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DOID:3904: Difference between revisions

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Revision as of 16:32, 26 June 2012

Name:bronchogenic carcinoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D002283
NCI:C35875
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:254622008
SNOMEDCT_2010_1_31:269561006
SNOMEDCT_2010_1_31:363493006

UMLS_CUI:C0007121
Synonyms: "BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008]
"bronchial cancer" EXACT [CSP2005:2017-5516]
"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875]
"bronchogenic carcinoma" EXACT [CSP2005:2017-6052]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1325(bronchus cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3904 (bronchogenic carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr2:97626375..97626385,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626375..97626385, -
1.78e-29FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_39df5efeecaef77fad20cc2f4b578036p20@RTN1
1.78e-29FFCP PHASE2:Hg19::chr13:76688920..76688924,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76688920..76688924, +
1.78e-29FFCP PHASE2:Hg19::chr10:29212181..29212188,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:29212181..29212188, +
1.78e-29FFCP PHASE1:Hg19::chrX:135761770..135761786,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:135761770..135761786, -
1.78e-29FFCP PHASE1:Hg19::chr7:120378721..120378730,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:120378721..120378730, -
1.78e-29FFCP PHASE2:Hg19::chr3:86701921..86701925,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:86701921..86701925, -
1.78e-29FFCP PHASE2:Hg19::chr17:59657604..59657621,-#_39df5efeecaef77fad20cc2f4b578036p@chr17:59657604..59657621, -
1.78e-29FFCP PHASE2:Hg19::chr11:73475071..73475076,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:73475071..73475076, -
1.78e-29FFCP PHASE1:Hg19::chr3:186548894..186548902,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:186548894..186548902, +
1.78e-29FFCP PHASE1:Hg19::chr2:51255348..51255351,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:51255348..51255351, +
1.78e-29FFCP PHASE2:Hg19::chr8:98104439..98104444,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98104439..98104444, -
1.78e-29FFCP PHASE2:Hg19::chr8:1616323..1616360,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:1616323..1616360, +
1.78e-29FFCP PHASE2:Hg19::chr5:33619084..33619089,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:33619084..33619089, -
1.78e-29FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:145094664..145094665, +
1.78e-29FFCP PHASE1:Hg19::chr8:57526601..57526612,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:57526601..57526612, +
1.78e-29FFCP PHASE1:Hg19::chr2:220607845..220607848,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:220607845..220607848, +
1.78e-29FFCP PHASE2:Hg19::chrX:154251771..154251775,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:154251771..154251775, -
1.78e-29FFCP PHASE1:Hg19::chr7:26590581..26590596,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26590581..26590596, -
1.78e-29FFCP PHASE1:Hg19::chr3:77129779..77129782,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:77129779..77129782, +
1.78e-29FFCP PHASE1:Hg19::chr18:28978481..28978484,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:28978481..28978484, -
1.78e-29FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:41519057..41519065, -
1.78e-29FFCP PHASE1:Hg19::chr13:92571252..92571265,-#_39df5efeecaef77fad20cc2f4b578036p@chr13:92571252..92571265, -
1.78e-29FFCP PHASE2:Hg19::chr6:125378772..125378777,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:125378772..125378777, +
1.78e-29FFCP PHASE1:Hg19::chr8:98014001..98014041,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98014001..98014041, -
1.78e-29FFCP PHASE2:Hg19::chr10:129710296..129710320,-#_39df5efeecaef77fad20cc2f4b578036p@chr10:129710296..129710320, -
1.78e-29FFCP PHASE1:Hg19::chr7:79765099..79765103,+#_39df5efeecaef77fad20cc2f4b578036p29@GNAI1
1.78e-29FFCP PHASE1:Hg19::chr4:41749788..41749795,-#_39df5efeecaef77fad20cc2f4b578036p10@PHOX2B
1.78e-29FFCP PHASE1:Hg19::chr3:95401649..95401655,-#_39df5efeecaef77fad20cc2f4b578036p3@ENST00000463799
1.78e-29FFCP PHASE1:Hg19::chr21:43917055..43917058,-#_39df5efeecaef77fad20cc2f4b578036p@chr21:43917055..43917058, -
1.78e-29FFCP PHASE2:Hg19::chr4:178653531..178653568,+#_39df5efeecaef77fad20cc2f4b578036p@chr4:178653531..178653568, +
1.78e-29FFCP PHASE2:Hg19::chr3:78360347..78360353,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:78360347..78360353, +
1.78e-29FFCP PHASE2:Hg19::chr18:33311016..33311032,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:33311016..33311032, -
1.78e-29FFCP PHASE2:Hg19::chr13:92569013..92569022,-#_39df5efeecaef77fad20cc2f4b578036p@chr13:92569013..92569022, -
1.78e-29FFCP PHASE2:Hg19::chr12:58158560..58158567,-#_39df5efeecaef77fad20cc2f4b578036p@chr12:58158560..58158567, -
1.78e-29FFCP PHASE1:Hg19::chr5:79097476..79097484,+#_39df5efeecaef77fad20cc2f4b578036p@chr5:79097476..79097484, +
1.78e-29FFCP PHASE1:Hg19::chr3:150914241..150914244,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:150914241..150914244, +
1.78e-29FFCP PHASE1:Hg19::chr10:65821760..65821780,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:65821760..65821780, +
1.78e-29FFCP PHASE1:Hg19::chr7:95776211..95776254,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:95776211..95776254, -
1.78e-29FFCP PHASE1:Hg19::chr19:46531131..46531136,+#_39df5efeecaef77fad20cc2f4b578036p@chr19:46531131..46531136, +
1.78e-29FFCP PHASE1:Hg19::chr17:79973593..79973633,-#_39df5efeecaef77fad20cc2f4b578036p@chr17:79973593..79973633, -
1.78e-29FFCP PHASE1:Hg19::chr14:58045800..58045814,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:58045800..58045814, -
1.78e-29FFCP PHASE2:Hg19::chr2:189756256..189756260,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:189756256..189756260, +
1.78e-29FFCP PHASE2:Hg19::chr18:74671119..74671124,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:74671119..74671124, +
1.78e-29FFCP PHASE2:Hg19::chr12:88178319..88178329,-#_39df5efeecaef77fad20cc2f4b578036p2@MKRN9P
1.78e-29FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_39df5efeecaef77fad20cc2f4b578036p13@DNMBP
1.78e-29FFCP PHASE1:Hg19::chr9:17454025..17454033,+#_39df5efeecaef77fad20cc2f4b578036p@chr9:17454025..17454033, +
1.78e-29FFCP PHASE1:Hg19::chr7:21209872..21209910,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:21209872..21209910, +
1.78e-29FFCP PHASE1:Hg19::chr6:44681761..44681769,-#_39df5efeecaef77fad20cc2f4b578036p@chr6:44681761..44681769, -
1.78e-29FFCP PHASE1:Hg19::chr17:39140424..39140431,-#_39df5efeecaef77fad20cc2f4b578036p4@KRT40
1.78e-29FFCP PHASE2:Hg19::chr3:194808375..194808396,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:194808375..194808396, +
1.78e-29FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_39df5efeecaef77fad20cc2f4b578036p12@CPXM1
1.78e-29FFCP PHASE2:Hg19::chr1:181360250..181360259,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:181360250..181360259, +
1.78e-29FFCP PHASE1:Hg19::chr10:129704382..129704389,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129704382..129704389, +
1.78e-29FFCP PHASE1:Hg19::chr1:100110851..100110860,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:100110851..100110860, +
1.78e-29FFCP PHASE1:Hg19::chr12:84664596..84664600,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:84664596..84664600, +
1.78e-29FFCP PHASE2:Hg19::chr18:10085504..10085505,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:10085504..10085505, +
1.78e-29FFCP PHASE2:Hg19::chr14:58448696..58448733,-#_39df5efeecaef77fad20cc2f4b578036p9@SLC35F4
1.78e-29FFCP PHASE2:Hg19::chr20:54101133..54101144,+#_39df5efeecaef77fad20cc2f4b578036p@chr20:54101133..54101144, +
1.78e-29FFCP PHASE2:Hg19::chr16:13010455..13010466,+#_39df5efeecaef77fad20cc2f4b578036p@chr16:13010455..13010466, +
1.78e-29FFCP PHASE1:Hg19::chr8:98108427..98108430,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98108427..98108430, -
1.78e-29FFCP PHASE1:Hg19::chr5:33650078..33650111,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:33650078..33650111, -
1.78e-29FFCP PHASE2:Hg19::chr8:97961686..97961696,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:97961686..97961696, -
1.78e-29FFCP PHASE2:Hg19::chr3:102635374..102635381,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:102635374..102635381, -
1.78e-29FFCP PHASE2:Hg19::chr2:23850222..23850227,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:23850222..23850227, +
1.78e-29FFCP PHASE2:Hg19::chr1:33705218..33705225,-#_39df5efeecaef77fad20cc2f4b578036p@chr1:33705218..33705225, -
1.78e-29FFCP PHASE2:Hg19::chr11:98528704..98528712,+#_39df5efeecaef77fad20cc2f4b578036p@chr11:98528704..98528712, +
1.78e-29FFCP PHASE1:Hg19::chr2:194837773..194837784,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:194837773..194837784, -
1.78e-29FFCP PHASE2:Hg19::chr7:79840117..79840122,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:79840117..79840122, +
1.78e-29FFCP PHASE1:Hg19::chr14:57127818..57127825,+#_39df5efeecaef77fad20cc2f4b578036p@chr14:57127818..57127825, +

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