UBERON:0001097: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 18: | Line 18: | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001467 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:27, 27 June 2012
| Name: | axillary lymph node | ||
|---|---|---|---|
| Definition: | "The Axillary lymph nodes are of large size, vary from twenty to thirty in number, and may be arranged in the following groups: brachial lymph nodes (or 'lateral') pectoral axillary lymph nodes (or 'anterior') subscapular axillary lymph nodes (or 'posterior') central lymph nodes apical lymph nodes (or 'medial' or 'subclavicular') [WP,unvetted]." [Wikipedia:Axillary_lymph_node, Wikipedia:Axillary_lymph_nodes] | ||
| Xrefs: |
| ||
| Synonyms: |
"axillary node" EXACT [] "nodi lymphoidei axillares" RELATED LATIN [Wikipedia:Axillary_lymph_nodes] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_12771-MA_0000735 | ||
| Subset: | uberon_slim |
Gray607.png]
200px-Gray607.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003968(peripheral lymph node) |
|---|---|
| part_of: | UBERON:0001467(shoulder) |
Children
| is a: | FF:1063-29H9 (accessory axillary lymph node, adult) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1063-29H9 (accessory axillary lymph node, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001097 (axillary lymph node), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:104978425..104978430,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr12:104978425..104978430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:5405967..5405985,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr11:5405967..5405985, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:98457111..98457118,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr15:98457111..98457118, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:32325858..32325865,+#_7311781ac7df6650dc0bd8651cf122c2 | p18@Bach2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:114567506..114567507,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr12:114567506..114567507, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:98457062..98457072,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr15:98457062..98457072, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:32325858..32325865,+#_7311781ac7df6650dc0bd8651cf122c2 | p18@Bach2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:93042811..93042816,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr12:93042811..93042816, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:122604700..122604706,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr4:122604700..122604706, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:37383896..37383899,+#_7311781ac7df6650dc0bd8651cf122c2 | p2@ENSMUST00000172477 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3918216..3918219,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr8:3918216..3918219, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:98457111..98457118,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr15:98457111..98457118, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:37383896..37383899,+#_7311781ac7df6650dc0bd8651cf122c2 | p2@ENSMUST00000172477 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:114567506..114567507,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr12:114567506..114567507, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:5405967..5405985,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr11:5405967..5405985, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:122604700..122604706,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr4:122604700..122604706, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:19235714..19235723,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr16:19235714..19235723, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:73409774..73409819,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr10:73409774..73409819, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:19235714..19235723,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr16:19235714..19235723, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:93042811..93042816,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr12:93042811..93042816, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:104978425..104978430,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr12:104978425..104978430, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:98457062..98457072,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr15:98457062..98457072, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:3918216..3918219,-#_7311781ac7df6650dc0bd8651cf122c2 | p@chr8:3918216..3918219, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:73409774..73409819,+#_7311781ac7df6650dc0bd8651cf122c2 | p@chr10:73409774..73409819, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr1:156901987..156901994,-#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr1:156901987..156901994, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr15:100610674..100610678,+#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr15:100610674..100610678, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr6:129628862..129628871,-#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr6:129628862..129628871, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:152582794..152582807,+#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr2:152582794..152582807, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr3:87316559..87316571,-#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr3:87316559..87316571, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr2:152582794..152582807,+#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr2:152582794..152582807, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr3:87316559..87316571,-#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr3:87316559..87316571, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr6:127022920..127022928,+#_e6bc9db71f86d17bfa59cf806bc885ba | p1@Fgf23 |
| 2.74e-44 | FFCP PHASE1:Mm9::chr1:156901987..156901994,-#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr1:156901987..156901994, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr15:100610674..100610678,+#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr15:100610674..100610678, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr4:130488147..130488154,+#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr4:130488147..130488154, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr6:129628862..129628871,-#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr6:129628862..129628871, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr4:130488147..130488154,+#_e6bc9db71f86d17bfa59cf806bc885ba | p@chr4:130488147..130488154, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr6:127022920..127022928,+#_e6bc9db71f86d17bfa59cf806bc885ba | p1@Fgf23 |
| 7.47e-44 | FFCP PHASE1:Mm9::chr17:73506745..73506750,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr17:73506745..73506750, + |
| 7.47e-44 | FFCP PHASE1:Mm9::chr1:69594451..69594464,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr1:69594451..69594464, - |
| 7.47e-44 | FFCP PHASE2:Mm9::chr17:73506745..73506750,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr17:73506745..73506750, + |
| 7.47e-44 | FFCP PHASE1:Mm9::chr1:156901880..156901891,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr1:156901880..156901891, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr5:111607677..111607689,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr5:111607677..111607689, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr8:22042143..22042150,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p1@Gm15056, p1@LOC100504014 |
| 7.47e-44 | FFCP PHASE1:Mm9::chrX:7157626..7157635,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p3@Foxp3 |
| 7.47e-44 | FFCP PHASE2:Mm9::chr2:70769189..70769223,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr2:70769189..70769223, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chrX:7157626..7157635,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p3@Foxp3 |
| 7.47e-44 | FFCP PHASE2:Mm9::chr2:26524291..26524300,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr2:26524291..26524300, - |
| 7.47e-44 | FFCP PHASE2:Mm9::chr5:111607677..111607689,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr5:111607677..111607689, - |
| 7.47e-44 | FFCP PHASE2:Mm9::chr17:73460572..73460579,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr17:73460572..73460579, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr8:22042143..22042150,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p1@Gm15056, p1@LOC100504014 |
| 7.47e-44 | FFCP PHASE1:Mm9::chr13:83714297..83714301,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr13:83714297..83714301, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr1:156901880..156901891,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr1:156901880..156901891, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr17:73460572..73460579,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr17:73460572..73460579, + |
| 7.47e-44 | FFCP PHASE1:Mm9::chr2:26524291..26524300,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr2:26524291..26524300, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chrX:13200511..13200521,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chrX:13200511..13200521, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr13:83714297..83714301,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr13:83714297..83714301, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr1:69594451..69594464,-#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr1:69594451..69594464, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr2:70769189..70769223,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chr2:70769189..70769223, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chrX:13200511..13200521,+#_554cbdda126dbd4ab8590b1d61d6ea01 | p@chrX:13200511..13200521, + |
| 2.87e-30 | FFCP PHASE1:Mm9::chr10:77555495..77555503,-#_b45339e28c7bceb5351473c884217303 | p@chr10:77555495..77555503, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr1:175421064..175421071,-#_b45339e28c7bceb5351473c884217303 | p@chr1:175421064..175421071, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr16:19236303..19236306,-#_b45339e28c7bceb5351473c884217303 | p@chr16:19236303..19236306, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr10:77555495..77555503,-#_b45339e28c7bceb5351473c884217303 | p@chr10:77555495..77555503, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr9:63685871..63685874,-#_b45339e28c7bceb5351473c884217303 | p@chr9:63685871..63685874, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr17:75917733..75917762,-#_b45339e28c7bceb5351473c884217303 | p@chr17:75917733..75917762, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr9:63685871..63685874,-#_b45339e28c7bceb5351473c884217303 | p@chr9:63685871..63685874, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr16:19236303..19236306,-#_b45339e28c7bceb5351473c884217303 | p@chr16:19236303..19236306, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr3:60276705..60276708,+#_b45339e28c7bceb5351473c884217303 | p35@Mbnl1 |
| 2.87e-30 | FFCP PHASE1:Mm9::chr6:43026981..43026982,-#_b45339e28c7bceb5351473c884217303 | p@chr6:43026981..43026982, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr14:101862396..101862406,-#_b45339e28c7bceb5351473c884217303 | p7@Tbc1d4 |
| 2.87e-30 | FFCP PHASE1:Mm9::chr14:101862396..101862406,-#_b45339e28c7bceb5351473c884217303 | p7@Tbc1d4 |
| 2.87e-30 | FFCP PHASE2:Mm9::chr6:43026981..43026982,-#_b45339e28c7bceb5351473c884217303 | p@chr6:43026981..43026982, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr1:175421064..175421071,-#_b45339e28c7bceb5351473c884217303 | p@chr1:175421064..175421071, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr2:153750777..153750817,+#_b45339e28c7bceb5351473c884217303 | p@chr2:153750777..153750817, + |
| 2.87e-30 | FFCP PHASE2:Mm9::chr3:60276705..60276708,+#_b45339e28c7bceb5351473c884217303 | p35@Mbnl1 |
| 2.87e-30 | FFCP PHASE2:Mm9::chr2:153750777..153750817,+#_b45339e28c7bceb5351473c884217303 | p@chr2:153750777..153750817, + |
| 2.87e-30 | FFCP PHASE1:Mm9::chr17:75917733..75917762,-#_b45339e28c7bceb5351473c884217303 | p@chr17:75917733..75917762, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chrX:7156827..7156838,+#_c2a78b233bd1815f778c2940ccbb68e1 | p2@Foxp3 |
| 5.62e-30 | FFCP PHASE2:Mm9::chr1:69595291..69595300,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr1:69595291..69595300, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chrX:7156827..7156838,+#_c2a78b233bd1815f778c2940ccbb68e1 | p2@Foxp3 |
| 5.62e-30 | FFCP PHASE1:Mm9::chr5:68157953..68157957,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr5:68157953..68157957, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr16:18588911..18588925,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr16:18588911..18588925, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chr10:96058243..96058251,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr10:96058243..96058251, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr1:69595291..69595300,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr1:69595291..69595300, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr10:96058243..96058251,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr10:96058243..96058251, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chr12:3463400..3463409,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr12:3463400..3463409, + |
| 5.62e-30 | FFCP PHASE1:Mm9::chr13:93865596..93865618,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr13:93865596..93865618, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr17:65245146..65245162,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr17:65245146..65245162, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr13:93865596..93865618,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr13:93865596..93865618, + |
| 5.62e-30 | FFCP PHASE1:Mm9::chr1:152303107..152303115,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr1:152303107..152303115, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chr16:18588911..18588925,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr16:18588911..18588925, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chr15:27700724..27700733,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr15:27700724..27700733, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr1:152303107..152303115,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr1:152303107..152303115, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr17:65245146..65245162,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr17:65245146..65245162, + |
| 5.62e-30 | FFCP PHASE1:Mm9::chr12:3463400..3463409,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr12:3463400..3463409, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr5:68157953..68157957,-#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr5:68157953..68157957, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr15:27700724..27700733,+#_c2a78b233bd1815f778c2940ccbb68e1 | p@chr15:27700724..27700733, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr13:24695728..24695736,-#_161199da836a5310ffc2a48d618ad12f | p6@Gm11346 |
| 1.1e-29 | FFCP PHASE1:Mm9::chr16:15705318..15705342,+#_161199da836a5310ffc2a48d618ad12f | p@chr16:15705318..15705342, + |
