FFCP PHASE1:Mm9::chr5:89666281..89666294,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=438 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:89666281..89666294,+ | |||
|description=CAGE_peak_at_chr5:89666281..89666294,+ | |description=CAGE_peak_at_chr5:89666281..89666294,+ | ||
|id=chr5:89666281..89666294,+ | |id=chr5:89666281..89666294,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.06e-14!23;CL:0000337!9.06e-14!23;CL:0002319!4.69e-10!43;CL:0000221!8.76e-10!44;CL:0000133!8.76e-10!44;CL:0000540!3.58e-09!33;CL:0000047!3.58e-09!33;CL:0000031!3.58e-09!33;CL:0000404!3.58e-09!33;CL:0000055!2.20e-08!50;CL:0002321!6.79e-08!70;CL:0000220!6.79e-08!70;CL:0000393!1.52e-07!39;CL:0000211!1.52e-07!39;CL:0002612!7.10e-07!3;CL:0002610!8.07e-07!3 | |ontology_enrichment_celltype=CL:0000117!9.06e-14!23;CL:0000337!9.06e-14!23;CL:0002319!4.69e-10!43;CL:0000221!8.76e-10!44;CL:0000133!8.76e-10!44;CL:0000540!3.58e-09!33;CL:0000047!3.58e-09!33;CL:0000031!3.58e-09!33;CL:0000404!3.58e-09!33;CL:0000055!2.20e-08!50;CL:0002321!6.79e-08!70;CL:0000220!6.79e-08!70;CL:0000393!1.52e-07!39;CL:0000211!1.52e-07!39;CL:0002612!7.10e-07!3;CL:0002610!8.07e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,5.64e-30,3;CL:0002610,1.10e-29,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!4.04e-12!12;UBERON:0003057!4.04e-12!12;UBERON:0000489!8.75e-09!21;UBERON:0001948!1.85e-08!5;UBERON:0002315!1.85e-08!5;UBERON:0001017!2.05e-07!73;UBERON:0005743!2.05e-07!73;UBERON:0000073!3.72e-07!75;UBERON:0001016!3.72e-07!75;UBERON:0002240!4.08e-07!6;UBERON:0005174!4.08e-07!6;UBERON:0001137!4.08e-07!6;UBERON:0002257!7.10e-07!3;UBERON:0004684!8.07e-07!3;UBERON:0002275!8.07e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,5.64e-30,3;UBERON:0004684,1.10e-29,3;UBERON:0002275,1.10e-29,3;UBERON:0001948,1.74e-18,5;UBERON:0002315,1.74e-18,5;UBERON:0002240,1.34e-15,6;UBERON:0005174,1.34e-15,6;UBERON:0001137,1.34e-15,6;UBERON:0003076,2.45e-08,12;UBERON:0003057,2.45e-08,12;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,1.40456071893706,2.15049146558741,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,2.94628585473668,1.70846016958924,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,1.40456071893706,2.15049146558741,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,2.94628585473668,1.70846016958924,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr5:89666281..89666294,+ | |short_description=p@chr5:89666281..89666294,+ | ||
}} | }} |
Latest revision as of 17:36, 4 August 2015
Short description: | p@chr5:89666281..89666294, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:89666281..89666294, + |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 5.64e-30 | 3 |
raphe nuclei neuron | 1.10e-29 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 5.64e-30 | 3 |
raphe nuclei | 1.10e-29 | 3 |
reticular formation | 1.10e-29 | 3 |
regional part of spinal cord | 1.74e-18 | 5 |
gray matter of spinal cord | 1.74e-18 | 5 |
spinal cord | 1.34e-15 | 6 |
dorsal region element | 1.34e-15 | 6 |
dorsum | 1.34e-15 | 6 |
posterior neural tube | 2.45e-08 | 12 |
chordal neural plate | 2.45e-08 | 12 |
regional part of nervous system | 2.91e-07 | 54 |