UBERON:0001172: Difference between revisions
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|def= | |def= | ||
|xref=FMA:14654;;MA:0002496;;ncithesaurus:Liver_Acinus;;SCTID:272214009 | |xref=FMA:14654;;MA:0002496;;ncithesaurus:Liver_Acinus;;SCTID:272214009 | ||
|is_a=UBERON: | |is_a=UBERON:0004119;;UBERON:0009842 | ||
|synonym="liver acinus" EXACT [];;"portal acinus" EXACT [] | |synonym="liver acinus" EXACT [];;"portal acinus" EXACT [] | ||
|comment=This class was created automatically from a combination of ontologies | |comment=This class was created automatically from a combination of ontologies | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 16:58, 26 June 2012
| Name: | hepatic acinus | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"liver acinus" EXACT [] "portal acinus" EXACT [] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_14654-MA_0002496 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004119(endoderm-derived structure),UBERON:0009842(acinus) |
|---|
Children
| part of: | UBERON:0001282 (intralobular bile duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001172 (hepatic acinus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:1101041..1101044,+#_d29232ed534d2991c8b7e899568f906f | p@chr18:1101041..1101044, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr13:88008760..88008795,+#_d29232ed534d2991c8b7e899568f906f | p@chr13:88008760..88008795, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545407..234545408,+#_d29232ed534d2991c8b7e899568f906f | p9@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545407..234545408,+#_d29232ed534d2991c8b7e899568f906f | p9@UGT1A10 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545437..234545446,+#_d29232ed534d2991c8b7e899568f906f | p4@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545437..234545446,+#_d29232ed534d2991c8b7e899568f906f | p4@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:45826350..45826387,+#_d29232ed534d2991c8b7e899568f906f | p22@TRPM2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr21:45826350..45826387,+#_d29232ed534d2991c8b7e899568f906f | p22@TRPM2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:77795673..77795689,-#_d29232ed534d2991c8b7e899568f906f | p@chr11:77795673..77795689, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545708..234545716,+#_d29232ed534d2991c8b7e899568f906f | p5@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545708..234545716,+#_d29232ed534d2991c8b7e899568f906f | p5@UGT1A10 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:207059144..207059147,+#_d29232ed534d2991c8b7e899568f906f | p@chr1:207059144..207059147, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:1101041..1101044,+#_d29232ed534d2991c8b7e899568f906f | p@chr18:1101041..1101044, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:77795673..77795689,-#_d29232ed534d2991c8b7e899568f906f | p@chr11:77795673..77795689, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:207059144..207059147,+#_d29232ed534d2991c8b7e899568f906f | p@chr1:207059144..207059147, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:166513744..166513789,+#_d29232ed534d2991c8b7e899568f906f | p@chr4:166513744..166513789, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr13:88008760..88008795,+#_d29232ed534d2991c8b7e899568f906f | p@chr13:88008760..88008795, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:166513744..166513789,+#_d29232ed534d2991c8b7e899568f906f | p@chr4:166513744..166513789, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:52786654..52786665,-#_be1e9cbba04f1dc945b8e83d388c299d | p@chr5:52786654..52786665, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:52786654..52786665,-#_be1e9cbba04f1dc945b8e83d388c299d | p@chr5:52786654..52786665, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:98605781..98605792,+#_be1e9cbba04f1dc945b8e83d388c299d | p34@IPO5 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32522832..32522842,-#_be1e9cbba04f1dc945b8e83d388c299d | p@chr6:32522832..32522842, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32522832..32522842,-#_be1e9cbba04f1dc945b8e83d388c299d | p@chr6:32522832..32522842, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:158155402..158155409,-#_be1e9cbba04f1dc945b8e83d388c299d | p3@ENST00000410472 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:158155402..158155409,-#_be1e9cbba04f1dc945b8e83d388c299d | p3@ENST00000410472 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr11:73874637..73874639,+#_be1e9cbba04f1dc945b8e83d388c299d | p@chr11:73874637..73874639, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr11:73874637..73874639,+#_be1e9cbba04f1dc945b8e83d388c299d | p@chr11:73874637..73874639, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:98605781..98605792,+#_be1e9cbba04f1dc945b8e83d388c299d | p34@IPO5 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:7904519..7904534,-#_a2bade7e90a20fbd5d95789e70742040 | p1@ENST00000529488, p1@ENST00000533634 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:158005569..158005571,-#_a2bade7e90a20fbd5d95789e70742040 | p@chr2:158005569..158005571, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:158005569..158005571,-#_a2bade7e90a20fbd5d95789e70742040 | p@chr2:158005569..158005571, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:7904519..7904534,-#_a2bade7e90a20fbd5d95789e70742040 | p1@ENST00000529488, p1@ENST00000533634 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:26936427..26936432,-#_a2bade7e90a20fbd5d95789e70742040 | p@chr9:26936427..26936432, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:26936427..26936432,-#_a2bade7e90a20fbd5d95789e70742040 | p@chr9:26936427..26936432, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_a2bade7e90a20fbd5d95789e70742040 | p3@FMR1NB |
| 2.55e-98 | FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_a2bade7e90a20fbd5d95789e70742040 | p3@FMR1NB |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:234545393..234545403,+#_50715f22936b44034cf68750984f4a89 | p3@UGT1A10 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:234545393..234545403,+#_50715f22936b44034cf68750984f4a89 | p3@UGT1A10 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr15:32969649..32969656,+#_50715f22936b44034cf68750984f4a89 | p14@SCG5 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:33469231..33469240,+#_50715f22936b44034cf68750984f4a89 | p@chr4:33469231..33469240, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:33469231..33469240,+#_50715f22936b44034cf68750984f4a89 | p@chr4:33469231..33469240, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr15:32969649..32969656,+#_50715f22936b44034cf68750984f4a89 | p14@SCG5 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr6:117747000..117747010,-#_50715f22936b44034cf68750984f4a89 | p9@ROS1 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr6:117747000..117747010,-#_50715f22936b44034cf68750984f4a89 | p9@ROS1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:33469257..33469268,+#_397d8911600efc4dbbd775f5956ab56d | p@chr4:33469257..33469268, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:33469257..33469268,+#_397d8911600efc4dbbd775f5956ab56d | p@chr4:33469257..33469268, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr22:49769903..49769910,+#_7c6a7a7c140c9157c4fa2daed3334933 | p@chr22:49769903..49769910, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr22:49769903..49769910,+#_7c6a7a7c140c9157c4fa2daed3334933 | p@chr22:49769903..49769910, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:106556772..106556810,-#_2e63e1df8cb828abcae364265060cdc2 | p@chr3:106556772..106556810, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:32522809..32522827,-#_2e63e1df8cb828abcae364265060cdc2 | p@chr6:32522809..32522827, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr18:514455..514467,+#_2e63e1df8cb828abcae364265060cdc2 | p@chr18:514455..514467, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:106556772..106556810,-#_2e63e1df8cb828abcae364265060cdc2 | p@chr3:106556772..106556810, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:32522809..32522827,-#_2e63e1df8cb828abcae364265060cdc2 | p@chr6:32522809..32522827, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:72255927..72255937,+#_2e63e1df8cb828abcae364265060cdc2 | p@chr6:72255927..72255937, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr18:514455..514467,+#_2e63e1df8cb828abcae364265060cdc2 | p@chr18:514455..514467, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:72255927..72255937,+#_2e63e1df8cb828abcae364265060cdc2 | p@chr6:72255927..72255937, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:187867941..187867952,+#_c8432694ffc1d3f13014ee3d1ec730cd | p1@ENST00000453517 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:187867941..187867952,+#_c8432694ffc1d3f13014ee3d1ec730cd | p1@ENST00000453517 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr11:77794459..77794475,+#_c8432694ffc1d3f13014ee3d1ec730cd | p@chr11:77794459..77794475, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr11:77794459..77794475,+#_c8432694ffc1d3f13014ee3d1ec730cd | p@chr11:77794459..77794475, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr4:5526611..5526614,-#_c8432694ffc1d3f13014ee3d1ec730cd | p@chr4:5526611..5526614, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr4:5526611..5526614,-#_c8432694ffc1d3f13014ee3d1ec730cd | p@chr4:5526611..5526614, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:77792240..77792241,+#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p@chr11:77792240..77792241, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:77792240..77792241,+#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p@chr11:77792240..77792241, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr20:50479417..50479427,-#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p2@ENST00000438154 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr20:50479417..50479427,-#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p2@ENST00000438154 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:29774431..29774441,-#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p@chr21:29774431..29774441, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:29774431..29774441,-#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p@chr21:29774431..29774441, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr22:49769966..49769971,+#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p@chr22:49769966..49769971, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr22:49769966..49769971,+#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p@chr22:49769966..49769971, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:10597500..10597509,-#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p2@uc011abv.1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:10597500..10597509,-#_dc1b27c816cb96f2b4069f9c3d62d1b9 | p2@uc011abv.1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr5:5146235..5146246,+#_81459d0dbe4e0aa2f052823476c90983 | p7@ADAMTS16 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr5:5146235..5146246,+#_81459d0dbe4e0aa2f052823476c90983 | p7@ADAMTS16 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr12:19928351..19928358,+#_81459d0dbe4e0aa2f052823476c90983 | p2@ENST00000535764 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:19928351..19928358,+#_81459d0dbe4e0aa2f052823476c90983 | p2@ENST00000535764 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr21:28899015..28899027,+#_81459d0dbe4e0aa2f052823476c90983 | p@chr21:28899015..28899027, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr21:28899015..28899027,+#_81459d0dbe4e0aa2f052823476c90983 | p@chr21:28899015..28899027, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chrX:70798285..70798290,+#_81459d0dbe4e0aa2f052823476c90983 | p1@ACRC |
| 6.58e-50 | FFCP PHASE1:Hg19::chrX:70798285..70798290,+#_81459d0dbe4e0aa2f052823476c90983 | p1@ACRC |
| 6.62e-41 | FFCP PHASE1:Hg19::chr4:166513830..166513834,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr4:166513830..166513834, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr4:166513830..166513834,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr4:166513830..166513834, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:514484..514495,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr18:514484..514495, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chrX:147062877..147062885,+#_911e6bd500f2ce48b174a728f0dc55ce | p2@FMR1NB |
| 6.62e-41 | FFCP PHASE1:Hg19::chrX:147062877..147062885,+#_911e6bd500f2ce48b174a728f0dc55ce | p2@FMR1NB |
| 6.62e-41 | FFCP PHASE2:Hg19::chr6:75912602..75912613,-#_911e6bd500f2ce48b174a728f0dc55ce | p25@COL12A1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:98275000..98275016,-#_911e6bd500f2ce48b174a728f0dc55ce | p@chr3:98275000..98275016, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr6:75912602..75912613,-#_911e6bd500f2ce48b174a728f0dc55ce | p25@COL12A1 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:98275000..98275016,-#_911e6bd500f2ce48b174a728f0dc55ce | p@chr3:98275000..98275016, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:514484..514495,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr18:514484..514495, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:158155450..158155474,-#_911e6bd500f2ce48b174a728f0dc55ce | p1@ENST00000410472 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:158155450..158155474,-#_911e6bd500f2ce48b174a728f0dc55ce | p1@ENST00000410472 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:1099004..1099011,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr18:1099004..1099011, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:1099004..1099011,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr18:1099004..1099011, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:38402050..38402059,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr2:38402050..38402059, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:38402050..38402059,+#_911e6bd500f2ce48b174a728f0dc55ce | p@chr2:38402050..38402059, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr1:75600333..75600348,+#_978417a8d3f832df8541ea95023546f8 | p5@LHX8 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr1:75600333..75600348,+#_978417a8d3f832df8541ea95023546f8 | p5@LHX8 |
| 9.91e-41 | FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_978417a8d3f832df8541ea95023546f8 | p@chr12:127737083..127737103, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_978417a8d3f832df8541ea95023546f8 | p@chr12:127737083..127737103, - |
