CL:0002593: Difference between revisions
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|part_of= | |part_of=UBERON:0002456 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:04, 27 June 2012
| Name: | smooth muscle cell of the internal thoracic artery |
|---|---|
| Namespace: | cell |
| Definition: | "A smooth muscle of the internal thoracic artery." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:01:41Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002595(smooth muscle cell of the subclavian artery) |
|---|---|
| part_of: | UBERON:0002456(internal thoracic artery) |
Children
| derives from: | FF:0000173 (human smooth muscle cell of the internal thoracic artery sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
Mouse (Mus musculus)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002593 (smooth muscle cell of the internal thoracic artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.52e-50 | FFCP PHASE2:Hg19::chr1:156697077..156697084,-#_b207298ddc25bde5ddf3881d1137d742 | p11@ISG20L2 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr20:7755823..7755848,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr20:7755823..7755848, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:33798017..33798022,+#_b207298ddc25bde5ddf3881d1137d742 | p8@PRSS3 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr1:215257098..215257110,+#_b207298ddc25bde5ddf3881d1137d742 | p@chr1:215257098..215257110, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:168864427..168864464,-#_b207298ddc25bde5ddf3881d1137d742 | p19@MECOM |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:56507200..56507216,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr6:56507200..56507216, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:149900740..149900745,+#_b207298ddc25bde5ddf3881d1137d742 | p32@NDST1 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr16:73094120..73094122,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr16:73094120..73094122, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr1:156697077..156697084,-#_b207298ddc25bde5ddf3881d1137d742 | p11@ISG20L2 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr16:73094120..73094122,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr16:73094120..73094122, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr1:215257098..215257110,+#_b207298ddc25bde5ddf3881d1137d742 | p@chr1:215257098..215257110, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr17:40025761..40025768,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr17:40025761..40025768, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr20:7755823..7755848,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr20:7755823..7755848, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:33798017..33798022,+#_b207298ddc25bde5ddf3881d1137d742 | p8@PRSS3 |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:149900740..149900745,+#_b207298ddc25bde5ddf3881d1137d742 | p32@NDST1 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:168864427..168864464,-#_b207298ddc25bde5ddf3881d1137d742 | p19@MECOM |
| 4.52e-50 | FFCP PHASE1:Hg19::chr17:40025761..40025768,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr17:40025761..40025768, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:4822941..4822949,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr10:4822941..4822949, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:4822941..4822949,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr10:4822941..4822949, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:56507200..56507216,-#_b207298ddc25bde5ddf3881d1137d742 | p@chr6:56507200..56507216, - |
| 1.64e-40 | FFCP PHASE2:Hg19::chr7:93519591..93519595,-#_89492d4869d9e15512f5a09655254efc | p9@TFPI2 |
| 1.64e-40 | FFCP PHASE1:Hg19::chr7:93519591..93519595,-#_89492d4869d9e15512f5a09655254efc | p9@TFPI2 |
| 1.89e-37 | FFCP PHASE2:Hg19::chr2:161237614..161237627,-#_fd59677bb0d92656df19f7b9ecfb0964 | p@chr2:161237614..161237627, - |
| 1.89e-37 | FFCP PHASE1:Hg19::chr2:161237614..161237627,-#_fd59677bb0d92656df19f7b9ecfb0964 | p@chr2:161237614..161237627, - |
| 6.83e-37 | FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_df54ab5528a9082c1d1eae4f4619fac0 | p@chr9:3898804..3898817, - |
| 6.83e-37 | FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_df54ab5528a9082c1d1eae4f4619fac0 | p@chr9:3898804..3898817, - |
| 2.45e-36 | FFCP PHASE2:Hg19::chr9:3898831..3898843,-#_13d4882b9e48e516f8ce1e077909d6c7 | p@chr9:3898831..3898843, - |
| 2.45e-36 | FFCP PHASE1:Hg19::chr9:3898831..3898843,-#_13d4882b9e48e516f8ce1e077909d6c7 | p@chr9:3898831..3898843, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_3e3e97da9bd756977809ea517303e068 | p@chr3:156258392..156258395, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr17:75405541..75405547,-#_3e3e97da9bd756977809ea517303e068 | p@chr17:75405541..75405547, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr10:14457224..14457226,+#_3e3e97da9bd756977809ea517303e068 | p@chr10:14457224..14457226, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr10:14457224..14457226,+#_3e3e97da9bd756977809ea517303e068 | p@chr10:14457224..14457226, + |
| 3.61e-34 | FFCP PHASE1:Hg19::chr17:75405541..75405547,-#_3e3e97da9bd756977809ea517303e068 | p@chr17:75405541..75405547, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_3e3e97da9bd756977809ea517303e068 | p@chr3:156258392..156258395, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr4:120446538..120446544,-#_85084a1a6d3915200a090d1dcc3459d1 | p@chr4:120446538..120446544, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr11:6423953..6423960,-#_85084a1a6d3915200a090d1dcc3459d1 | p19@APBB1 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr11:6423953..6423960,-#_85084a1a6d3915200a090d1dcc3459d1 | p19@APBB1 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr4:120446538..120446544,-#_85084a1a6d3915200a090d1dcc3459d1 | p@chr4:120446538..120446544, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:29328382..29328391,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr11:29328382..29328391, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:205264274..205264298,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr1:205264274..205264298, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:29328382..29328391,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr11:29328382..29328391, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr14:24664018..24664052,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr14:24664018..24664052, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr12:88782727..88782732,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr12:88782727..88782732, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr13:33498605..33498607,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr13:33498605..33498607, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:25046857..25046871,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr1:25046857..25046871, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:134328418..134328421,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr7:134328418..134328421, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr13:61626552..61626556,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr13:61626552..61626556, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr13:61626552..61626556,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr13:61626552..61626556, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:33288524..33288536,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p19@DAXX |
| 7.05e-34 | FFCP PHASE1:Hg19::chr12:88782727..88782732,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr12:88782727..88782732, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr13:33498605..33498607,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr13:33498605..33498607, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:120285422..120285431,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p10@PHGDH |
| 7.05e-34 | FFCP PHASE2:Hg19::chr10:112206899..112206910,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr10:112206899..112206910, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr10:112206899..112206910,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr10:112206899..112206910, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:205264274..205264298,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr1:205264274..205264298, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:134328418..134328421,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr7:134328418..134328421, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:33288524..33288536,-#_54d9a8d5715ccb45794ad27ef4e89a61 | p19@DAXX |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:25046857..25046871,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr1:25046857..25046871, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:120285422..120285431,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p10@PHGDH |
| 7.05e-34 | FFCP PHASE2:Hg19::chr14:24664018..24664052,+#_54d9a8d5715ccb45794ad27ef4e89a61 | p@chr14:24664018..24664052, + |
| 1.64e-33 | FFCP PHASE2:Hg19::chr12:63025600..63025629,+#_4de15ef314cea32686648ab94c227651 | p@chr12:63025600..63025629, + |
| 1.64e-33 | FFCP PHASE1:Hg19::chr12:63025600..63025629,+#_4de15ef314cea32686648ab94c227651 | p@chr12:63025600..63025629, + |
| 3.59e-26 | FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_3b96e314b29aad03ed845cc0c84de43d | p@chr11:102668160..102668174, + |
| 3.59e-26 | FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_3b96e314b29aad03ed845cc0c84de43d | p@chr11:102668160..102668174, + |
| 4.08e-26 | FFCP PHASE1:Hg19::chr22:30639183..30639188,-#_38342a01ac8bc03543b251c2a9d5ba65 | p@chr22:30639183..30639188, - |
| 4.08e-26 | FFCP PHASE2:Hg19::chr22:30639183..30639188,-#_38342a01ac8bc03543b251c2a9d5ba65 | p@chr22:30639183..30639188, - |
| 4.32e-26 | FFCP PHASE2:Hg19::chr2:239336125..239336130,-#_448a9451fd0ae327aa58ae48c3495598 | p@chr2:239336125..239336130, - |
| 4.32e-26 | FFCP PHASE1:Hg19::chr2:239336125..239336130,-#_448a9451fd0ae327aa58ae48c3495598 | p@chr2:239336125..239336130, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr9:107754023..107754028,-#_5dd88b8391bd39f2588ba329944dab0d | p5@ENST00000457720 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr3:120188917..120188936,+#_5dd88b8391bd39f2588ba329944dab0d | p@chr3:120188917..120188936, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr19:10654854..10654878,+#_5dd88b8391bd39f2588ba329944dab0d | p3@ATG4D |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:220548381..220548386,+#_5dd88b8391bd39f2588ba329944dab0d | p@chr2:220548381..220548386, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr4:74765097..74765105,-#_5dd88b8391bd39f2588ba329944dab0d | p@chr4:74765097..74765105, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr3:5059566..5059575,-#_5dd88b8391bd39f2588ba329944dab0d | p@chr3:5059566..5059575, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr19:19626515..19626522,+#_5dd88b8391bd39f2588ba329944dab0d | p3@NDUFA13 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr19:18543503..18543510,+#_5dd88b8391bd39f2588ba329944dab0d | p@chr19:18543503..18543510, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr14:74417096..74417108,-#_5dd88b8391bd39f2588ba329944dab0d | p5@FAM161B |
| 9.18e-26 | FFCP PHASE1:Hg19::chr10:3207484..3207495,-#_5dd88b8391bd39f2588ba329944dab0d | p12@PITRM1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr10:3207484..3207495,-#_5dd88b8391bd39f2588ba329944dab0d | p12@PITRM1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr12:120907847..120907858,+#_5dd88b8391bd39f2588ba329944dab0d | p15@DYNLL1 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr12:120907847..120907858,+#_5dd88b8391bd39f2588ba329944dab0d | p15@DYNLL1 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr19:11018763..11018773,+#_5dd88b8391bd39f2588ba329944dab0d | p@chr19:11018763..11018773, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr7:4722287..4722294,+#_5dd88b8391bd39f2588ba329944dab0d | p9@FOXK1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:11325047..11325054,-#_5dd88b8391bd39f2588ba329944dab0d | p17@FAM167A |
| 9.18e-26 | FFCP PHASE2:Hg19::chr14:75083583..75083589,-#_5dd88b8391bd39f2588ba329944dab0d | p3@ENST00000555313 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr14:74417096..74417108,-#_5dd88b8391bd39f2588ba329944dab0d | p5@FAM161B |
| 9.18e-26 | FFCP PHASE1:Hg19::chr12:10856739..10856746,-#_5dd88b8391bd39f2588ba329944dab0d | p36@CSDA |
| 9.18e-26 | FFCP PHASE2:Hg19::chr12:10856739..10856746,-#_5dd88b8391bd39f2588ba329944dab0d | p36@CSDA |
| 9.18e-26 | FFCP PHASE2:Hg19::chr18:47087390..47087399,+#_5dd88b8391bd39f2588ba329944dab0d | p7@LIPG |
| 9.18e-26 | FFCP PHASE2:Hg19::chr9:107754023..107754028,-#_5dd88b8391bd39f2588ba329944dab0d | p5@ENST00000457720 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr3:5059566..5059575,-#_5dd88b8391bd39f2588ba329944dab0d | p@chr3:5059566..5059575, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr19:19626515..19626522,+#_5dd88b8391bd39f2588ba329944dab0d | p3@NDUFA13 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr14:89060786..89060796,+#_5dd88b8391bd39f2588ba329944dab0d | p11@ZC3H14 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr14:75083583..75083589,-#_5dd88b8391bd39f2588ba329944dab0d | p3@ENST00000555313 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr3:120188917..120188936,+#_5dd88b8391bd39f2588ba329944dab0d | p@chr3:120188917..120188936, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr19:10654854..10654878,+#_5dd88b8391bd39f2588ba329944dab0d | p3@ATG4D |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:220548381..220548386,+#_5dd88b8391bd39f2588ba329944dab0d | p@chr2:220548381..220548386, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr16:56458896..56458907,-#_5dd88b8391bd39f2588ba329944dab0d | p@chr16:56458896..56458907, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr12:77436888..77436903,-#_5dd88b8391bd39f2588ba329944dab0d | p@chr12:77436888..77436903, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr4:74765097..74765105,-#_5dd88b8391bd39f2588ba329944dab0d | p@chr4:74765097..74765105, - |
