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FFCP PHASE1:Mm9::chr6:121081031..121081067,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=194401
|EntrezGene=194401
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-14bp_to_uc009dob.1_5end
|association_with_transcript=-14bp_to_uc009dob.1_5end
|cluster_id=chr6:121081031..121081067,-
|description=CAGE_peak_2_at_Mical3_5end
|description=CAGE_peak_2_at_Mical3_5end
|id=chr6:121081031..121081067,-
|id=chr6:121081031..121081067,-
|ontology_enrichment_celltype=CL:0000117!1.80e-14!23;CL:0000337!1.80e-14!23;CL:0000540!2.98e-14!33;CL:0000047!2.98e-14!33;CL:0000031!2.98e-14!33;CL:0000404!2.98e-14!33;CL:0002319!4.01e-10!43;CL:0000221!4.30e-10!44;CL:0000133!4.30e-10!44;CL:0000393!4.72e-10!39;CL:0000211!4.72e-10!39;CL:0000055!6.61e-07!50
|ontology_enrichment_celltype=CL:0000117!1.80e-14!23;CL:0000337!1.80e-14!23;CL:0000540!2.98e-14!33;CL:0000047!2.98e-14!33;CL:0000031!2.98e-14!33;CL:0000404!2.98e-14!33;CL:0002319!4.01e-10!43;CL:0000221!4.30e-10!44;CL:0000133!4.30e-10!44;CL:0000393!4.72e-10!39;CL:0000211!4.72e-10!39;CL:0000055!6.61e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-18,23;CL:0000337,1.62e-18,23;CL:0000540,2.27e-15,33;CL:0000047,2.27e-15,33;CL:0000031,2.27e-15,33;CL:0000404,2.27e-15,33;CL:0000393,2.44e-11,39;CL:0000211,2.44e-11,39;CL:0002319,2.43e-09,43;CL:0000221,6.60e-09,44;CL:0000133,6.60e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.65e-28!73;UBERON:0005743!1.65e-28!73;UBERON:0002346!1.46e-27!71;UBERON:0003075!1.46e-27!71;UBERON:0007284!1.46e-27!71;UBERON:0000073!3.01e-27!75;UBERON:0001016!3.01e-27!75;UBERON:0004121!2.86e-26!102;UBERON:0000924!2.86e-26!102;UBERON:0006601!2.86e-26!102;UBERON:0001049!2.35e-25!52;UBERON:0005068!2.35e-25!52;UBERON:0006241!2.35e-25!52;UBERON:0007135!2.35e-25!52;UBERON:0000955!3.82e-24!50;UBERON:0006238!3.82e-24!50;UBERON:0000033!1.88e-23!63;UBERON:0002616!2.35e-23!49;UBERON:0003056!1.02e-21!49;UBERON:0003080!2.43e-20!40;UBERON:0002780!1.23e-19!39;UBERON:0001890!1.23e-19!39;UBERON:0006240!1.23e-19!39;UBERON:0002020!1.24e-19!34;UBERON:0002791!1.09e-16!29;UBERON:0003528!1.09e-16!29;UBERON:0001893!1.09e-16!29;UBERON:0000956!1.03e-11!21;UBERON:0001869!1.03e-11!21;UBERON:0000203!1.03e-11!21;UBERON:0007811!1.45e-09!86;UBERON:0002619!1.65e-09!17;UBERON:0002021!3.71e-08!10;UBERON:0000411!3.71e-08!10;UBERON:0001950!3.71e-08!10;UBERON:0000153!5.41e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.52e-32,54;UBERON:0002346,2.27e-32,64;UBERON:0003075,2.27e-32,64;UBERON:0007284,2.27e-32,64;UBERON:0001017,7.45e-32,73;UBERON:0001049,5.08e-31,52;UBERON:0005068,5.08e-31,52;UBERON:0006241,5.08e-31,52;UBERON:0007135,5.08e-31,52;UBERON:0001016,2.36e-30,75;UBERON:0000955,2.74e-27,47;UBERON:0006238,2.74e-27,47;UBERON:0002616,2.78e-26,46;UBERON:0003056,5.79e-26,49;UBERON:0003080,9.50e-26,40;UBERON:0010371,1.40e-25,73;UBERON:0004121,4.24e-25,95;UBERON:0000924,4.24e-25,95;UBERON:0006601,4.24e-25,95;UBERON:0002780,7.97e-25,39;UBERON:0001890,7.97e-25,39;UBERON:0006240,7.97e-25,39;UBERON:0002020,8.63e-25,34;UBERON:0003528,6.32e-21,29;UBERON:0002791,6.32e-21,29;UBERON:0001893,6.32e-21,29;UBERON:0010314,2.72e-19,92;UBERON:0000956,2.07e-14,21;UBERON:0001869,2.07e-14,21;UBERON:0000203,2.07e-14,21;UBERON:0002619,1.59e-11,17;UBERON:0002021,3.17e-10,10;UBERON:0000411,3.17e-10,10;UBERON:0001950,3.17e-10,10;UBERON:0002420,1.01e-07,8;UBERON:0007245,1.01e-07,8;UBERON:0010009,1.01e-07,8;UBERON:0010011,1.01e-07,8;UBERON:0000454,1.01e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.659058548203415,0,0.55994568650145,0,0,0,0,0,0,0.515672092277442,27.5150386769053,32.797440714866,31.0577387718028,0,0.889294796111139,0,0,0,0.299600110518405,0,10.0578923939223,13.9056116481641,11.7781978356774,9.42648248532552,11.4851641294839,15.4338407010842,19.073248732629,17.4651569455904,13.2139057199266,8.04430229936683,9.67721159514334,28.2236655742615,29.2760459527711,26.045668527838,8.65467296904281,11.2552522006336,11.7654650788144,17.0884579574727,20.5015220350708,18.6399445825301,0,0.226714680320357,2.02905142091174,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,1.82679286987285,1.15307748628029,1.80867168663147,1.41106448562846,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0,0,9.36898550436951,5.23616767033638,0.766371165625774,0,0,0,25.7639899776295,21.5025283324754,31.1622793239904,26.5951209894183,24.2929684463814,14.1295870300501,18.1710214635889,0.712875546952214,0,0,0.631325567659422,0.650602214813519,1.14951052216736,3.06105620669094,2.56198190320716,5.44291993210623,3.97152532883034,4.77878795254617,3.10444044886819,0,0.756424320671277,1.75951124163949,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,1.42046841351126,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.583826711835847,0.822799249567402,0,0.405344047729279,0,0,0,16.8231958851302,15.9502149187891,0.330418782983798,0,0.213288250535234,1.16118335930219,1.67527699718721,1.21010114774006,0.889512175379481,0.380451252225118,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.252946148497029,0.147610147979602,0.784993639206874,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.482443521363367,0,1.13694847062291,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,9.15138362930414,10.0802050469295,0,0.252470927204373,2.52406575533005,1.56175497718655,1.93881057959519,0.477937595905104,1.11399337041197,0.849229592366497,1.61924280669958,0.876767573733936,2.76701444562566,31.4894890093371,7.2389443456217,0,0,14.0224604526655,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,1.26414703174326,0,1.03135543248187,6.80879211507576,1.62054984628179,2.32845630808958,2.35770738534752,3.3694644392032,4.28085162244969,2.96188237083818,4.87143918583359,0.23467170806371,0,0.441056796109924,0.49465875882444,0.322928853391811,0.361877549568935,0,0.656563598980245,0,8.52956389248344,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0.844780627453891,0,0.13020438484395,0.943734099831398,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,0,0,0,0.579568782096571,1.87682475451182,10.0733393346996,1.71494703263253,0,39.5326289831947,26.2385384809091,31.5092532391668,18.0445841460872,32.1988784292202,25.6833925112498,21.6007200074178,23.4167025676595,30.3605414019417,23.8169743405837,1.24544817101012,6.78342284781753,4.78054096111576,4.86213434136588,3.98265008993166,3.67687016900028,3.11145418922261,6.59312183164461,7.38114182061175,6.06473308233114,5.0695859978048,5.84741658296836,5.24392441831341,6.14641463086745,5.57124048869449,3.33405583898152,5.79421629724277,4.43691207066522,7.41754621445952,6.62395140604788,4.11443102862498,3.54951612318675,5.48403236878838,5.23247099876383,5.8347815857505,5.58456412085065,4.57319932181931,5.5244639401947,5.83957689537206,6.73370725989286,5.69448086996036,5.61475549540712,4.09231043169689,5.26785260032284,3.08650577569826,14.4890135204009,4.44470056046276,4.51229213501426,1.14772999241306,0,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.659058548203415,0,0.55994568650145,0,0,0,0,0,0,0.515672092277442,27.5150386769053,32.797440714866,31.0577387718028,0,0.889294796111139,0,0,0,0.299600110518405,0,10.0578923939223,13.9056116481641,11.7781978356774,9.42648248532552,11.4851641294839,15.4338407010842,19.073248732629,17.4651569455904,13.2139057199266,8.04430229936683,9.67721159514334,28.2236655742615,29.2760459527711,26.045668527838,8.65467296904281,11.2552522006336,11.7654650788144,17.0884579574727,20.5015220350708,18.6399445825301,0,0.226714680320357,2.02905142091174,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.520455980298408,1.82679286987285,1.15307748628029,1.80867168663147,1.41106448562846,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0,0,9.36898550436951,5.23616767033638,0.766371165625774,0,0,0,25.7639899776295,21.5025283324754,31.1622793239904,26.5951209894183,24.2929684463814,14.1295870300501,18.1710214635889,0.712875546952214,0,0,0.631325567659422,0.650602214813519,1.14951052216736,3.06105620669094,2.56198190320716,5.44291993210623,3.97152532883034,4.77878795254617,3.10444044886819,0,0.756424320671277,1.75951124163949,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,1.42046841351126,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.583826711835847,0.822799249567402,0,0.405344047729279,0,0,0,16.8231958851302,15.9502149187891,0.330418782983798,0,0.213288250535234,1.16118335930219,1.67527699718721,1.21010114774006,0.889512175379481,0.380451252225118,0,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.252946148497029,0.147610147979602,0.784993639206874,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.482443521363367,0,1.13694847062291,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,9.15138362930414,10.0802050469295,0,0.252470927204373,2.52406575533005,1.56175497718655,1.93881057959519,0.477937595905104,1.11399337041197,0.849229592366497,1.61924280669958,0.876767573733936,2.76701444562566,31.4894890093371,7.2389443456217,0,0,14.0224604526655,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,1.26414703174326,0,1.03135543248187,6.80879211507576,1.62054984628179,2.32845630808958,2.35770738534752,3.3694644392032,4.28085162244969,2.96188237083818,4.87143918583359,0.23467170806371,0,0.441056796109924,0.49465875882444,0.322928853391811,0.361877549568935,0,0.656563598980245,0,8.52956389248344,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0.844780627453891,0,0.13020438484395,0.943734099831398,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,0,0,0,0.579568782096571,1.87682475451182,10.0733393346996,1.71494703263253,0,39.5326289831947,26.2385384809091,31.5092532391668,18.0445841460872,32.1988784292202,25.6833925112498,21.6007200074178,23.4167025676595,30.3605414019417,23.8169743405837,1.24544817101012,6.78342284781753,4.78054096111576,4.86213434136588,3.98265008993166,3.67687016900028,3.11145418922261,6.59312183164461,7.38114182061175,6.06473308233114,5.0695859978048,5.84741658296836,5.24392441831341,6.14641463086745,5.57124048869449,3.33405583898152,5.79421629724277,4.43691207066522,7.41754621445952,6.62395140604788,4.11443102862498,3.54951612318675,5.48403236878838,5.23247099876383,5.8347815857505,5.58456412085065,4.57319932181931,5.5244639401947,5.83957689537206,6.73370725989286,5.69448086996036,5.61475549540712,4.09231043169689,5.26785260032284,3.08650577569826,14.4890135204009,4.44470056046276,4.51229213501426,1.14772999241306,0,0.695603506861264
|short_description=p2@Mical3
|short_description=p2@Mical3
}}
}}

Latest revision as of 14:03, 26 September 2015

Short description:p2@Mical3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mical3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -14bp_to_uc009dob.1_5end
EntrezGene:Mical3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mical3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C327.52
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A425.76
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F131.16
cortex, adult.CNhs10473.12-14D526.60
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C65.44
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.82
hippocampus, neonate N00.CNhs11228.627-43G115.95
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A310.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I931.49
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G614.02
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E510.07
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A139.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I514.49
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.62e-1823
neuroblast (sensu Vertebrata)1.62e-1823
neuron2.27e-1533
neuronal stem cell2.27e-1533
neuroblast2.27e-1533
electrically signaling cell2.27e-1533
electrically responsive cell2.44e-1139
electrically active cell2.44e-1139
neural cell2.43e-0943
ectodermal cell6.60e-0944
neurectodermal cell6.60e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.52e-3254
neurectoderm2.27e-3264
neural plate2.27e-3264
presumptive neural plate2.27e-3264
central nervous system7.45e-3273
neural tube5.08e-3152
neural rod5.08e-3152
future spinal cord5.08e-3152
neural keel5.08e-3152
nervous system2.36e-3075
brain2.74e-2747
future brain2.74e-2747
regional part of brain2.78e-2646
pre-chordal neural plate5.79e-2649
anterior neural tube9.50e-2640
ecto-epithelium1.40e-2573
ectoderm-derived structure4.24e-2595
ectoderm4.24e-2595
presumptive ectoderm4.24e-2595
regional part of forebrain7.97e-2539
forebrain7.97e-2539
future forebrain7.97e-2539
gray matter8.63e-2534
brain grey matter6.32e-2129
regional part of telencephalon6.32e-2129
telencephalon6.32e-2129
structure with developmental contribution from neural crest2.72e-1992
cerebral cortex2.07e-1421
cerebral hemisphere2.07e-1421
pallium2.07e-1421
regional part of cerebral cortex1.59e-1117
occipital lobe3.17e-1010
visual cortex3.17e-1010
neocortex3.17e-1010
basal ganglion1.01e-078
nuclear complex of neuraxis1.01e-078
aggregate regional part of brain1.01e-078
collection of basal ganglia1.01e-078
cerebral subcortex1.01e-078
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