UBERON:0004647: Difference between revisions
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|def= | |def= | ||
|xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004 | |xref=FMA:14471;;MA:0002494;;ncithesaurus:Hepatic_Lobule;;SCTID:362194004 | ||
|is_a=UBERON:0000064;;UBERON: | |is_a=UBERON:0000064;;UBERON:0004119 | ||
|synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471] | |synonym="hepatic lobule" EXACT [FMA:14471];;"lobulus hepaticus" EXACT [FMA:14471] | ||
|comment= | |comment= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:05, 26 June 2012
| Name: | liver lobule | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"hepatic lobule" EXACT [FMA:14471] "lobulus hepaticus" EXACT [FMA:14471] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure) |
|---|
Children
| part of: | UBERON:0001172 (hepatic acinus),UBERON:0001281 (hepatic sinusoid),UBERON:0001282 (intralobular bile duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
... further results Mouse (Mus musculus)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004647 (liver lobule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.74e-88 | FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463 | p2@ENST00000448698 |
| 9.74e-88 | FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_21bc846de0d4754dec7b345e1a836463 | p2@ENST00000448698 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:132405466..132405470, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr14:101778294..101778296, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:76329688..76329692, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:114250006..114250039, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:97402708..97402712, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:163794592..163794593, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:65159026..65159034, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:133323630..133323631, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:186559285..186559288, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:43407825..43407830, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:93895817..93895819, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:34798597..34798606, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:25364645..25364655, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:111108947..111108951, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:186559285..186559288, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:85585949..85585969, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:62199266..62199267, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr13:5840965..5840966, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr5:33088768..33088773, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_d467f18b3a526e740a80ed85ff1ec551 | p6@Adamts1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:92938260..92938264, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr1:173044327..173044331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr14:8928284..8928331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:118287827..118287833, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:35881716..35881727, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr8:25530071..25530072, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:84756280..84756286, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:84756280..84756286, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:88669906..88669914, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr12:86691503..86691504, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:24807620..24807650, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:133323630..133323631, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr18:39297570..39297573, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_d467f18b3a526e740a80ed85ff1ec551 | p8@Il3ra |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_d467f18b3a526e740a80ed85ff1ec551 | p@chr2:11935531..11935538, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_d467f18b3a526e740a80ed85ff1ec551 | p@chr17:35093377..35093381, + |
