Swissregulon:DMAP1 NCOR(1,2) SMARC.p1: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{SwissregulonMotif
|datasource=http://www.swissregulon.unibas.ch/
|name=DMAP1_NCOR{1,2}_SMARC.p1
|associated_transcription_factors=1.000:6594:SMARCA1:SWI/SNF related, matr...") |
No edit summary |
||
Line 4: | Line 4: | ||
|associated_transcription_factors=1.000:6594:SMARCA1:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1::NM_139035:SNF2LB,NURF140,ISWI,SWI;1.000:6601:SMARCC2:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2::NM_139067:BAF170,Rsc8,CRACC2;1.000:8467:SMARCA5:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5::NM_003601:hSNF2H,hISWI,ISWI;1.000:9611:NCOR1:nuclear receptor co-repressor 1::NM_006311:N-CoR,hCIT529I10,TRAC1,hN-CoR,KIAA1047,MGC104216;1.000:9612:NCOR2:nuclear receptor co-repressor 2::NM_001077261:SMRT,SMRTE,TRAC-1,CTG26,TNRC14;1.000:55929:DMAP1:DNA methyltransferase 1 associated protein 1::NM_001034024:DNMAP1,FLJ11543,KIAA1425,DNMTAP1,EAF2,SWC4 | |associated_transcription_factors=1.000:6594:SMARCA1:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1::NM_139035:SNF2LB,NURF140,ISWI,SWI;1.000:6601:SMARCC2:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2::NM_139067:BAF170,Rsc8,CRACC2;1.000:8467:SMARCA5:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5::NM_003601:hSNF2H,hISWI,ISWI;1.000:9611:NCOR1:nuclear receptor co-repressor 1::NM_006311:N-CoR,hCIT529I10,TRAC1,hN-CoR,KIAA1047,MGC104216;1.000:9612:NCOR2:nuclear receptor co-repressor 2::NM_001077261:SMRT,SMRTE,TRAC-1,CTG26,TNRC14;1.000:55929:DMAP1:DNA methyltransferase 1 associated protein 1::NM_001034024:DNMAP1,FLJ11543,KIAA1425,DNMTAP1,EAF2,SWC4 | ||
|weight_matrix=NA:DMAP1_NCOR{1,2}_SMARC.p1;PO:A:C:G:T;01:12.270543:0:0:53.206047;02:6.555538:0:21.097696:37.823356;03:14.871297:0:7.520187:43.085106;04:0:57.610641:0:7.865949;05:31.864876:5.758988:23.861131:3.991595;06:0:1.493664:63.982926:0;07:0:0:0:65.47659;08:0:0:0:65.47659 | |weight_matrix=NA:DMAP1_NCOR{1,2}_SMARC.p1;PO:A:C:G:T;01:12.270543:0:0:53.206047;02:6.555538:0:21.097696:37.823356;03:14.871297:0:7.520187:43.085106;04:0:57.610641:0:7.865949;05:31.864876:5.758988:23.861131:3.991595;06:0:1.493664:63.982926:0;07:0:0:0:65.47659;08:0:0:0:65.47659 | ||
|motif_activities=0.990539482942,1.03059957318,1.08492384049,1.17228942779,0.987062702842,0.288429599708,0.33243907224,1.761275596,1.04649273726,0.718396883425,-0.206549452392,-0.43155689706,1.46005034668,0.989033482517,0.83133268051,1.07426395743,0.404105197744,2.55991589738,2.73321654176,2.44814881846,-0.126734063972,2.04854533094,1.69442794021,1.97943367333,2.29018078782,0.935341347423,0.570747276501,0.744056257357,0.67055320715,0.944086822475,0.816843066954,-1.61609088039,-1.11283547483,-0.39315948623,0.0873387953924,-0.232163588785,-0.034609599964,0.65332910855,0.945473365485,1.04057061614,0.741347702626,0.747617465305,0.682918846503,0.521614181203,0.624193097031,0.837204041413,-0.551674396602,-1.13347540572,-1.29258292872,-0.847803957397,-0.762387039419,-1.01845961894,2.70589617642,1.48909640931,1.58170054454,0.879893011291,0.571453694901,0.558622577176,-1.3862814337,-1.76028183929,-1.38990575281,-0.464184019163,-0.291447408342,1.03530186514,1.04039412416,0.97759242591,-0.520624030722,-0.602162302018,-1.00165855751,-1.04372440774,-1.08918525131,-1.60607709467,-1.62459843834,-1.00226238025,-0.901658672044,-1.04815495066,-1.44728991799,-1.31953537511,-1.15109395243,-1.57354296688,-1.40317752259,-1.39290122054,-1.87636069515,-1.4719516972,-1.28797092037,-1.29522874513,-1.37115065198,-1.43225862826,-0.402562945659,-0.468119529813,0.583864728239,-0.638006972259,0.0178133193633,0.0167302303837,-0.202879191381,-0.371964934321,0.219814574561,0.398757967451,0.331949784066,0.555031178552,0.843334870237,0.227989902325,0.400646357509,0.344052249567,-0.750504061094,-0.946547680061,-0.640212535668,0.618011784381,3.06639912131,0.928810856907,-0.231162412308,-0.496661764031,-0.0961945008546,-0.280018346747,-0.0176910927646,0.381429512348,-0.543468450547,0.39496220587,0.841360976431,0.41190495085,0.623027781836,0.893692562732,0.2928382786,-1.07105826596,-0.665254330026,1.33004945042,2.03968882624,1.53644028992,1.88320857672,-1.809625306,-1.5373659948,-0.987431768845,-1.90443985756,-1.62007925305,-1.65596458568,-1.37758793465,-0.114549939476,0.895528732459,-0.416835368199,-0.460932877634,-0.606893378911,-0.874822611244,-1.03184466552,-1.01039405087,-1.36018446718,-1.41212810196,-1.23667760041,-1.20811059576,-0.21481624735,0.314084583582,0.132146221972,-0.102667011349,0.294399511975,-0.217467706556,0.402216005672,-0.432923164834,1.30654285612,1.03185266735,1.4104938943,-1.13896808094,-1.11462057806,-1.06201546011,-0.922755840147,-0.628928098803,-0.763978114765,-0.823382540722,-0.891978842238,-0.521865309009,-0.718169728166,-0.525432077004,-0.413942457292,-0.293374043335,-0.180645239536,-0.0863813001615,-1.52446149982,-0.776916300507,2.45016428303,1.11736184981,-0.391236831103,-0.380579925742,-0.180759010845,0.247852950505,0.608735237602,0.967879282627,1.36714935217,1.87147745288,1.97037617025,1.81927714898,1.74084853199,1.25219279942,1.57539065517,1.75148582182,-0.470160931578,-0.215318326888,-0.721253190895,-0.40383770523,-0.218610698057,-0.234053102047,-0.12988531753,0.301641646584,0.243255485144,0.205358145528,-0.0926411386288,-0.480411786547,-0.51050086379,-0.691686109884,-0.464030245937,-0.231060387974,-0.0150970792948,-0.310514156362,0.0278043781885,-0.18482451867,0.100165242331,0.168066183876,-0.062743755932,0.0585635384463,0.0951964252354,0.341290683288,1.07597694188,-0.258897998956,-0.462261181364,-0.163835625696,-0.21822240337,-0.139951019058,-0.261683580432,-0.214148966394,-0.0838003487731,0.134001625316,0.224650741174,0.778751396388,0.958593027311,1.03390297846,2.68702862099,2.43069663472,0.422327488054,0.332390870512,-1.49684320273,-1.6831228158,0.382887570784,0.683170503154,-0.370399876647,-0.26287921442,-0.443626406135,-0.305828610754,-0.140795951761,-0.222585976806,-0.35806040096,-0.276151832267,-0.700317153631,-1.26494905331,0.265570386518,-0.363894083949,-0.46418937638,0.500273553066,0.161272885454,-0.58141068012,-0.758351919543,-0.437299988073,-1.1829217733,-0.79676552284,0.40669256824,0.0114501168817,0.04355587101,-0.22492494121,-0.178787638332,0.0564845473694,-0.193870612504,-0.409643444895,-0.456641562086,-0.132345890385,-0.159313265446,-0.121726700431,-0.206541661241,-0.652135238142,-0.88260735188,-1.22106593311,-0.0644099447345,0.417234823933,0.0991922274106,-0.271507729799,-0.12827732772,-0.342077426208,1.7428916467,-1.51381211566,1.22048502417,0.110741068535,0.632064583344,0.79686625495,1.1231321961,1.24697826102,2.02942479588,2.18487884068,2.18326571866,-0.407232076685,-0.199018156294,-0.543285793353,0.0524486337978,-0.163384510412,0.336723602871,-0.310353420229,-0.272560732772,-0.0487022031398,0.924446014693,1.49968179328,0.188309475704,-0.677151888868,-0.773150476802,-0.811612410404,-0.717270076153,-0.556121661369,-0.533125762475,-0.795780146875,-0.713698674613,0.718614918206,-0.00326036132024,1.93716256454,0.327482535471,0.837118182997,1.05942207237,1.340207216,1.46206422826,1.3371014614,1.51181197941,1.73624782285,1.71410917049,1.78821046078,1.97239376201,2.15526713502,2.40944920105,0.448388248683,-1.04386297761,-0.96230110746,-1.16381674979,0.158758398693,0.12413795728,0.291459913562,0.299454264024,0.00742086840201,-1.85903434984,-1.87038077036,-1.70855774668,-1.74130527788,-1.90742088908,-1.98995000141,-1.89341943096,-1.73411951214,-1.8033419525,-1.836061256,0.18430035591,-0.515339401212,-0.64700225312,-0.422995455647,-0.384727013846,-0.245430037488,-0.277456131845,-0.373187632506,-0.295524998789,-0.313497340314,-0.471877274114,-0.324347609906,0.0741885372688,-0.28480265743,-0.361187736716,-0.570293781339,-0.390157987993,-0.24321123929,-0.0147389621612,-0.401618522442,-0.193555304742,0.0308736431809,-0.114736532238,-0.141394751811,-0.0636962705062,-0.189127011434,-0.175209057462,-0.116405407971,-0.212691447231,-0.0322116143977,-0.333307869767,-0.240248723638,-0.394029097775,-0.323236691299,-0.120004676195,-0.913054470374,-0.166479910233,-0.206836378996,0.0698298434068,0.0930439203393,0.247747467672 | |||
}} | }} |
Revision as of 11:23, 16 February 2012
recognized by
- SMARCA1 ( EntrezGene:6594 )
- SMARCC2 ( EntrezGene:6601 )
- SMARCA5 ( EntrezGene:8467 )
- NCOR1 ( EntrezGene:9611 )
- NCOR2 ( EntrezGene:9612 )
- DMAP1 ( EntrezGene:55929 )
(data source: http://www.swissregulon.unibas.ch/)
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Motif Activities (MARA) on Phase1 data
hg19
Chart |
---|
Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Chart |
---|
Sample of clicked point: |