FFCP PHASE1:Hg19::chr3:38691158..38691203,-: Difference between revisions
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|description=CAGE_peak_1_at_SCN5A_5end | |description=CAGE_peak_1_at_SCN5A_5end | ||
|id=chr3:38691158..38691203,- | |id=chr3:38691158..38691203,- | ||
|ontology_enrichment_celltype=CL:0002139 | |ontology_enrichment_celltype=CL:0002139;5.45e-20;24!CL:0000115;5.32e-18;36!CL:0000071;2.30e-16;18!CL:0002078;2.95e-13;45!CL:0000213;6.10e-11;58!CL:0000215;6.10e-11;58!CL:1000449;2.24e-09;15!CL:1000413;4.78e-09;9!CL:1000497;1.14e-07;17!CL:0002518;1.14e-07;17!CL:0002321;2.23e-07;15!CL:0002681;2.24e-07;12!CL:0002584;2.24e-07;12 | ||
|ontology_enrichment_development=CL:0002546;2.30e-16;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON: | |ontology_enrichment_uberon=UBERON:0004638;2.30e-16;18!UBERON:0001986;2.30e-16;18!UBERON:0004852;2.30e-16;18!UBERON:0000487;8.82e-15;22!UBERON:0000490;3.05e-12;33!UBERON:0006914;6.01e-12;25!UBERON:0006555;2.24e-09;15!UBERON:0004819;2.24e-09;15!UBERON:0001285;2.24e-09;15!UBERON:0007684;2.24e-09;15!UBERON:0003915;4.78e-09;9!UBERON:0004700;4.78e-09;9!UBERON:0001917;4.78e-09;9!UBERON:0007625;1.51e-08;11!UBERON:0000353;5.67e-08;15!UBERON:0001134;7.57e-08;16!UBERON:0002036;7.57e-08;16!UBERON:0000970;8.64e-08;20!UBERON:0000019;1.80e-07;19!UBERON:0000047;1.80e-07;19!UBERON:0004088;1.80e-07;19!UBERON:0010230;1.80e-07;19!UBERON:0001225;2.24e-07;12!UBERON:0008987;2.24e-07;12!UBERON:0002104;3.72e-07;21!UBERON:0000020;5.58e-07;23 | ||
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| ||
|short_description=p1@SCN5A | |short_description=p1@SCN5A | ||
}} | }} |
Revision as of 03:32, 1 August 2012
Short description: | p1@SCN5A |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SCN5A_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000413689, ENST00000425664, ENST00000443581, ENST00000451551, ENST00000491944, NM_000335, NM_001099404, NM_001099405, NM_001160160, NM_001160161, NM_198056, uc003cil.3, uc003cin.2, uc003cio.2, uc010hhi.2, uc010hhk.2, uc011ayr.1_5end |
EntrezGene: | SCN5A |
HGNC: | 10593 |
UniProt: | E9PEK2E9PG18E9PEF3Q14524Q86V90E9PHB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.