CL:0000839: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|id=CL:0000839 | |id=CL:0000839 | ||
|name=myeloid lineage restricted progenitor cell | |name=myeloid lineage restricted progenitor cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] | |def="A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] | ||
|xref=BTO:0004730;;FMA:70339 | |xref=BTO:0004730;;FMA:70339 | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
| Line 20: | Line 19: | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:26, 26 June 2012
| Name: | myeloid lineage restricted progenitor cell | ||
|---|---|---|---|
| Namespace: | cell;;efo | ||
| Definition: | "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] | ||
| Xrefs: |
| ||
| Synonyms: | "myeloid progenitor cell" BROAD [] | ||
| Comments: | Note that this is a class of cell types, not an identified single cell type. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002031(hematopoietic lineage restricted progenitor cell) |
|---|
Children
| is a: | CL:0000038 (erythroid progenitor cell),CL:0000553 (megakaryocyte progenitor cell),CL:0000831 (mast cell progenitor),CL:0002191 (granulocytopoietic cell),CL:0002194 (monopoietic cell) |
|---|---|
| disjoint from: | CL:0000838 (lymphoid lineage restricted progenitor cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12132-128D8 (promyelocytes/myelocytes PMC, donor1)
- 12136-128E3 (promyelocytes/myelocytes PMC, donor2)
- 12140-128E7 (promyelocytes/myelocytes PMC, donor3)
Mouse (Mus musculus)
- 12132-128D8 (promyelocytes/myelocytes PMC, donor1)
- 12136-128E3 (promyelocytes/myelocytes PMC, donor2)
- 12140-128E7 (promyelocytes/myelocytes PMC, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000839 (myeloid lineage restricted progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.37e-139 | FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_5aabf7923e583837cb63e7981ec7f267 | p@chr1:161187824..161187847, + |
| 7.37e-139 | FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_5aabf7923e583837cb63e7981ec7f267 | p@chr1:161187824..161187847, + |
| 1.43e-133 | FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_79102feaf9ff97fc4816e586a829713e | p@chr1:161188661..161188679, + |
| 1.43e-133 | FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_79102feaf9ff97fc4816e586a829713e | p@chr1:161188661..161188679, + |
| 3.74e-131 | FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_771ba14ea33acf3b6d9234885db9c5f2 | p@chr7:77050554..77050601, + |
| 3.74e-131 | FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_771ba14ea33acf3b6d9234885db9c5f2 | p@chr7:77050554..77050601, + |
| 7.56e-130 | FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_12dd544b32f0b42d2316ad8b87fac505 | p@chr1:161188746..161188758, + |
| 7.56e-130 | FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_12dd544b32f0b42d2316ad8b87fac505 | p@chr1:161188746..161188758, + |
| 7.5e-129 | FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_f059289cb1061b358c6c1cb49c289fdb | p@chr17:7482481..7482508, - |
| 7.5e-129 | FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_f059289cb1061b358c6c1cb49c289fdb | p@chr17:7482481..7482508, - |
| 1.42e-128 | FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_20038047ec35d0b54b43f6e99155484a | p5@IFI30 |
| 1.42e-128 | FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_20038047ec35d0b54b43f6e99155484a | p5@IFI30 |
| 1.35e-127 | FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_e7211977ef5931768cf940b2437f990a | p7@EMILIN2 |
| 1.35e-127 | FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_e7211977ef5931768cf940b2437f990a | p7@EMILIN2 |
| 7.64e-125 | FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_dcd50a1a4413a216e182e574cde42eca | p@chr16:50313426..50313459, + |
| 7.64e-125 | FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_dcd50a1a4413a216e182e574cde42eca | p@chr16:50313426..50313459, + |
| 2.54e-124 | FFCP PHASE2:Hg19::chr5:180242646..180242657,-#_69b7286204772ec15ffe89931983bd94 | p15@MGAT1 |
| 2.54e-124 | FFCP PHASE1:Hg19::chr5:180242646..180242657,-#_69b7286204772ec15ffe89931983bd94 | p15@MGAT1 |
| 4.13e-124 | FFCP PHASE2:Hg19::chr19:18288828..18288861,+#_d86758d15479b1b06476a096973d47cb | p7@IFI30 |
| 4.13e-124 | FFCP PHASE1:Hg19::chr19:18288828..18288861,+#_d86758d15479b1b06476a096973d47cb | p7@IFI30 |
| 1.24e-123 | FFCP PHASE2:Hg19::chr1:111743000..111743011,+#_dce24a613ab2ffa7e01464172da4ba5f | p8@CHI3L2 |
| 1.24e-123 | FFCP PHASE1:Hg19::chr1:111743000..111743011,+#_dce24a613ab2ffa7e01464172da4ba5f | p8@CHI3L2 |
| 1.56e-120 | FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_55732762c3a30c769c446656e18f4500 | p1@CYP1B1-AS1 |
| 1.56e-120 | FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_55732762c3a30c769c446656e18f4500 | p1@CYP1B1-AS1 |
| 1.66e-120 | FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_cd346cf73de4551a807e20c1d7d2d354 | p@chr15:65174546..65174583, - |
| 1.66e-120 | FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_cd346cf73de4551a807e20c1d7d2d354 | p@chr15:65174546..65174583, - |
| 1.31e-119 | FFCP PHASE2:Hg19::chr4:185314125..185314143,-#_57b9108246cd79ac1923065b59e76e64 | p@chr4:185314125..185314143, - |
| 1.31e-119 | FFCP PHASE1:Hg19::chr4:185314125..185314143,-#_57b9108246cd79ac1923065b59e76e64 | p@chr4:185314125..185314143, - |
| 5.01e-119 | FFCP PHASE1:Hg19::chr3:149531627..149531651,+#_b09d923a52bf043399978f2abe21176d | p7@RNF13 |
| 5.01e-119 | FFCP PHASE2:Hg19::chr3:149531627..149531651,+#_b09d923a52bf043399978f2abe21176d | p7@RNF13 |
| 8.73e-119 | FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_becc2fd351cb4bb202771b330666cae0 | p@chr1:161188686..161188721, + |
| 8.73e-119 | FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_becc2fd351cb4bb202771b330666cae0 | p@chr1:161188686..161188721, + |
| 1.53e-118 | FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_325e85aee2296721bd2a437077a6553f | p@chr2:119726719..119726744, + |
| 1.53e-118 | FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_325e85aee2296721bd2a437077a6553f | p@chr2:119726719..119726744, + |
| 4.06e-118 | FFCP PHASE2:Hg19::chr17:40168698..40168726,-#_834a4a4bcd3fd38fb63c3a7282f2abea | p1@AK126179 |
| 4.06e-118 | FFCP PHASE1:Hg19::chr17:40168698..40168726,-#_834a4a4bcd3fd38fb63c3a7282f2abea | p1@AK126179 |
| 6.99e-118 | FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_df9f4ff0435ee43cf7fd6552605165e5 | p1@ENST00000425320 |
| 6.99e-118 | FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_df9f4ff0435ee43cf7fd6552605165e5 | p1@ENST00000425320 |
| 9.58e-118 | FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_c755e8de4d2add587e6ebf1d62080969 | p@chr19:18286116..18286156, + |
| 9.58e-118 | FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_c755e8de4d2add587e6ebf1d62080969 | p@chr19:18286116..18286156, + |
| 1.24e-117 | FFCP PHASE2:Hg19::chr4:185314151..185314178,-#_a650908a55d05f1da42a1d8ae1570ac6 | p@chr4:185314151..185314178, - |
| 1.24e-117 | FFCP PHASE1:Hg19::chr4:185314151..185314178,-#_a650908a55d05f1da42a1d8ae1570ac6 | p@chr4:185314151..185314178, - |
| 1.57e-117 | FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_b9494679c5c4c5369bab8bfcbc55f853 | p@chr2:145429606..145429658, + |
| 1.57e-117 | FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_b9494679c5c4c5369bab8bfcbc55f853 | p@chr2:145429606..145429658, + |
| 4.69e-117 | FFCP PHASE1:Hg19::chr19:18288064..18288080,+#_8c34cf1568ae3171fd276e08b353308d | p@chr19:18288064..18288080, + |
| 4.69e-117 | FFCP PHASE2:Hg19::chr19:18288064..18288080,+#_8c34cf1568ae3171fd276e08b353308d | p@chr19:18288064..18288080, + |
| 6.33e-117 | FFCP PHASE1:Hg19::chr17:72542163..72542182,-#_a6eeada5c568be745780f897812bfe5d | p2@CD300C |
| 6.33e-117 | FFCP PHASE2:Hg19::chr17:72542163..72542182,-#_a6eeada5c568be745780f897812bfe5d | p2@CD300C |
| 1.94e-116 | FFCP PHASE2:Hg19::chr1:161188826..161188842,+#_7ae75bece9d54a6e5e44e0c893856c3d | p@chr1:161188826..161188842, + |
| 1.94e-116 | FFCP PHASE1:Hg19::chr1:161188826..161188842,+#_7ae75bece9d54a6e5e44e0c893856c3d | p@chr1:161188826..161188842, + |
| 2.02e-116 | FFCP PHASE1:Hg19::chr4:185314188..185314207,-#_edab46ab24dda7d4606a53986414e6ce | p@chr4:185314188..185314207, - |
| 2.02e-116 | FFCP PHASE2:Hg19::chr4:185314188..185314207,-#_edab46ab24dda7d4606a53986414e6ce | p@chr4:185314188..185314207, - |
| 2.06e-116 | FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_ce17be7aee1f2f70e29a234c9264b54b | p@chrX:37664331..37664352, + |
| 2.06e-116 | FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_ce17be7aee1f2f70e29a234c9264b54b | p@chrX:37664331..37664352, + |
| 2.39e-116 | FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_792e21eaa596bcaaff40ad7cec006a11 | p8@CTSS |
| 2.39e-116 | FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_792e21eaa596bcaaff40ad7cec006a11 | p8@CTSS |
| 1.34e-115 | FFCP PHASE1:Hg19::chr8:116588888..116588904,+#_b604446f45a133ff2a1f348e89a8c1fe | p@chr8:116588888..116588904, + |
| 1.34e-115 | FFCP PHASE2:Hg19::chr8:116588888..116588904,+#_b604446f45a133ff2a1f348e89a8c1fe | p@chr8:116588888..116588904, + |
| 2.12e-115 | FFCP PHASE2:Hg19::chr4:159727272..159727307,+#_13c8636f815a2dc35736d3b5e52538ff | p7@FNIP2 |
| 2.12e-115 | FFCP PHASE1:Hg19::chr4:159727272..159727307,+#_13c8636f815a2dc35736d3b5e52538ff | p7@FNIP2 |
| 1.16e-114 | FFCP PHASE2:Hg19::chr20:1517991..1518011,-#_45798ea27607ad7ea2a78ffb906566aa | p@chr20:1517991..1518011, - |
| 1.16e-114 | FFCP PHASE1:Hg19::chr20:1517991..1518011,-#_45798ea27607ad7ea2a78ffb906566aa | p@chr20:1517991..1518011, - |
| 1.61e-114 | FFCP PHASE2:Hg19::chr4:3387239..3387324,-#_2c8f2579bcd66de664ec92280ac430e6 | p@chr4:3387239..3387324, - |
| 1.61e-114 | FFCP PHASE1:Hg19::chr4:3387239..3387324,-#_2c8f2579bcd66de664ec92280ac430e6 | p@chr4:3387239..3387324, - |
| 3.03e-114 | FFCP PHASE1:Hg19::chr19:18288914..18288931,-#_97fdf998513a2fd6d0534b4684fa14be | p5@CU676849, p5@CU689079 |
| 3.03e-114 | FFCP PHASE2:Hg19::chr19:18288914..18288931,-#_97fdf998513a2fd6d0534b4684fa14be | p5@CU676849, p5@CU689079 |
| 6.75e-114 | FFCP PHASE1:Hg19::chr19:18288514..18288554,+#_f09f57824752216d3ed2c293b137b9ac | p6@IFI30 |
| 6.75e-114 | FFCP PHASE2:Hg19::chr19:18288514..18288554,+#_f09f57824752216d3ed2c293b137b9ac | p6@IFI30 |
| 8.9e-114 | FFCP PHASE2:Hg19::chr5:180242576..180242585,-#_fbd015364ccdfa4cb3907319ce77a8ff | p12@MGAT1 |
| 8.9e-114 | FFCP PHASE1:Hg19::chr5:180242576..180242585,-#_fbd015364ccdfa4cb3907319ce77a8ff | p12@MGAT1 |
| 6.02e-113 | FFCP PHASE2:Hg19::chr17:7483714..7483726,+#_4a1295e6cd2865340d949e9b3bffc32c | p@chr17:7483714..7483726, + |
| 6.02e-113 | FFCP PHASE1:Hg19::chr17:7483714..7483726,+#_4a1295e6cd2865340d949e9b3bffc32c | p@chr17:7483714..7483726, + |
| 1.37e-112 | FFCP PHASE1:Hg19::chr1:161187774..161187799,+#_d8a14b4b90bd21799cce160a5771a1b5 | p@chr1:161187774..161187799, + |
| 1.37e-112 | FFCP PHASE2:Hg19::chr1:161187774..161187799,+#_d8a14b4b90bd21799cce160a5771a1b5 | p@chr1:161187774..161187799, + |
| 3.6e-112 | FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_8f0e5b4f101a302f83471c65b4f4098c | p@chr14:103587759..103587770, + |
| 3.6e-112 | FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_8f0e5b4f101a302f83471c65b4f4098c | p@chr14:103587759..103587770, + |
| 4.38e-112 | FFCP PHASE1:Hg19::chr19:51625924..51625942,+#_8ab81d4001fa95e3c5f35ef9c28af576 | p@chr19:51625924..51625942, + |
| 4.38e-112 | FFCP PHASE2:Hg19::chr19:51625924..51625942,+#_8ab81d4001fa95e3c5f35ef9c28af576 | p@chr19:51625924..51625942, + |
| 4.49e-112 | FFCP PHASE2:Hg19::chr22:46998103..46998127,-#_1d3e42d4a69184213853612449e04416 | p@chr22:46998103..46998127, - |
| 4.49e-112 | FFCP PHASE1:Hg19::chr22:46998103..46998127,-#_1d3e42d4a69184213853612449e04416 | p@chr22:46998103..46998127, - |
| 7.77e-112 | FFCP PHASE2:Hg19::chr4:185266972..185267007,+#_5dcceab1d3a1dfdb8d46723b7f679848 | p@chr4:185266972..185267007, + |
| 7.77e-112 | FFCP PHASE1:Hg19::chr4:185266972..185267007,+#_5dcceab1d3a1dfdb8d46723b7f679848 | p@chr4:185266972..185267007, + |
| 1.05e-111 | FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_53e1a71abd0a49cb68fc59414c07076c | p@chr19:18285955..18285972, + |
| 1.05e-111 | FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_53e1a71abd0a49cb68fc59414c07076c | p@chr19:18285955..18285972, + |
| 4.87e-111 | FFCP PHASE2:Hg19::chr15:59469817..59469836,+#_dfaac7537c7725eebd8079f1103018a6 | p@chr15:59469817..59469836, + |
| 4.87e-111 | FFCP PHASE1:Hg19::chr15:59469817..59469836,+#_dfaac7537c7725eebd8079f1103018a6 | p@chr15:59469817..59469836, + |
| 5.17e-111 | FFCP PHASE1:Hg19::chr4:7655804..7655844,-#_109b7c6e2f6e39f1c29fc3d14f84a359 | p@chr4:7655804..7655844, - |
| 5.17e-111 | FFCP PHASE2:Hg19::chr4:7655804..7655844,-#_109b7c6e2f6e39f1c29fc3d14f84a359 | p@chr4:7655804..7655844, - |
| 8.34e-111 | FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_a1e41edb1c0f6734e37bebda618774ad | p2@ZEB2-AS1 |
| 8.34e-111 | FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_a1e41edb1c0f6734e37bebda618774ad | p2@ZEB2-AS1 |
| 1.03e-110 | FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_7bc221588adb63bce6249adfa21a62be | p4@ZNF185 |
| 1.03e-110 | FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_7bc221588adb63bce6249adfa21a62be | p4@ZNF185 |
| 1.37e-110 | FFCP PHASE2:Hg19::chr7:2832730..2832791,+#_74ace9837a5e0648dc8b5da3d360b2c8 | p@chr7:2832730..2832791, + |
| 1.37e-110 | FFCP PHASE1:Hg19::chr7:2832730..2832791,+#_74ace9837a5e0648dc8b5da3d360b2c8 | p@chr7:2832730..2832791, + |
| 1.56e-110 | FFCP PHASE2:Hg19::chr20:1517945..1517963,-#_0c5de6962764048c34357cd2d47b9bfc | p@chr20:1517945..1517963, - |
| 1.56e-110 | FFCP PHASE1:Hg19::chr20:1517945..1517963,-#_0c5de6962764048c34357cd2d47b9bfc | p@chr20:1517945..1517963, - |
| 8.94e-110 | FFCP PHASE2:Hg19::chr5:77845080..77845099,-#_5116408089658b41e9c4109208a0a57b | p10@LHFPL2 |
| 8.94e-110 | FFCP PHASE1:Hg19::chr5:77845080..77845099,-#_5116408089658b41e9c4109208a0a57b | p10@LHFPL2 |
| 1.06e-109 | FFCP PHASE2:Hg19::chr2:129283966..129283970,+#_34b7569b005ae72ddc32f0b31c023b00 | p@chr2:129283966..129283970, + |
| 1.06e-109 | FFCP PHASE1:Hg19::chr2:129283966..129283970,+#_34b7569b005ae72ddc32f0b31c023b00 | p@chr2:129283966..129283970, + |
