UBERON:0005056: Difference between revisions
From FANTOM5_SSTAR
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|obo_creation_date= | |obo_creation_date= | ||
|subset=organ_slim | |subset=organ_slim | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:05, 26 June 2012
| Name: | external female genitalia | ||
|---|---|---|---|
| Definition: | "An external reproductive organ that is part of a female reproductive system [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"external female genital organ" EXACT [BTO:0003100] "external genitalia of female reproductive system" EXACT [OBOL:automatic] "female external genitalia" EXACT [FMA:45649] "organa genitalia feminina externa" RELATED [BTO:0003100] | ||
| Subset: | organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003134(female reproductive organ),UBERON:0004176(external genitalia) |
|---|---|
| disjoint_from: | UBERON:0009196(indifferent external genitalia) |
Children
| part of: | UBERON:0000997 (mammalian vulva) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10426-106D3 (epidermoid carcinoma cell line:A431)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005056 (external female genitalia), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:84943573..84943591,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr5:84943573..84943591, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:55088621..55088630,+#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr7:55088621..55088630, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:69988499..69988503,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr11:69988499..69988503, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr19:51512580..51512608,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr19:51512580..51512608, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:39678082..39678085,-#_f81e6cbe66be9e8915ceef504ea464e0 | p15@KRT15 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:43706592..43706595,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr6:43706592..43706595, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:135687993..135687996,+#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr9:135687993..135687996, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:72258505..72258535,+#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr2:72258505..72258535, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:84943573..84943591,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr5:84943573..84943591, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:55088621..55088630,+#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr7:55088621..55088630, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:23975557..23975561,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr4:23975557..23975561, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr19:51512580..51512608,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr19:51512580..51512608, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:39678082..39678085,-#_f81e6cbe66be9e8915ceef504ea464e0 | p15@KRT15 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:23975557..23975561,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr4:23975557..23975561, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:135687993..135687996,+#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr9:135687993..135687996, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:43706592..43706595,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr6:43706592..43706595, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:72258505..72258535,+#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr2:72258505..72258535, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:69988499..69988503,-#_f81e6cbe66be9e8915ceef504ea464e0 | p@chr11:69988499..69988503, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24125531..24125534,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24125531..24125534, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:209980124..209980125,+#_d51b1e7f3653db10439a09820b2c5487 | p@chr1:209980124..209980125, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24105215..24105219,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24105215..24105219, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:222131869..222131874,+#_d51b1e7f3653db10439a09820b2c5487 | p@chr1:222131869..222131874, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24133915..24133919,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24133915..24133919, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24233822..24233825,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24233822..24233825, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24125531..24125534,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24125531..24125534, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24188430..24188435,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24188430..24188435, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:222131869..222131874,+#_d51b1e7f3653db10439a09820b2c5487 | p@chr1:222131869..222131874, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24133915..24133919,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24133915..24133919, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24233822..24233825,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24233822..24233825, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:209980124..209980125,+#_d51b1e7f3653db10439a09820b2c5487 | p@chr1:209980124..209980125, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:24105215..24105219,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24105215..24105219, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:24188430..24188435,-#_d51b1e7f3653db10439a09820b2c5487 | p@chr4:24188430..24188435, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:55141834..55141838,-#_a732ba243517803d413724a7bde13490 | p@chr7:55141834..55141838, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:55141834..55141838,-#_a732ba243517803d413724a7bde13490 | p@chr7:55141834..55141838, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:23981805..23981809,-#_39480de0eb189fd01f108e6ff808bdb8 | p@chr4:23981805..23981809, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_39480de0eb189fd01f108e6ff808bdb8 | p1@ENST00000457815 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:24100907..24100911,-#_39480de0eb189fd01f108e6ff808bdb8 | p@chr4:24100907..24100911, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_39480de0eb189fd01f108e6ff808bdb8 | p1@ENST00000457815 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:23981805..23981809,-#_39480de0eb189fd01f108e6ff808bdb8 | p@chr4:23981805..23981809, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:24100907..24100911,-#_39480de0eb189fd01f108e6ff808bdb8 | p@chr4:24100907..24100911, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:159149368..159149371,-#_daeec47c689a1bb4e1205e674ca28f79 | p@chr6:159149368..159149371, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:39675882..39675894,-#_daeec47c689a1bb4e1205e674ca28f79 | p@chr17:39675882..39675894, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:23330592..23330593,-#_daeec47c689a1bb4e1205e674ca28f79 | p@chr1:23330592..23330593, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:39675882..39675894,-#_daeec47c689a1bb4e1205e674ca28f79 | p@chr17:39675882..39675894, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:159149368..159149371,-#_daeec47c689a1bb4e1205e674ca28f79 | p@chr6:159149368..159149371, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:23330592..23330593,-#_daeec47c689a1bb4e1205e674ca28f79 | p@chr1:23330592..23330593, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_93e5f0171d9757f0998ad52545161a3c | p8@SERPINB13 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_93e5f0171d9757f0998ad52545161a3c | p8@SERPINB13 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr20:46473115..46473124,-#_df8a06613f21273f3e246c2fd7f39d6e | p@chr20:46473115..46473124, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:154497207..154497243,-#_df8a06613f21273f3e246c2fd7f39d6e | p@chr7:154497207..154497243, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:27192983..27192986,+#_df8a06613f21273f3e246c2fd7f39d6e | p@chr1:27192983..27192986, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr16:3041330..3041336,+#_df8a06613f21273f3e246c2fd7f39d6e | p@chr16:3041330..3041336, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:98870934..98870947,+#_df8a06613f21273f3e246c2fd7f39d6e | p4@MYH16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:98870948..98870967,+#_df8a06613f21273f3e246c2fd7f39d6e | p3@MYH16 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr20:46473115..46473124,-#_df8a06613f21273f3e246c2fd7f39d6e | p@chr20:46473115..46473124, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:98870934..98870947,+#_df8a06613f21273f3e246c2fd7f39d6e | p4@MYH16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:209945709..209945715,-#_df8a06613f21273f3e246c2fd7f39d6e | p@chr1:209945709..209945715, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:154497207..154497243,-#_df8a06613f21273f3e246c2fd7f39d6e | p@chr7:154497207..154497243, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:98870948..98870967,+#_df8a06613f21273f3e246c2fd7f39d6e | p3@MYH16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:27192983..27192986,+#_df8a06613f21273f3e246c2fd7f39d6e | p@chr1:27192983..27192986, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:209945709..209945715,-#_df8a06613f21273f3e246c2fd7f39d6e | p@chr1:209945709..209945715, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr16:3041330..3041336,+#_df8a06613f21273f3e246c2fd7f39d6e | p@chr16:3041330..3041336, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:61586483..61586487,+#_2b872c57f81ef31833c07a32482ee80e | p@chr18:61586483..61586487, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr6:47009992..47009993,-#_2b872c57f81ef31833c07a32482ee80e | p4@GPR110 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr15:92484587..92484596,+#_2b872c57f81ef31833c07a32482ee80e | p14@SLCO3A1 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:61586483..61586487,+#_2b872c57f81ef31833c07a32482ee80e | p@chr18:61586483..61586487, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr15:92484587..92484596,+#_2b872c57f81ef31833c07a32482ee80e | p14@SLCO3A1 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr6:47009992..47009993,-#_2b872c57f81ef31833c07a32482ee80e | p4@GPR110 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr7:55270422..55270434,+#_3d031bcef78a552a4c60387f67825b0c | p@chr7:55270422..55270434, + |
| 9.91e-41 | FFCP PHASE2:Hg19::chr7:55149426..55149432,+#_3d031bcef78a552a4c60387f67825b0c | p@chr7:55149426..55149432, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr7:55270422..55270434,+#_3d031bcef78a552a4c60387f67825b0c | p@chr7:55270422..55270434, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr7:55149426..55149432,+#_3d031bcef78a552a4c60387f67825b0c | p@chr7:55149426..55149432, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr7:4722965..4723005,-#_e373c24553d28f90d39f715a3ff321f1 | p@chr7:4722965..4723005, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr17:39675950..39675974,-#_e373c24553d28f90d39f715a3ff321f1 | p@chr17:39675950..39675974, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr8:143866652..143866665,-#_e373c24553d28f90d39f715a3ff321f1 | p@chr8:143866652..143866665, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr17:39675950..39675974,-#_e373c24553d28f90d39f715a3ff321f1 | p@chr17:39675950..39675974, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr7:4722965..4723005,-#_e373c24553d28f90d39f715a3ff321f1 | p@chr7:4722965..4723005, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr8:143866652..143866665,-#_e373c24553d28f90d39f715a3ff321f1 | p@chr8:143866652..143866665, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr3:50308296..50308307,+#_d05b88860c737c0e27b7a165c30fd276 | p9@SEMA3B |
| 2.21e-40 | FFCP PHASE1:Hg19::chr15:101417937..101417955,+#_d05b88860c737c0e27b7a165c30fd276 | p8@ALDH1A3 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr15:101417937..101417955,+#_d05b88860c737c0e27b7a165c30fd276 | p8@ALDH1A3 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr3:50308296..50308307,+#_d05b88860c737c0e27b7a165c30fd276 | p9@SEMA3B |
| 3.3e-40 | FFCP PHASE1:Hg19::chr17:2264983..2264992,+#_8796adab76a856c4b9ea97436a13c5ef | p@chr17:2264983..2264992, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr2:165650899..165650926,-#_8796adab76a856c4b9ea97436a13c5ef | p@chr2:165650899..165650926, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr17:2264983..2264992,+#_8796adab76a856c4b9ea97436a13c5ef | p@chr17:2264983..2264992, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr2:165650899..165650926,-#_8796adab76a856c4b9ea97436a13c5ef | p@chr2:165650899..165650926, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:24208460..24208464,-#_f9794cd09802409fb779d0e69c79108b | p@chr4:24208460..24208464, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:143814432..143814436,-#_f9794cd09802409fb779d0e69c79108b | p@chr8:143814432..143814436, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:24232569..24232574,-#_f9794cd09802409fb779d0e69c79108b | p@chr4:24232569..24232574, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:24208460..24208464,-#_f9794cd09802409fb779d0e69c79108b | p@chr4:24208460..24208464, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:143814432..143814436,-#_f9794cd09802409fb779d0e69c79108b | p@chr8:143814432..143814436, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr7:55053540..55053550,+#_f9794cd09802409fb779d0e69c79108b | p@chr7:55053540..55053550, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:24232569..24232574,-#_f9794cd09802409fb779d0e69c79108b | p@chr4:24232569..24232574, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr7:55053540..55053550,+#_f9794cd09802409fb779d0e69c79108b | p@chr7:55053540..55053550, + |
| 2.58e-34 | FFCP PHASE2:Hg19::chr2:173374596..173374600,+#_bf3e01f073a912ab9d8697fa8a2e7b2e | p@chr2:173374596..173374600, + |
| 2.58e-34 | FFCP PHASE1:Hg19::chr7:98822527..98822533,+#_bf3e01f073a912ab9d8697fa8a2e7b2e | p@chr7:98822527..98822533, + |
| 2.58e-34 | FFCP PHASE1:Hg19::chr2:173374596..173374600,+#_bf3e01f073a912ab9d8697fa8a2e7b2e | p@chr2:173374596..173374600, + |
| 2.58e-34 | FFCP PHASE2:Hg19::chr7:98822527..98822533,+#_bf3e01f073a912ab9d8697fa8a2e7b2e | p@chr7:98822527..98822533, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr1:183178134..183178138,+#_1afd1134413b18b96c7aa71c60bd1584 | p@chr1:183178134..183178138, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr1:183178134..183178138,+#_1afd1134413b18b96c7aa71c60bd1584 | p@chr1:183178134..183178138, + |
