CL:0002681: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002681
|name=kidney cortical cell
|namespace=cell
|def=
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|is_a=CL:1000497
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 17:28, 26 June 2012
| Name: | kidney cortical cell |
|---|---|
| Namespace: | cell |
| Created by: | terryh |
| Creation date: | 2011-10-25T03:49:41Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:1000497(kidney cell) |
|---|
Children
| is a: | CL:0002584 (renal cortical epithelial cell),CL:1000618 (juxtaglomerular complex cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
... further results Mouse (Mus musculus)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002681 (kidney cortical cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.8e-58 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_be5c7f0d2b230cee508970350e6b7da8 | p@chr2:693380..693398, + |
| 4.8e-58 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_be5c7f0d2b230cee508970350e6b7da8 | p@chr2:693380..693398, + |
| 4.05e-52 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_53aca6883dfb74b9d0869f44ab5f5b69 | p7@HOXA10 |
| 4.05e-52 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_53aca6883dfb74b9d0869f44ab5f5b69 | p7@HOXA10 |
| 1.06e-50 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_74b37f2dfe62e458ab48f9e26752c3b1 | p@chr5:74244100..74244117, + |
| 1.06e-50 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_74b37f2dfe62e458ab48f9e26752c3b1 | p@chr5:74244100..74244117, + |
| 5.59e-50 | FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_339d185baf8a9a278517569b84217e44 | p2@PLA2G2F |
| 5.59e-50 | FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_339d185baf8a9a278517569b84217e44 | p2@PLA2G2F |
| 6.11e-42 | FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_be6d3ac9e0a39ff71a9d420269a2f59f | p@chr16:86768403..86768437, + |
| 6.11e-42 | FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_be6d3ac9e0a39ff71a9d420269a2f59f | p@chr16:86768403..86768437, + |
| 3.58e-41 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_118d654b8cedd8865499fa509a9f8652 | p4@MEGF11 |
| 3.58e-41 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_118d654b8cedd8865499fa509a9f8652 | p4@MEGF11 |
| 1.0e-40 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_85e67dd00bea930892ccb588bf82d699 | p1@ENST00000413103 |
| 1.0e-40 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_85e67dd00bea930892ccb588bf82d699 | p1@ENST00000413103 |
| 6.83e-40 | FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_cc671f0aab62e14e0f3175c10b38ccf3 | p@chr7:140227303..140227330, - |
| 6.83e-40 | FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_cc671f0aab62e14e0f3175c10b38ccf3 | p@chr7:140227303..140227330, - |
| 9.22e-40 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_80955c5ae69e349d142505541db48179 | p3@PAX2 |
| 9.22e-40 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_80955c5ae69e349d142505541db48179 | p3@PAX2 |
| 1.79e-39 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_5688483b86100329624263f4dd34d46b | p@chr18:3456189..3456200, + |
| 1.79e-39 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_5688483b86100329624263f4dd34d46b | p@chr18:3456189..3456200, + |
| 4.5e-38 | FFCP PHASE2:Hg19::chr6:30890456..30890482,+#_6a34be03897d247f38b7066393d0643b | p11@VARS2 |
| 4.5e-38 | FFCP PHASE1:Hg19::chr6:30890456..30890482,+#_6a34be03897d247f38b7066393d0643b | p11@VARS2 |
| 8.61e-38 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_6293049d85c0e496c3d207e51f577e05 | p@chr2:120409486..120409492, + |
| 8.61e-38 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_6293049d85c0e496c3d207e51f577e05 | p@chr2:120409486..120409492, + |
| 5.07e-37 | FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_d5c659695dceacf5d701189225fdd88d | p2@AB527789 |
| 5.07e-37 | FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_d5c659695dceacf5d701189225fdd88d | p2@AB527789 |
| 6.37e-37 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_77d569951a1f9825d68722bf353193d4 | p@chr1:1100457..1100470, + |
| 6.37e-37 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_77d569951a1f9825d68722bf353193d4 | p@chr1:1100457..1100470, + |
| 1.63e-36 | FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_94c9928b9d586607911eec00a419d02b | p6@LRRN4 |
| 1.63e-36 | FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_94c9928b9d586607911eec00a419d02b | p6@LRRN4 |
| 2.81e-35 | FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_21dd759b8822655efb65b39cdbfbf258 | p3@HNF1B |
| 2.81e-35 | FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_21dd759b8822655efb65b39cdbfbf258 | p3@HNF1B |
| 4.37e-35 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_4f84e703fba8d5ecda60292ed4d2b737 | p4@AIF1L |
| 4.37e-35 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_4f84e703fba8d5ecda60292ed4d2b737 | p4@AIF1L |
| 1.19e-34 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_5b6bd808d957730d22ce4ff983c6baaa | p4@PAX2 |
| 1.19e-34 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_5b6bd808d957730d22ce4ff983c6baaa | p4@PAX2 |
| 5.98e-34 | FFCP PHASE2:Hg19::chr5:167718782..167718785,+#_3acf62c15b953bc22bb229851fc3df05 | p10@WWC1 |
| 5.98e-34 | FFCP PHASE1:Hg19::chr5:167718782..167718785,+#_3acf62c15b953bc22bb229851fc3df05 | p10@WWC1 |
| 2.93e-33 | FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_5e99fb3a252f1606f60a7c495d4be6d3 | p2@LRRN4 |
| 2.93e-33 | FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_5e99fb3a252f1606f60a7c495d4be6d3 | p2@LRRN4 |
| 1.44e-32 | FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_a1677dae13f1daf5dcdc6fdab5bc876c | p2@CLDN6 |
| 1.44e-32 | FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_a1677dae13f1daf5dcdc6fdab5bc876c | p2@CLDN6 |
| 1.85e-32 | FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_3850bd90e5afb3c608c5295fb20f164c | p5@LRRN4 |
| 1.85e-32 | FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_3850bd90e5afb3c608c5295fb20f164c | p5@LRRN4 |
| 4.69e-32 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_8e2b286225d8ed77d600ef7ab3cffebb | p@chr7:140227349..140227360, - |
| 4.69e-32 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_8e2b286225d8ed77d600ef7ab3cffebb | p@chr7:140227349..140227360, - |
| 1.23e-31 | FFCP PHASE1:Hg19::chr17:27970385..27970397,-#_67c455c7cced73ccbf14f8b7244ac5aa | p@chr17:27970385..27970397, - |
| 1.23e-31 | FFCP PHASE2:Hg19::chr17:27970385..27970397,-#_67c455c7cced73ccbf14f8b7244ac5aa | p@chr17:27970385..27970397, - |
| 2.99e-30 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_3e47810af720bbfb0a8e4aa2dd354b02 | p@chr15:85403302..85403304, + |
| 2.99e-30 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_3e47810af720bbfb0a8e4aa2dd354b02 | p@chr15:85403302..85403304, + |
| 3.02e-30 | FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_25b2cf3372bea6057729bba7e23f7cb5 | p2@B3GALT5 |
| 3.02e-30 | FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_25b2cf3372bea6057729bba7e23f7cb5 | p2@B3GALT5 |
| 1.06e-29 | FFCP PHASE1:Hg19::chr19:50390837..50390847,+#_e81e99d179045c0af2ed600a241dbcd5 | p@chr19:50390837..50390847, + |
| 1.06e-29 | FFCP PHASE2:Hg19::chr19:50390837..50390847,+#_e81e99d179045c0af2ed600a241dbcd5 | p@chr19:50390837..50390847, + |
| 1.26e-29 | FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_7422b40bfd908d4d2e5dd7673a7bb411 | p3@LRRN4 |
| 1.26e-29 | FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_7422b40bfd908d4d2e5dd7673a7bb411 | p3@LRRN4 |
| 1.54e-29 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_aee733494d5a0258750c1cff57172b94 | p@chr17:171147..171161, + |
| 1.54e-29 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_aee733494d5a0258750c1cff57172b94 | p@chr17:171147..171161, + |
| 3.11e-29 | FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_c7d54908387f44a1be5d7b6ac7f3baa3 | p@chr21:46826248..46826282, - |
| 3.11e-29 | FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_c7d54908387f44a1be5d7b6ac7f3baa3 | p@chr21:46826248..46826282, - |
| 4.34e-29 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_7454260a86fdb57d9d4ba78626b124d6 | p1@ENST00000418041, p1@ENST00000443104 |
| 4.34e-29 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_7454260a86fdb57d9d4ba78626b124d6 | p1@ENST00000418041, p1@ENST00000443104 |
| 1.58e-28 | FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_4926faaac55f2ac67fcd2174091040f5 | p3@AIF1L |
| 1.58e-28 | FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_4926faaac55f2ac67fcd2174091040f5 | p3@AIF1L |
| 2.94e-28 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_70cfade61b2b7c8e677d22dd01c63970 | p@chr7:7606139..7606151, - |
| 2.94e-28 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_70cfade61b2b7c8e677d22dd01c63970 | p@chr7:7606139..7606151, - |
| 6.08e-28 | FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_de858ffeca668dd9d0c0d6c9bb1313c6 | p1@ENST00000444849 |
| 6.08e-28 | FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_de858ffeca668dd9d0c0d6c9bb1313c6 | p1@ENST00000444849 |
| 1.11e-27 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_9e221a3386fe2d2b809549f0d77bd52c | p2@PAX2 |
| 1.11e-27 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_9e221a3386fe2d2b809549f0d77bd52c | p2@PAX2 |
| 2.09e-27 | FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_29f449e29d99570a3dd101c05123add0 | p16@TJP2 |
| 2.09e-27 | FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_29f449e29d99570a3dd101c05123add0 | p16@TJP2 |
| 2.35e-27 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_d3880d5b350874b383bd71a7253ccde6 | p@chr16:86604624..86604648, + |
| 2.35e-27 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_d3880d5b350874b383bd71a7253ccde6 | p@chr16:86604624..86604648, + |
| 3.45e-27 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_4456118844137abfdb3b78a4e26975f9 | p7@LRRN4 |
| 3.45e-27 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_4456118844137abfdb3b78a4e26975f9 | p7@LRRN4 |
| 7.25e-27 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_59db684392678092d125e5fd5ade5159 | p@chr17:171082..171101, + |
| 7.25e-27 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_59db684392678092d125e5fd5ade5159 | p@chr17:171082..171101, + |
| 4.96e-26 | FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_4c3bba65b982f98549d00a5046eef123 | p1@AB527789 |
| 4.96e-26 | FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_4c3bba65b982f98549d00a5046eef123 | p1@AB527789 |
| 7.1e-26 | FFCP PHASE2:Hg19::chr2:108994633..108994650,+#_c76fa72f110dcd701ec8a482bd861ced | p4@SULT1C4 |
| 7.1e-26 | FFCP PHASE1:Hg19::chr2:108994633..108994650,+#_c76fa72f110dcd701ec8a482bd861ced | p4@SULT1C4 |
| 9.68e-25 | FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_d7e996521aa98432de9a220ff2bc4275 | p4@DCDC2 |
| 9.68e-25 | FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_d7e996521aa98432de9a220ff2bc4275 | p4@DCDC2 |
| 1.6e-24 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_0bb2eb7e83156d1c699d1b19601aa0af | p16@HOXA10 |
| 1.6e-24 | FFCP PHASE2:Hg19::chr2:177053683..177053697,-#_0bb2eb7e83156d1c699d1b19601aa0af | p1@LOC401022 |
| 1.6e-24 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_0bb2eb7e83156d1c699d1b19601aa0af | p16@HOXA10 |
| 1.6e-24 | FFCP PHASE1:Hg19::chr2:177053683..177053697,-#_0bb2eb7e83156d1c699d1b19601aa0af | p1@LOC401022 |
| 1.66e-24 | FFCP PHASE1:Hg19::chr22:37823036..37823049,-#_d232e27a3a1827f87d7ea6c6c5dfde74 | p1@ENST00000451509 |
| 1.66e-24 | FFCP PHASE2:Hg19::chr22:37823036..37823049,-#_d232e27a3a1827f87d7ea6c6c5dfde74 | p1@ENST00000451509 |
| 1.87e-24 | FFCP PHASE2:Hg19::chr17:46675539..46675551,-#_330cbee8c9f8080ea8a0aaacecb4d38b | p7@HOXB6 |
| 1.87e-24 | FFCP PHASE1:Hg19::chr17:46675539..46675551,-#_330cbee8c9f8080ea8a0aaacecb4d38b | p7@HOXB6 |
| 2.63e-24 | FFCP PHASE2:Hg19::chr13:26619917..26619921,-#_d60b543821e83724dc687c93953f0219 | p@chr13:26619917..26619921, - |
| 2.63e-24 | FFCP PHASE1:Hg19::chr13:26619917..26619921,-#_d60b543821e83724dc687c93953f0219 | p@chr13:26619917..26619921, - |
| 2.91e-24 | FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_f853cf9727353070f85b4c78f9d8e74b | p1@HOXD4 |
| 2.91e-24 | FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_f853cf9727353070f85b4c78f9d8e74b | p1@HOXD4 |
| 2.98e-24 | FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_fb8630d61a8d9477bf16ebcc1ffcd471 | p@chr7:98453821..98453843, - |
| 2.98e-24 | FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_fb8630d61a8d9477bf16ebcc1ffcd471 | p@chr7:98453821..98453843, - |
| 3.49e-24 | FFCP PHASE2:Hg19::chr12:6485243..6485254,-#_a7b5dbc1f1de71024df8225f99beeee4 | p18@SCNN1A |
| 3.49e-24 | FFCP PHASE1:Hg19::chr12:6485243..6485254,-#_a7b5dbc1f1de71024df8225f99beeee4 | p18@SCNN1A |
