UBERON:0008947: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:08, 26 June 2012
| Name: | respiratory primordium | ||
|---|---|---|---|
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001048(primordium) |
|---|
Children
| develops from: | UBERON:0000065 (respiratory tract),UBERON:0000118 (lung bud),UBERON:0001737 (larynx),UBERON:0003126 (trachea) |
|---|---|
| part of: | UBERON:0005597 (lung primordium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008947 (respiratory primordium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.21e-66 | FFCP PHASE2:Mm9::chr11:85703335..85703350,+#_456fc65cd417a979100fc3b737104462 | p4@Tbx4 |
| 1.21e-66 | FFCP PHASE1:Mm9::chr11:85703335..85703350,+#_456fc65cd417a979100fc3b737104462 | p4@Tbx4 |
| 4.71e-66 | FFCP PHASE2:Mm9::chr9:20829911..20829920,+#_7184300ff6a39a760c5db6ce5544c384 | p@chr9:20829911..20829920, + |
| 4.71e-66 | FFCP PHASE1:Mm9::chr9:20829911..20829920,+#_7184300ff6a39a760c5db6ce5544c384 | p@chr9:20829911..20829920, + |
| 1.06e-62 | FFCP PHASE1:Mm9::chr11:85589157..85589190,-#_e8a53c2e7d477f0007ae5607952a3ac1 | p1@ENSMUST00000134305 |
| 1.06e-62 | FFCP PHASE2:Mm9::chr11:85589157..85589190,-#_e8a53c2e7d477f0007ae5607952a3ac1 | p1@ENSMUST00000134305 |
| 1.52e-61 | FFCP PHASE2:Mm9::chr11:85533239..85533252,-#_de06c2d607f00d8e0532769b20915ef6 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
| 1.52e-61 | FFCP PHASE1:Mm9::chr11:85533239..85533252,-#_de06c2d607f00d8e0532769b20915ef6 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
| 1.91e-61 | FFCP PHASE1:Mm9::chr11:85699562..85699575,+#_4eed34035cd52f594ec809d5df657037 | p6@Tbx4 |
| 1.91e-61 | FFCP PHASE2:Mm9::chr11:85699562..85699575,+#_4eed34035cd52f594ec809d5df657037 | p6@Tbx4 |
| 5.56e-61 | FFCP PHASE2:Mm9::chr11:59457994..59457997,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr11:59457994..59457997, - |
| 5.56e-61 | FFCP PHASE2:Mm9::chr12:57598716..57598720,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr12:57598716..57598720, - |
| 5.56e-61 | FFCP PHASE1:Mm9::chr8:94878479..94878503,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr8:94878479..94878503, - |
| 5.56e-61 | FFCP PHASE1:Mm9::chr4:138812977..138812992,+#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr4:138812977..138812992, + |
| 5.56e-61 | FFCP PHASE2:Mm9::chr4:138812977..138812992,+#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr4:138812977..138812992, + |
| 5.56e-61 | FFCP PHASE1:Mm9::chr11:59457994..59457997,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr11:59457994..59457997, - |
| 5.56e-61 | FFCP PHASE2:Mm9::chr12:57636003..57636017,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr12:57636003..57636017, - |
| 5.56e-61 | FFCP PHASE1:Mm9::chr12:57636003..57636017,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr12:57636003..57636017, - |
| 5.56e-61 | FFCP PHASE2:Mm9::chr8:94878479..94878503,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr8:94878479..94878503, - |
| 5.56e-61 | FFCP PHASE1:Mm9::chr12:57598716..57598720,-#_88b85e8df6f9abdac1ae77d99f9cb12e | p@chr12:57598716..57598720, - |
| 1.35e-60 | FFCP PHASE2:Mm9::chr7:56809246..56809272,+#_763f384134d892a858414f5c7f2b87cb | p9@Nav2 |
| 1.35e-60 | FFCP PHASE1:Mm9::chr7:56809246..56809272,+#_763f384134d892a858414f5c7f2b87cb | p9@Nav2 |
| 2.87e-58 | FFCP PHASE1:Mm9::chr12:57633887..57633899,-#_e0b00b25d0af6ed6e5a94399f47a7ec2 | p@chr12:57633887..57633899, - |
| 2.87e-58 | FFCP PHASE2:Mm9::chr12:57633887..57633899,-#_e0b00b25d0af6ed6e5a94399f47a7ec2 | p@chr12:57633887..57633899, - |
| 1.23e-57 | FFCP PHASE2:Mm9::chr12:57637649..57637665,-#_89ba902691cfb243e29f39368d0b8ccf | p8@Nkx2-1 |
| 1.23e-57 | FFCP PHASE1:Mm9::chr12:57637649..57637665,-#_89ba902691cfb243e29f39368d0b8ccf | p8@Nkx2-1 |
| 1.37e-57 | FFCP PHASE1:Mm9::chr12:57630487..57630498,-#_f5d97e7d33563d1863be7144ee4229d9 | p2@E030019B13Rik |
| 1.37e-57 | FFCP PHASE2:Mm9::chr12:57630487..57630498,-#_f5d97e7d33563d1863be7144ee4229d9 | p2@E030019B13Rik |
| 1.53e-57 | FFCP PHASE2:Mm9::chr2:17653019..17653038,-#_e9ee51dc74b0f7ccfe51f6f367d94f00 | p10@Nebl |
| 1.53e-57 | FFCP PHASE1:Mm9::chr2:17653019..17653038,-#_e9ee51dc74b0f7ccfe51f6f367d94f00 | p10@Nebl |
| 1.7e-57 | FFCP PHASE2:Mm9::chr12:57637700..57637717,-#_6de78c72efe0c9ca5e6fd4d394e90928 | p9@Nkx2-1 |
| 1.7e-57 | FFCP PHASE1:Mm9::chr12:57637700..57637717,-#_6de78c72efe0c9ca5e6fd4d394e90928 | p9@Nkx2-1 |
| 1.79e-56 | FFCP PHASE2:Mm9::chr12:57630364..57630373,-#_6af4ae109d4e279971a33e7ea26991d3 | p3@E030019B13Rik |
| 1.79e-56 | FFCP PHASE1:Mm9::chr12:57598537..57598547,-#_6af4ae109d4e279971a33e7ea26991d3 | p@chr12:57598537..57598547, - |
| 1.79e-56 | FFCP PHASE1:Mm9::chr19:18833097..18833135,+#_6af4ae109d4e279971a33e7ea26991d3 | p3@Trpm6 |
| 1.79e-56 | FFCP PHASE2:Mm9::chr12:57598537..57598547,-#_6af4ae109d4e279971a33e7ea26991d3 | p@chr12:57598537..57598547, - |
| 1.79e-56 | FFCP PHASE2:Mm9::chr19:18833097..18833135,+#_6af4ae109d4e279971a33e7ea26991d3 | p3@Trpm6 |
| 1.79e-56 | FFCP PHASE1:Mm9::chr12:57630364..57630373,-#_6af4ae109d4e279971a33e7ea26991d3 | p3@E030019B13Rik |
| 2.01e-56 | FFCP PHASE2:Mm9::chr14:115241755..115241762,-#_ce3f00141ea126555dc4c510dafe8538 | p@chr14:115241755..115241762, - |
| 2.01e-56 | FFCP PHASE2:Mm9::chr12:57636278..57636289,+#_ce3f00141ea126555dc4c510dafe8538 | p@chr12:57636278..57636289, + |
| 2.01e-56 | FFCP PHASE1:Mm9::chr12:57636278..57636289,+#_ce3f00141ea126555dc4c510dafe8538 | p@chr12:57636278..57636289, + |
| 2.01e-56 | FFCP PHASE1:Mm9::chr14:115241755..115241762,-#_ce3f00141ea126555dc4c510dafe8538 | p@chr14:115241755..115241762, - |
| 2.24e-56 | FFCP PHASE1:Mm9::chr4:138812999..138813015,+#_225d224e71eef00a813ae67287b25a2a | p@chr4:138812999..138813015, + |
| 2.24e-56 | FFCP PHASE2:Mm9::chr4:138812999..138813015,+#_225d224e71eef00a813ae67287b25a2a | p@chr4:138812999..138813015, + |
| 3.93e-56 | FFCP PHASE1:Mm9::chr1:40522810..40522820,+#_4edb6abf351ee54bc7729b2e692e2b55 | p7@Il18r1 |
| 3.93e-56 | FFCP PHASE2:Mm9::chr1:40522810..40522820,+#_4edb6abf351ee54bc7729b2e692e2b55 | p7@Il18r1 |
| 6.2e-56 | FFCP PHASE1:Mm9::chr14:70921265..70921285,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr14:70921265..70921285, - |
| 6.2e-56 | FFCP PHASE2:Mm9::chr1:184610062..184610074,+#_46c8cdfa65ba661b6bafb762524ecbea | p@chr1:184610062..184610074, + |
| 6.2e-56 | FFCP PHASE2:Mm9::chr2:66524237..66524246,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr2:66524237..66524246, - |
| 6.2e-56 | FFCP PHASE1:Mm9::chr2:164374820..164374835,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr2:164374820..164374835, - |
| 6.2e-56 | FFCP PHASE1:Mm9::chr1:184610062..184610074,+#_46c8cdfa65ba661b6bafb762524ecbea | p@chr1:184610062..184610074, + |
| 6.2e-56 | FFCP PHASE1:Mm9::chr6:72256828..72256859,+#_46c8cdfa65ba661b6bafb762524ecbea | p3@Sftpb |
| 6.2e-56 | FFCP PHASE2:Mm9::chr2:164374820..164374835,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr2:164374820..164374835, - |
| 6.2e-56 | FFCP PHASE2:Mm9::chr6:72256828..72256859,+#_46c8cdfa65ba661b6bafb762524ecbea | p3@Sftpb |
| 6.2e-56 | FFCP PHASE2:Mm9::chr14:70922576..70922589,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr14:70922576..70922589, - |
| 6.2e-56 | FFCP PHASE1:Mm9::chr6:72255924..72255936,+#_46c8cdfa65ba661b6bafb762524ecbea | p4@Sftpb |
| 6.2e-56 | FFCP PHASE1:Mm9::chr14:70922576..70922589,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr14:70922576..70922589, - |
| 6.2e-56 | FFCP PHASE1:Mm9::chr2:66524237..66524246,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr2:66524237..66524246, - |
| 6.2e-56 | FFCP PHASE2:Mm9::chr6:72255924..72255936,+#_46c8cdfa65ba661b6bafb762524ecbea | p4@Sftpb |
| 6.2e-56 | FFCP PHASE2:Mm9::chr14:70921265..70921285,-#_46c8cdfa65ba661b6bafb762524ecbea | p@chr14:70921265..70921285, - |
| 9.42e-56 | FFCP PHASE2:Mm9::chr5:120282691..120282701,+#_4ce6f9458bc740eca8bd57c626ebe2bb | p@chr5:120282691..120282701, + |
| 9.42e-56 | FFCP PHASE1:Mm9::chr5:120282691..120282701,+#_4ce6f9458bc740eca8bd57c626ebe2bb | p@chr5:120282691..120282701, + |
| 1.34e-54 | FFCP PHASE1:Mm9::chr12:57636911..57636924,-#_23bd5df99a8aed1772e46bf19aaa8982 | p@chr12:57636911..57636924, - |
| 1.34e-54 | FFCP PHASE2:Mm9::chr12:57636911..57636924,-#_23bd5df99a8aed1772e46bf19aaa8982 | p@chr12:57636911..57636924, - |
| 3.97e-54 | FFCP PHASE2:Mm9::chr12:57630443..57630450,-#_99e05a892d127ddd77d19dfbdf1e8586 | p4@E030019B13Rik |
| 3.97e-54 | FFCP PHASE1:Mm9::chr12:57630443..57630450,-#_99e05a892d127ddd77d19dfbdf1e8586 | p4@E030019B13Rik |
| 1.46e-52 | FFCP PHASE1:Mm9::chr12:57623172..57623185,-#_40d0b7b3dca18a3fde25590314adc11f | p@chr12:57623172..57623185, - |
| 1.46e-52 | FFCP PHASE2:Mm9::chr14:70922007..70922052,+#_40d0b7b3dca18a3fde25590314adc11f | p@chr14:70922007..70922052, + |
| 1.46e-52 | FFCP PHASE1:Mm9::chr14:70922007..70922052,+#_40d0b7b3dca18a3fde25590314adc11f | p@chr14:70922007..70922052, + |
| 1.46e-52 | FFCP PHASE2:Mm9::chr12:57623172..57623185,-#_40d0b7b3dca18a3fde25590314adc11f | p@chr12:57623172..57623185, - |
| 1.62e-52 | FFCP PHASE2:Mm9::chr5:28785436..28785450,-#_8f9a62f520bc0c8c1f78c90fbc44dafc | p@chr5:28785436..28785450, - |
| 1.62e-52 | FFCP PHASE1:Mm9::chr5:28785436..28785450,-#_8f9a62f520bc0c8c1f78c90fbc44dafc | p@chr5:28785436..28785450, - |
| 1.8e-52 | FFCP PHASE2:Mm9::chr14:70922459..70922482,-#_1a13d54053d8281e38b194b1e135357c | p@chr14:70922459..70922482, - |
| 1.8e-52 | FFCP PHASE1:Mm9::chr14:70922459..70922482,-#_1a13d54053d8281e38b194b1e135357c | p@chr14:70922459..70922482, - |
| 5.65e-52 | FFCP PHASE1:Mm9::chr16:22439804..22439806,-#_97ead127c07e800286dffa2a369adc14 | p4@Etv5 |
| 5.65e-52 | FFCP PHASE2:Mm9::chr16:22439804..22439806,-#_97ead127c07e800286dffa2a369adc14 | p4@Etv5 |
| 1.97e-51 | FFCP PHASE2:Mm9::chr14:70923240..70923251,-#_556154d2a2b49a827e33f35b83aa1e49 | p@chr14:70923240..70923251, - |
| 1.97e-51 | FFCP PHASE1:Mm9::chr14:70923240..70923251,-#_556154d2a2b49a827e33f35b83aa1e49 | p@chr14:70923240..70923251, - |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72263977..72263993,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72263977..72263993, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr14:70922486..70922510,-#_556154d2a2b49a827e33f35b83aa1e49 | p@chr14:70922486..70922510, - |
| 1.97e-51 | FFCP PHASE1:Mm9::chr14:70922486..70922510,-#_556154d2a2b49a827e33f35b83aa1e49 | p@chr14:70922486..70922510, - |
| 1.97e-51 | FFCP PHASE1:Mm9::chr12:57376690..57376716,-#_556154d2a2b49a827e33f35b83aa1e49 | p@chr12:57376690..57376716, - |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72264890..72264911,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72264890..72264911, + |
| 1.97e-51 | FFCP PHASE1:Mm9::chr16:19706386..19706390,-#_556154d2a2b49a827e33f35b83aa1e49 | p4@Lamp3 |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72259797..72259814,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72259797..72259814, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr12:57376690..57376716,-#_556154d2a2b49a827e33f35b83aa1e49 | p@chr12:57376690..57376716, - |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72259797..72259814,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72259797..72259814, + |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72264890..72264911,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72264890..72264911, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr6:72264418..72264441,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72264418..72264441, + |
| 1.97e-51 | FFCP PHASE2:Mm9::chr16:19706386..19706390,-#_556154d2a2b49a827e33f35b83aa1e49 | p4@Lamp3 |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72263977..72263993,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72263977..72263993, + |
| 1.97e-51 | FFCP PHASE1:Mm9::chr6:72264418..72264441,+#_556154d2a2b49a827e33f35b83aa1e49 | p@chr6:72264418..72264441, + |
| 2.21e-51 | FFCP PHASE1:Mm9::chr6:72264609..72264653,-#_09246a3f85b885ea72a50e5125ad4747 | p@chr6:72264609..72264653, - |
| 2.21e-51 | FFCP PHASE2:Mm9::chr6:72264609..72264653,-#_09246a3f85b885ea72a50e5125ad4747 | p@chr6:72264609..72264653, - |
| 2.47e-51 | FFCP PHASE2:Mm9::chr6:129378567..129378573,-#_679ba68eb6d87d304ea3e8b852b05f4d | p@chr6:129378567..129378573, - |
| 2.47e-51 | FFCP PHASE1:Mm9::chr6:129378567..129378573,-#_679ba68eb6d87d304ea3e8b852b05f4d | p@chr6:129378567..129378573, - |
| 3.74e-51 | FFCP PHASE1:Mm9::chr3:122432836..122432847,+#_2dae207f6ae6439cd6924ca7fb4dd507 | p16@Pde5a |
| 3.74e-51 | FFCP PHASE2:Mm9::chr3:122432836..122432847,+#_2dae207f6ae6439cd6924ca7fb4dd507 | p16@Pde5a |
| 5.44e-51 | FFCP PHASE1:Mm9::chr12:57637595..57637608,-#_fbdcdb337645032d6b1e679f335cd8cd | p7@Nkx2-1 |
| 5.44e-51 | FFCP PHASE2:Mm9::chr12:57637595..57637608,-#_fbdcdb337645032d6b1e679f335cd8cd | p7@Nkx2-1 |
