CL:0000216: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 18: | Line 18: | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000473 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:00, 27 June 2012
| Name: | Sertoli cell | ||
|---|---|---|---|
| Namespace: | cell;;efo | ||
| Definition: | "A supporting cell projecting inward from the basement membrane of seminiferous tubules. They surround and nourish the developing male germ cells and secrete androgen binding protein. Their tight junctions with the spermatogonia and spermatocytes provide a blood-testis barrier." [MESH:A.05.360.444.849.789] | ||
| Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000511(androgen binding protein secreting cell),CL:0000630(supportive cell),CL:0002625(seminiferous tubule epithelial cell),EFO:0000984(),EFO:0002962() |
|---|---|
| part_of: | UBERON:0000473(testis) |
Children
| derives from: | FF:0000161 (human sertoli cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11255-116F4 (Sertoli Cells, donor1)
- 11333-117F1 (Sertoli Cells, donor2)
Mouse (Mus musculus)
- 11255-116F4 (Sertoli Cells, donor1)
- 11333-117F1 (Sertoli Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000216 (Sertoli cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_7ffaf29c669acb8f627b9ab4e9f59ff3 | p26@BDNF |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_7ffaf29c669acb8f627b9ab4e9f59ff3 | p26@BDNF |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:158450428..158450431,-#_9c44467c7b4c2d0984d0074c240117fc | p9@RARRES1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:227505905..227505906,-#_9c44467c7b4c2d0984d0074c240117fc | p43@CDC42BPA |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:227505905..227505906,-#_9c44467c7b4c2d0984d0074c240117fc | p43@CDC42BPA |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:158450428..158450431,-#_9c44467c7b4c2d0984d0074c240117fc | p9@RARRES1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:54600897..54600899,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr19:54600897..54600899, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:69832864..69832865,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr8:69832864..69832865, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:18206831..18206833,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr7:18206831..18206833, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:69832864..69832865,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr8:69832864..69832865, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:40320572..40320586,-#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr19:40320572..40320586, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:54600897..54600899,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr19:54600897..54600899, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:9519086..9519101,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr2:9519086..9519101, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:40320572..40320586,-#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr19:40320572..40320586, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:193356854..193356864,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr3:193356854..193356864, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:53030077..53030083,-#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr13:53030077..53030083, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:170430340..170430344,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr3:170430340..170430344, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:18206831..18206833,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr7:18206831..18206833, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:193356854..193356864,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr3:193356854..193356864, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:170430340..170430344,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr3:170430340..170430344, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p7@C7orf63 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:9519086..9519101,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr2:9519086..9519101, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_be5d8bde80c8ad8592056c4d8ae7c74e | p7@C7orf63 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:47529304..47529311,-#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr8:47529304..47529311, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:53030077..53030083,-#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr13:53030077..53030083, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:47529304..47529311,-#_be5d8bde80c8ad8592056c4d8ae7c74e | p@chr8:47529304..47529311, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:19551668..19551679,-#_72058c6c6020c2e61683b6cfbe3719ac | p@chr2:19551668..19551679, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:19551668..19551679,-#_72058c6c6020c2e61683b6cfbe3719ac | p@chr2:19551668..19551679, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:15815732..15815744,-#_c3e9baf02264df170bf747a717fc9416 | p21@EPS8 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:98445585..98445594,-#_c3e9baf02264df170bf747a717fc9416 | p22@TMEM130 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:98445585..98445594,-#_c3e9baf02264df170bf747a717fc9416 | p22@TMEM130 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_c3e9baf02264df170bf747a717fc9416 | p@chr3:112931461..112931474, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:197889533..197889548,+#_c3e9baf02264df170bf747a717fc9416 | p@chr1:197889533..197889548, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_c3e9baf02264df170bf747a717fc9416 | p@chr2:72803155..72803204, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:197889533..197889548,+#_c3e9baf02264df170bf747a717fc9416 | p@chr1:197889533..197889548, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:15815732..15815744,-#_c3e9baf02264df170bf747a717fc9416 | p21@EPS8 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_c3e9baf02264df170bf747a717fc9416 | p@chr2:72803155..72803204, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_c3e9baf02264df170bf747a717fc9416 | p@chr3:112931461..112931474, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr21:48080873..48080878,+#_becda03344b0f13264ad788962ee5e62 | p@chr21:48080873..48080878, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:170916991..170916995,-#_becda03344b0f13264ad788962ee5e62 | p@chr3:170916991..170916995, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:170916991..170916995,-#_becda03344b0f13264ad788962ee5e62 | p@chr3:170916991..170916995, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr21:48080873..48080878,+#_becda03344b0f13264ad788962ee5e62 | p@chr21:48080873..48080878, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:1034666..1034675,+#_becda03344b0f13264ad788962ee5e62 | p4@GTPBP4 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_becda03344b0f13264ad788962ee5e62 | p38@PTK2 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_becda03344b0f13264ad788962ee5e62 | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:99984127..99984138,+#_becda03344b0f13264ad788962ee5e62 | p@chr3:99984127..99984138, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_becda03344b0f13264ad788962ee5e62 | p38@PTK2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_becda03344b0f13264ad788962ee5e62 | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:99984127..99984138,+#_becda03344b0f13264ad788962ee5e62 | p@chr3:99984127..99984138, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:90830481..90830492,+#_becda03344b0f13264ad788962ee5e62 | p@chr5:90830481..90830492, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:90830481..90830492,+#_becda03344b0f13264ad788962ee5e62 | p@chr5:90830481..90830492, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:1034666..1034675,+#_becda03344b0f13264ad788962ee5e62 | p4@GTPBP4 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_9b1a35c3254f8e0b9c27612eafcc0452 | p8@TCF21 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr11:114173606..114173612,+#_9b1a35c3254f8e0b9c27612eafcc0452 | p@chr11:114173606..114173612, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr2:177009137..177009140,+#_9b1a35c3254f8e0b9c27612eafcc0452 | p@chr2:177009137..177009140, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr2:177009137..177009140,+#_9b1a35c3254f8e0b9c27612eafcc0452 | p@chr2:177009137..177009140, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr11:114173606..114173612,+#_9b1a35c3254f8e0b9c27612eafcc0452 | p@chr11:114173606..114173612, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_9b1a35c3254f8e0b9c27612eafcc0452 | p8@TCF21 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:55459485..55459491,-#_9e08c230f4ef1bc6f190f29380dc41b1 | p6@C2orf63 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr15:39288691..39288698,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p@chr15:39288691..39288698, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr5:144875561..144875565,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p@chr5:144875561..144875565, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:137564648..137564658,-#_9e08c230f4ef1bc6f190f29380dc41b1 | p32@CREB3L2 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr3:46477553..46477563,-#_9e08c230f4ef1bc6f190f29380dc41b1 | p@chr3:46477553..46477563, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr19:54024454..54024463,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p31@ZNF331 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr15:39288691..39288698,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p@chr15:39288691..39288698, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr3:46477553..46477563,-#_9e08c230f4ef1bc6f190f29380dc41b1 | p@chr3:46477553..46477563, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr21:17214724..17214740,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p11@USP25 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr5:144875561..144875565,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p@chr5:144875561..144875565, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:137564648..137564658,-#_9e08c230f4ef1bc6f190f29380dc41b1 | p32@CREB3L2 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:55459485..55459491,-#_9e08c230f4ef1bc6f190f29380dc41b1 | p6@C2orf63 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr19:54024454..54024463,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p31@ZNF331 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr21:17214724..17214740,+#_9e08c230f4ef1bc6f190f29380dc41b1 | p11@USP25 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr14:64804787..64804796,-#_75cec8f13532dbd064f08f04d8a5152a | p10@ESR2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr15:39420650..39420666,+#_75cec8f13532dbd064f08f04d8a5152a | p@chr15:39420650..39420666, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:829412..829430,+#_75cec8f13532dbd064f08f04d8a5152a | p11@EFCAB4A |
| 3.99e-50 | FFCP PHASE2:Hg19::chr4:103969123..103969127,-#_75cec8f13532dbd064f08f04d8a5152a | p@chr4:103969123..103969127, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr4:103969123..103969127,-#_75cec8f13532dbd064f08f04d8a5152a | p@chr4:103969123..103969127, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:5198350..5198359,+#_75cec8f13532dbd064f08f04d8a5152a | p@chr12:5198350..5198359, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr14:64804787..64804796,-#_75cec8f13532dbd064f08f04d8a5152a | p10@ESR2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr15:39420650..39420666,+#_75cec8f13532dbd064f08f04d8a5152a | p@chr15:39420650..39420666, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:829412..829430,+#_75cec8f13532dbd064f08f04d8a5152a | p11@EFCAB4A |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:5198350..5198359,+#_75cec8f13532dbd064f08f04d8a5152a | p@chr12:5198350..5198359, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:92462738..92462749,-#_a74cb353c1ae0b31063f7e6e619ca130 | p51@CDK6 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr17:58165788..58165794,-#_a74cb353c1ae0b31063f7e6e619ca130 | p1@LOC645638 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:92462738..92462749,-#_a74cb353c1ae0b31063f7e6e619ca130 | p51@CDK6 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr16:1203194..1203207,+#_a74cb353c1ae0b31063f7e6e619ca130 | p3@CACNA1H |
| 6.58e-50 | FFCP PHASE1:Hg19::chr14:50697797..50697820,-#_a74cb353c1ae0b31063f7e6e619ca130 | p13@SOS2 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr17:58165788..58165794,-#_a74cb353c1ae0b31063f7e6e619ca130 | p1@LOC645638 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr14:50697797..50697820,-#_a74cb353c1ae0b31063f7e6e619ca130 | p13@SOS2 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr16:1203194..1203207,+#_a74cb353c1ae0b31063f7e6e619ca130 | p3@CACNA1H |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:194214959..194214968,-#_08bc211c76f5bf498967d83b19cde4d7 | p@chr3:194214959..194214968, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:194214959..194214968,-#_08bc211c76f5bf498967d83b19cde4d7 | p@chr3:194214959..194214968, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr11:77282391..77282402,+#_5f578c6d835d5b2bf75506d82088a9e4 | p@chr11:77282391..77282402, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr2:102604493..102604499,+#_5f578c6d835d5b2bf75506d82088a9e4 | p@chr2:102604493..102604499, + |
| 9.91e-41 | FFCP PHASE2:Hg19::chr11:94822746..94822757,+#_5f578c6d835d5b2bf75506d82088a9e4 | p8@ENDOD1 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr13:49549473..49549480,+#_5f578c6d835d5b2bf75506d82088a9e4 | p@chr13:49549473..49549480, + |
| 9.91e-41 | FFCP PHASE2:Hg19::chr8:125193673..125193689,-#_5f578c6d835d5b2bf75506d82088a9e4 | p@chr8:125193673..125193689, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr3:49139102..49139119,-#_5f578c6d835d5b2bf75506d82088a9e4 | p@chr3:49139102..49139119, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr11:110581726..110581728,-#_5f578c6d835d5b2bf75506d82088a9e4 | p@chr11:110581726..110581728, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr15:34522001..34522013,+#_5f578c6d835d5b2bf75506d82088a9e4 | p@chr15:34522001..34522013, + |
