FFCP PHASE1:Mm9::chr17:34259256..34259320,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14312 | |EntrezGene=14312 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q7JJ13 | |UniProt=Q7JJ13 | ||
|association_with_transcript=0bp_to_ENSMUST00000025193_5end | |association_with_transcript=0bp_to_ENSMUST00000025193_5end | ||
|cluster_id=chr17:34259256..34259320,- | |||
|description=CAGE_peak_3_at_Brd2_5end | |description=CAGE_peak_3_at_Brd2_5end | ||
|id=chr17:34259256..34259320,- | |id=chr17:34259256..34259320,- | ||
|ontology_enrichment_celltype=CL:0000540!8.79e-14!33;CL:0000047!8.79e-14!33;CL:0000031!8.79e-14!33;CL:0000404!8.79e-14!33;CL:0000117!2.75e-13!23;CL:0000337!2.75e-13!23;CL:0000221!3.98e-11!44;CL:0000133!3.98e-11!44;CL:0002319!4.07e-11!43;CL:0000393!7.33e-09!39;CL:0000211!7.33e-09!39;CL:0000055!7.13e-07!50 | |ontology_enrichment_celltype=CL:0000540!8.79e-14!33;CL:0000047!8.79e-14!33;CL:0000031!8.79e-14!33;CL:0000404!8.79e-14!33;CL:0000117!2.75e-13!23;CL:0000337!2.75e-13!23;CL:0000221!3.98e-11!44;CL:0000133!3.98e-11!44;CL:0002319!4.07e-11!43;CL:0000393!7.33e-09!39;CL:0000211!7.33e-09!39;CL:0000055!7.13e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.79e-14,33;CL:0000047,8.79e-14,33;CL:0000031,8.79e-14,33;CL:0000404,8.79e-14,33;CL:0000117,2.75e-13,23;CL:0000337,2.75e-13,23;CL:0000221,3.98e-11,44;CL:0000133,3.98e-11,44;CL:0002319,4.07e-11,43;CL:0000393,7.49e-09,39;CL:0000211,7.49e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.16e-24!73;UBERON:0005743!1.16e-24!73;UBERON:0000073!1.53e-22!75;UBERON:0001016!1.53e-22!75;UBERON:0001049!1.66e-18!52;UBERON:0005068!1.66e-18!52;UBERON:0006241!1.66e-18!52;UBERON:0007135!1.66e-18!52;UBERON:0000955!6.87e-18!50;UBERON:0006238!6.87e-18!50;UBERON:0002020!1.91e-17!34;UBERON:0002616!2.19e-17!49;UBERON:0004121!2.87e-17!102;UBERON:0000924!2.87e-17!102;UBERON:0006601!2.87e-17!102;UBERON:0002346!6.49e-16!71;UBERON:0003075!6.49e-16!71;UBERON:0007284!6.49e-16!71;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000033!2.18e-15!63;UBERON:0003080!3.11e-15!40;UBERON:0002791!4.90e-15!29;UBERON:0003528!4.90e-15!29;UBERON:0001893!4.90e-15!29;UBERON:0003056!1.41e-13!49;UBERON:0000956!7.17e-11!21;UBERON:0001869!7.17e-11!21;UBERON:0000203!7.17e-11!21;UBERON:0002619!7.52e-09!17;UBERON:0007811!3.79e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!1.16e-24!73;UBERON:0005743!1.16e-24!73;UBERON:0000073!1.53e-22!75;UBERON:0001016!1.53e-22!75;UBERON:0001049!1.66e-18!52;UBERON:0005068!1.66e-18!52;UBERON:0006241!1.66e-18!52;UBERON:0007135!1.66e-18!52;UBERON:0000955!6.87e-18!50;UBERON:0006238!6.87e-18!50;UBERON:0002020!1.91e-17!34;UBERON:0002616!2.19e-17!49;UBERON:0004121!2.87e-17!102;UBERON:0000924!2.87e-17!102;UBERON:0006601!2.87e-17!102;UBERON:0002346!6.49e-16!71;UBERON:0003075!6.49e-16!71;UBERON:0007284!6.49e-16!71;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000033!2.18e-15!63;UBERON:0003080!3.11e-15!40;UBERON:0002791!4.90e-15!29;UBERON:0003528!4.90e-15!29;UBERON:0001893!4.90e-15!29;UBERON:0003056!1.41e-13!49;UBERON:0000956!7.17e-11!21;UBERON:0001869!7.17e-11!21;UBERON:0000203!7.17e-11!21;UBERON:0002619!7.52e-09!17;UBERON:0007811!3.79e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-24,73;UBERON:0001016,1.53e-22,75;UBERON:0000073,6.63e-20,54;UBERON:0001049,1.66e-18,52;UBERON:0005068,1.66e-18,52;UBERON:0006241,1.66e-18,52;UBERON:0007135,1.66e-18,52;UBERON:0004121,3.54e-18,95;UBERON:0000924,3.54e-18,95;UBERON:0006601,3.54e-18,95;UBERON:0002020,1.91e-17,34;UBERON:0002346,2.63e-17,64;UBERON:0003075,2.63e-17,64;UBERON:0007284,2.63e-17,64;UBERON:0000955,3.33e-16,47;UBERON:0006238,3.33e-16,47;UBERON:0002616,1.04e-15,46;UBERON:0002780,1.84e-15,39;UBERON:0001890,1.84e-15,39;UBERON:0006240,1.84e-15,39;UBERON:0010371,2.11e-15,73;UBERON:0003080,3.11e-15,40;UBERON:0003528,4.90e-15,29;UBERON:0002791,4.90e-15,29;UBERON:0001893,4.90e-15,29;UBERON:0003056,1.41e-13,49;UBERON:0010314,2.45e-12,92;UBERON:0000956,7.17e-11,21;UBERON:0001869,7.17e-11,21;UBERON:0000203,7.17e-11,21;UBERON:0002619,7.52e-09,17 | |||
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| ||
|short_description=p3@Brd2 | |short_description=p3@Brd2 | ||
}} | }} |
Latest revision as of 07:33, 26 September 2015
Short description: | p3@Brd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Brd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000025193_5end |
EntrezGene: | Brd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.79e-14 | 33 |
neuronal stem cell | 8.79e-14 | 33 |
neuroblast | 8.79e-14 | 33 |
electrically signaling cell | 8.79e-14 | 33 |
CNS neuron (sensu Vertebrata) | 2.75e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.75e-13 | 23 |
ectodermal cell | 3.98e-11 | 44 |
neurectodermal cell | 3.98e-11 | 44 |
neural cell | 4.07e-11 | 43 |
electrically responsive cell | 7.49e-09 | 39 |
electrically active cell | 7.49e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.16e-24 | 73 |
nervous system | 1.53e-22 | 75 |
regional part of nervous system | 6.63e-20 | 54 |
neural tube | 1.66e-18 | 52 |
neural rod | 1.66e-18 | 52 |
future spinal cord | 1.66e-18 | 52 |
neural keel | 1.66e-18 | 52 |
ectoderm-derived structure | 3.54e-18 | 95 |
ectoderm | 3.54e-18 | 95 |
presumptive ectoderm | 3.54e-18 | 95 |
gray matter | 1.91e-17 | 34 |
neurectoderm | 2.63e-17 | 64 |
neural plate | 2.63e-17 | 64 |
presumptive neural plate | 2.63e-17 | 64 |
brain | 3.33e-16 | 47 |
future brain | 3.33e-16 | 47 |
regional part of brain | 1.04e-15 | 46 |
regional part of forebrain | 1.84e-15 | 39 |
forebrain | 1.84e-15 | 39 |
future forebrain | 1.84e-15 | 39 |
ecto-epithelium | 2.11e-15 | 73 |
anterior neural tube | 3.11e-15 | 40 |
brain grey matter | 4.90e-15 | 29 |
regional part of telencephalon | 4.90e-15 | 29 |
telencephalon | 4.90e-15 | 29 |
pre-chordal neural plate | 1.41e-13 | 49 |
structure with developmental contribution from neural crest | 2.45e-12 | 92 |
cerebral cortex | 7.17e-11 | 21 |
cerebral hemisphere | 7.17e-11 | 21 |
pallium | 7.17e-11 | 21 |
regional part of cerebral cortex | 7.52e-09 | 17 |