52;UBERON:0006241!1.77e-08!52;UBERON:0007135!1.77e-08!52;UBERON:0003056!2.98e-08!49;UBERON:0002791!1.01e-07!29;UBERON:0003528!1.01e-07!29;UBERON:0001893!1.01e-07!29;UBERON:0002257!3.91e-07!3;UBERON:0001948!4.27e-07!5;UBERON:0002315!4.27e-07!5;UBERON:0007811!6.82e-07!86;UBERON:0000369!8.97e-07!5;UBERON:0002435!8.97e-07!5;UBERON:0000204!8.97e-07!5;UBERON:0010082!8.97e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.64e-09,49;UBERON:0000970,1.20e-08,9;UBERON:0000019,1.20e-08,9;UBERON:0000047,1.20e-08,9;UBERON:0010312,1.20e-08,9;UBERON:0004088,1.20e-08,9;UBERON:0002104,1.20e-08,9;UBERON:0001456,1.20e-08,9;UBERON:0003072,1.20e-08,9;UBERON:0004128,1.20e-08,9;UBERON:0003071,1.20e-08,9;UBERON:0000956,2.43e-08,21;UBERON:0001869,2.43e-08,21;UBERON:0000203,2.43e-08,21;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0001444,3.00e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.07379224616955,1.62007125998029,1.47227472945967,0,0.441737081903227,0.489963196859816,0.0958454710182364,0,0,0,0.307213066512487,0.263772575460388,0.457438218012048,0.52091337055676,0,0,0.30559649555362,0.294628585473668,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.376963056338593,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.60281927134286,1.15662048557257,1.15302348256365,0.655912071918102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.07379224616955,1.62007125998029,1.47227472945967,0,0.441737081903227,0.489963196859816,0.0958454710182364,0,0,0,0.307213066512487,0.263772575460388,0.457438218012048,0.52091337055676,0,0,0.30559649555362,0.294628585473668,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.376963056338593,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.60281927134286,1.15662048557257,1.15302348256365,0.655912071918102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr15:30103246..30103251,- | |short_description=p@chr15:30103246..30103251,- | ||
}} | }} |
Latest revision as of 03:52, 5 August 2015
Short description: | p@chr15:30103246..30103251, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:30103246..30103251, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.62e-27 | 6 |
CNS neuron (sensu Vertebrata) | 1.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.64e-09 | 49 |
eye | 1.20e-08 | 9 |
camera-type eye | 1.20e-08 | 9 |
simple eye | 1.20e-08 | 9 |
immature eye | 1.20e-08 | 9 |
ocular region | 1.20e-08 | 9 |
visual system | 1.20e-08 | 9 |
face | 1.20e-08 | 9 |
optic cup | 1.20e-08 | 9 |
optic vesicle | 1.20e-08 | 9 |
eye primordium | 1.20e-08 | 9 |
cerebral cortex | 2.43e-08 | 21 |
cerebral hemisphere | 2.43e-08 | 21 |
pallium | 2.43e-08 | 21 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
subdivision of head | 3.00e-07 | 11 |