FF:11278-116H9: Difference between revisions

Revision as of 17:10, 29 June 2012

Name:	Placental Epithelial Cells, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	placenta
dev stage	fetus
sex	unknown
age	NA
cell type	placental epithelial cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	2628
catalog number	CA230-R10f
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.22
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0972
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.318
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.637
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.176
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.762
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0664
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.666
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0722
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.115
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.694
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	1.174
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.674
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.103
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.264
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.115
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.345
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0782
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.115
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0.115
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.115
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11079

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.244
MA0003.1	MA0003.1	0.466
MA0004.1	MA0004.1	0.0523
MA0006.1	MA0006.1	0.118
MA0007.1	MA0007.1	0.0263
MA0009.1	MA0009.1	0.653
MA0014.1	MA0014.1	0.302
MA0017.1	MA0017.1	0.7
MA0018.2	MA0018.2	0.0103
MA0019.1	MA0019.1	0.00104
MA0024.1	MA0024.1	0.14
MA0025.1	MA0025.1	0.285
MA0027.1	MA0027.1	0.806
MA0028.1	MA0028.1	1.89992e-6
MA0029.1	MA0029.1	0.178
MA0030.1	MA0030.1	0.191
MA0031.1	MA0031.1	0.0786
MA0035.2	MA0035.2	0.0353
MA0038.1	MA0038.1	5.55625e-4
MA0039.2	MA0039.2	0.00494
MA0040.1	MA0040.1	0.921
MA0041.1	MA0041.1	0.405
MA0042.1	MA0042.1	0.716
MA0043.1	MA0043.1	0.747
MA0046.1	MA0046.1	0.326
MA0047.2	MA0047.2	0.813
MA0048.1	MA0048.1	0.536
MA0050.1	MA0050.1	4.24999e-10
MA0051.1	MA0051.1	6.39631e-6
MA0052.1	MA0052.1	0.329
MA0055.1	MA0055.1	2.80064e-5
MA0057.1	MA0057.1	0.77
MA0058.1	MA0058.1	0.0189
MA0059.1	MA0059.1	0.219
MA0060.1	MA0060.1	1.06498e-7
MA0061.1	MA0061.1	0.948
MA0062.2	MA0062.2	2.52653e-7
MA0065.2	MA0065.2	0.0698
MA0066.1	MA0066.1	0.206
MA0067.1	MA0067.1	0.727
MA0068.1	MA0068.1	0.875
MA0069.1	MA0069.1	0.918
MA0070.1	MA0070.1	0.0312
MA0071.1	MA0071.1	0.828
MA0072.1	MA0072.1	0.0675
MA0073.1	MA0073.1	0.697
MA0074.1	MA0074.1	0.481
MA0076.1	MA0076.1	1.15119e-7
MA0077.1	MA0077.1	0.92
MA0078.1	MA0078.1	0.782
MA0079.2	MA0079.2	0.32
MA0080.2	MA0080.2	3.63497e-8
MA0081.1	MA0081.1	0.272
MA0083.1	MA0083.1	0.595
MA0084.1	MA0084.1	0.383
MA0087.1	MA0087.1	0.724
MA0088.1	MA0088.1	0.17
MA0090.1	MA0090.1	0.00105
MA0091.1	MA0091.1	0.799
MA0092.1	MA0092.1	0.39
MA0093.1	MA0093.1	0.0589
MA0099.2	MA0099.2	2.21451e-10
MA0100.1	MA0100.1	0.284
MA0101.1	MA0101.1	0.285
MA0102.2	MA0102.2	0.00125
MA0103.1	MA0103.1	0.00143
MA0104.2	MA0104.2	0.702
MA0105.1	MA0105.1	0.773
MA0106.1	MA0106.1	0.0607
MA0107.1	MA0107.1	0.237
MA0108.2	MA0108.2	5.35537e-15
MA0111.1	MA0111.1	0.822
MA0112.2	MA0112.2	0.175
MA0113.1	MA0113.1	0.0254
MA0114.1	MA0114.1	0.285
MA0115.1	MA0115.1	0.621
MA0116.1	MA0116.1	0.641
MA0117.1	MA0117.1	0.654
MA0119.1	MA0119.1	0.787
MA0122.1	MA0122.1	0.592
MA0124.1	MA0124.1	0.143
MA0125.1	MA0125.1	0.0985
MA0131.1	MA0131.1	0.914
MA0135.1	MA0135.1	0.14
MA0136.1	MA0136.1	0.0452
MA0137.2	MA0137.2	0.513
MA0138.2	MA0138.2	0.603
MA0139.1	MA0139.1	0.983
MA0140.1	MA0140.1	0.835
MA0141.1	MA0141.1	0.395
MA0142.1	MA0142.1	0.902
MA0143.1	MA0143.1	0.26
MA0144.1	MA0144.1	0.963
MA0145.1	MA0145.1	0.215
MA0146.1	MA0146.1	0.0253
MA0147.1	MA0147.1	0.533
MA0148.1	MA0148.1	0.763
MA0149.1	MA0149.1	0.386
MA0150.1	MA0150.1	0.652
MA0152.1	MA0152.1	0.931
MA0153.1	MA0153.1	0.503
MA0154.1	MA0154.1	0.389
MA0155.1	MA0155.1	0.403
MA0156.1	MA0156.1	0.484
MA0157.1	MA0157.1	0.0472
MA0159.1	MA0159.1	0.171
MA0160.1	MA0160.1	0.179
MA0162.1	MA0162.1	0.0955
MA0163.1	MA0163.1	0.0946
MA0164.1	MA0164.1	0.295
MA0258.1	MA0258.1	0.64
MA0259.1	MA0259.1	0.697

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11079

Novel motif	Logo	P-value
1	1	0.828
10	10	0.886
100	100	0.145
101	101	0.0839
102	102	0.127
103	103	0.397
104	104	0.48
105	105	0.109
106	106	0.228
107	107	0.909
108	108	0.807
109	109	4.62919e-5
11	11	0.437
110	110	0.119
111	111	0.572
112	112	0.847
113	113	0.775
114	114	0.665
115	115	0.428
116	116	0.31
117	117	0.0501
118	118	0.13
119	119	0.396
12	12	0.465
120	120	0.128
121	121	0.158
122	122	0.00235
123	123	0.0128
124	124	0.21
125	125	0.68
126	126	0.445
127	127	0.756
128	128	0.552
129	129	0.292
13	13	0.00778
130	130	0.23
131	131	0.148
132	132	0.964
133	133	0.139
134	134	0.17
135	135	0.568
136	136	0.012
137	137	0.062
138	138	0.0962
139	139	0.565
14	14	0.892
140	140	0.912
141	141	0.506
142	142	0.162
143	143	0.818
144	144	0.967
145	145	0.877
146	146	0.26
147	147	0.709
148	148	0.00769
149	149	0.552
15	15	0.86
150	150	0.297
151	151	0.482
152	152	0.0315
153	153	0.0355
154	154	0.235
155	155	0.0655
156	156	0.0149
157	157	0.281
158	158	0.656
159	159	0.964
16	16	0.245
160	160	0.15
161	161	0.0679
162	162	0.901
163	163	0.767
164	164	0.312
165	165	0.702
166	166	0.114
167	167	0.432
168	168	0.963
169	169	0.0805
17	17	0.169
18	18	0.834
19	19	0.743
2	2	0.251
20	20	0.113
21	21	0.569
22	22	0.0774
23	23	0.198
24	24	0.264
25	25	0.736
26	26	0.272
27	27	0.405
28	28	0.94
29	29	0.0243
3	3	0.877
30	30	0.091
31	31	0.476
32	32	0.542
33	33	0.0857
34	34	0.849
35	35	0.16
36	36	0.448
37	37	0.128
38	38	0.463
39	39	0.242
4	4	0.511
40	40	6.82331e-4
41	41	0.769
42	42	0.943
43	43	0.738
44	44	0.97
45	45	0.141
46	46	0.897
47	47	0.542
48	48	0.218
49	49	0.893
5	5	0.415
50	50	0.365
51	51	0.561
52	52	0.72
53	53	0.27
54	54	0.961
55	55	0.49
56	56	0.723
57	57	0.625
58	58	0.575
59	59	0.133
6	6	0.898
60	60	0.699
61	61	0.389
62	62	0.299
63	63	0.824
64	64	0.406
65	65	0.644
66	66	0.0315
67	67	0.328
68	68	0.306
69	69	0.0073
7	7	0.244
70	70	0.79
71	71	0.64
72	72	0.533
73	73	0.0039
74	74	0.0241
75	75	0.0985
76	76	0.938
77	77	0.0634
78	78	0.117
79	79	0.853
8	8	0.974
80	80	0.819
81	81	0.123
82	82	0.857
83	83	0.826
84	84	0.366
85	85	0.997
86	86	0.884
87	87	0.017
88	88	0.372
89	89	0.0917
9	9	0.719
90	90	0.155
91	91	0.463
92	92	0.0896
93	93	0.987
94	94	0.993
95	95	0.00153
96	96	0.678
97	97	0.442
98	98	0.912
99	99	0.0946

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11079

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000136 human placental epithelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000349 (extraembryonic cell)
0000255 (eukaryotic cell)
0002577 (placental epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001987 (placenta)
0005795 (embryonic uterus)
0000995 (uterus)
0003134 (female reproductive organ)
0000926 (mesoderm)
0000479 (tissue)
0005156 (reproductive structure)
0000064 (organ part)
0000077 (mixed endoderm/mesoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0000990 (reproductive system)
0002050 (embryonic structure)
0004923 (organ component layer)
0005423 (developing anatomical structure)
0005631 (extraembryonic membrane)
0000467 (anatomical system)
0001062 (anatomical entity)
0000478 (extraembryonic structure)
0005291 (embryonic tissue)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0000925 (endoderm)
0006598 (presumptive structure)
0000158 (membranous layer)
0002532 (epiblast (generic))
0003124 (chorion)
0003100 (female organism)
0000474 (female reproductive system)
0003081 (lateral plate mesoderm)
0006595 (presumptive endoderm)
0006603 (presumptive mesoderm)
0004872 (splanchnic layer of lateral plate mesoderm)
0004340 (allantois)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
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 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr5:153857778..153857794,-!p1@HAND1!2.92!826.63!HAND1;;chr17:7493405..7493419,-!p1@SOX15!2.18!149.44!SOX15;;chr2:19558373..19558392,-!p1@OSR1!1.80!165.51!OSR1;;chr10:8096772..8096787,+!p2@GATA3!1.70!57.90!GATA3;;chr19:46806868..46806883,+!p3@HIF3A!1.69!47.59!HIF3A;;chr1:201979743..201979762,+!p1@ELF3!1.66!44.26!ELF3;;chr19:45579725..45579743,-!p1@ZNF296!1.65!188.55!ZNF296;;chr3:111314186..111314204,-!p1@ZBED2!1.64!42.74!ZBED2;;chr1:38512457..38512474,-!p1@POU3F1!1.63!45.47!POU3F1;;chr1:209979467..209979494,-!p1@IRF6!1.58!40.92!IRF6;;chr8:102504651..102504683,+!p1@GRHL2!1.51!31.22!GRHL2;;chr5:153857800..153857812,-!p2@HAND1!1.50!30.92!HAND1;;chr10:8096631..8096660,+!p1@GATA3!1.49!36.38!GATA3;;chr19:46801639..46801699,+!p1@HIF3A!1.47!28.49!HIF3A;;chr11:65554563..65554576,+!p2@OVOL1!1.44!26.68!OVOL1;;chr20:39317868..39317884,-!p1@MAFB!1.40!272.81!MAFB;;chr6:391743..391759,+!p1@IRF4!1.38!22.73!IRF4;;chr5:2751762..2751784,-!p1@IRX2!1.32!20.01!IRX2;;chr4:188916918..188916942,+!p1@ZFP42!1.30!18.79!ZFP42;;chr8:49833978..49833996,-!p1@SNAI2!1.25!335.26!SNAI2;;chr9:110252035..110252057,-!p1@KLF4!1.21!241.59!KLF4;;chr8:49833948..49833973,-!p2@SNAI2!1.21!95.49!SNAI2;;chr4:174451370..174451387,-!p1@HAND2!1.21!15.16!HAND2;;chr17:38256822..38256851,-!p1@NR1D1!1.20!116.10!NR1D1;;chr5:3595961..3595975,+!p3@IRX1!1.19!14.55!IRX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.18!17.88!TFAP2C;;chr16:31076332..31076388,-!p3@ZNF668!1.17!13.64!ZNF668;;chr16:67881588..67881612,-!p2@CENPT!1.16!18.49!CENPT;;chr6:10415276..10415341,-!p2@TFAP2A!1.15!16.07!TFAP2A;;chr5:3595934..3595957,+!p2@IRX1!1.14!12.73!IRX1;;chr4:174450089..174450153,-!p2@HAND2!1.14!12.73!HAND2;;chr10:8095593..8095625,+!p3@GATA3!1.12!14.25!GATA3;;chr11:65554528..65554546,+!p1@OVOL1!1.11!11.82!OVOL1;;chr5:3595977..3595999,+!p1@IRX1!1.11!11.82!IRX1;;chr8:102504979..102505010,+!p2@GRHL2!1.11!11.82!GRHL2;;chr17:45928521..45928539,-!p1@SP6!1.10!11.52!SP6;;chr20:18038521..18038571,-!p1@OVOL2!1.06!10.61!OVOL2;;chr8:102504690..102504704,+!p3@GRHL2!1.06!10.61!GRHL2;;chr18:77155922..77155939,+!p1@NFATC1!1.05!28.19!NFATC1;;chr3:111314230..111314241,-!p2@ZBED2!1.04!10.00!ZBED2;;chr5:174151553..174151610,+!p1@MSX2!1.03!16.37!MSX2;;chr1:935398..935465,-!p2@HES4!1.02!19.70!HES4;;chr6:85473156..85473210,-!p2@TBX18!1.02!11.52!TBX18;;chr19:17356189..17356221,-!p2@NR2F6!1.00!14.85!NR2F6;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.00!9.09!PEG3;;chr6:10412600..10412637,-!p1@TFAP2A!0.99!14.85!TFAP2A;;chr1:212782094..212782109,+!p1@ATF3!0.98!236.44!ATF3;;chr19:46800289..46800327,+!p2@HIF3A!0.98!8.49!HIF3A;;chr2:46524897..46524911,+!p2@EPAS1!0.97!23.95!EPAS1;;chr2:231084820..231084836,-!p5@SP110!0.97!9.70!SP110;;chr1:209979411..209979433,-!p2@IRF6!0.96!8.18!IRF6;;chr11:47236584..47236679,+!p1@DDB2!0.95!89.12!DDB2;;chr6:19837592..19837621,+!p1@ID4!0.95!50.02!ID4;;chr5:153857819..153857824,-!p3@HAND1!0.95!7.88!HAND1;;chr5:2751785..2751808,-!p2@IRX2!0.95!7.88!IRX2;;chr1:6479968..6479986,-!p1@HES2!0.95!7.88!HES2;;chr22:38598086..38598105,+!p1@MAFF!0.93!83.97!MAFF;;chr11:46299539..46299620,+!p2@CREB3L1!0.93!13.03!CREB3L1;;chr5:174151612..174151633,+!p2@MSX2!0.92!7.28!MSX2;;chr1:59249732..59249749,-!p2@JUN!0.90!88.21!JUN;;chr16:29818199..29818216,+!p11@MAZ!0.90!11.52!MAZ;;chr19:45971246..45971265,+!p1@FOSB!0.88!129.44!FOSB;;chr11:46722560..46722595,+!p1@ZNF408!0.88!36.38!ZNF408;;chr13:73633131..73633149,+!p1@KLF5!0.87!73.05!KLF5;;chr14:75988771..75988826,+!p1@BATF!0.87!8.79!BATF;;chr1:26496459..26496470,+!p2@ZNF593!0.86!12.43!ZNF593;;chr16:67867749..67867852,-!p1@CENPT!0.85!147.62!CENPT;;chr3:39195037..39195069,-!p2@CSRNP1!0.84!39.10!CSRNP1;;chr6:10413188..10413249,-!p7@TFAP2A!0.83!5.76!TFAP2A;;chrX:106960285..106960299,-!p1@TSC22D3!0.82!164.30!TSC22D3;;chr2:239148671..239148686,-!p1@HES6!0.79!20.61!HES6;;chr11:113930291..113930339,+!p2@ZBTB16!0.79!8.79!ZBTB16;;chr3:39195139..39195150,-!p3@CSRNP1!0.77!6.37!CSRNP1;;chr17:38256590..38256599,-!p8@NR1D1!0.77!4.85!NR1D1;;chr1:59249707..59249727,-!p1@JUN!0.75!218.55!JUN;;chr3:39195075..39195088,-!p1@CSRNP1!0.75!31.83!CSRNP1;;chr11:113930425..113930471,+!p1@ZBTB16!0.75!6.97!ZBTB16;;chr20:42295713..42295738,+!p2@MYBL2!0.74!29.71!MYBL2;;chr9:110250697..110250738,-!p2@KLF4!0.74!5.46!KLF4;;chrY:21906594..21906622,-!p1@KDM5D!0.74!4.55!KDM5D;;chr12:132628963..132629027,+!p1@NOC4L!0.73!70.93!NOC4L;;chr3:52001426..52001447,-!p3@PCBP4!0.73!13.34!PCBP4;;chrY:2803415..2803468,+!p1@ZFY!0.72!4.24!ZFY;;chr17:48072574..48072597,-!p1@DLX3!0.72!4.24!DLX3;;chr6:10415484..10415508,-!p3@TFAP2A!0.72!4.24!TFAP2A;;chr1:201979703..201979721,+!p2@ELF3!0.72!4.24!ELF3;;chr1:26496382..26496457,+!p1@ZNF593!0.71!283.12!ZNF593;;chr11:46299199..46299233,+!p1@CREB3L1!0.71!23.64!CREB3L1;;chr20:42295745..42295765,+!p1@MYBL2!0.69!72.45!MYBL2;;chr16:29818160..29818188,+!p6@MAZ!0.69!20.61!MAZ;;chr20:32274150..32274166,-!p2@E2F1!0.69!7.88!E2F1;;chr8:28243813..28243839,-!p4@ZNF395!0.69!7.58!ZNF395;;chr5:3596206..3596210,+!p4@IRX1!0.69!3.94!IRX1;;chr2:16080659..16080685,+!p1@MYCN!0.69!3.94!MYCN;;chr20:18038486..18038520,-!p2@OVOL2!0.69!3.94!OVOL2;;chr19:57946684..57946723,+!p1@ZNF749!0.68!48.20!ZNF749;;chr11:615942..615957,-!p1@IRF7!0.68!41.23!IRF7;;chr12:57914286..57914304,-!p1@DDIT3!0.67!155.81!DDIT3;;chr19:53289995..53290050,-!p1@ZNF600!0.67!16.98!ZNF600;;chr16:29818132..29818144,+!p12@MAZ!0.67!8.18!MAZ;;chr17:38256799..38256815,-!p3@NR1D1!0.67!7.28!NR1D1;;chr6:10412392..10412409,-!p4@TFAP2A!0.67!4.24!TFAP2A;;chr2:5832508..5832524,+!p1@SOX11!0.67!3.64!SOX11;;chr22:21356345..21356367,-!p3@THAP7!0.66!5.15!THAP7;;chr17:3571863..3571881,-!p1@TAX1BP3!0.65!288.58!TAX1BP3;;chr20:32274179..32274213,-!p1@E2F1!0.65!26.98!E2F1;;chr16:30537839..30537929,-!p1@ZNF768!0.65!25.16!ZNF768;;chr18:3452133..3452150,+!p19@TGIF1!0.65!3.94!TGIF1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.64!35.16!PPP1R13L;;chr1:161015676..161015694,-!p3@USF1!0.64!14.85!USF1;;chr17:45928443..45928473,-!p2@SP6!0.64!3.33!SP6;;chr4:299227..299272,-!p1@ZNF732!0.64!3.33!ZNF732;;chr19:42759266..42759290,-!p1@ERF!0.63!122.77!ERF;;chr3:52001448..52001478,-!p2@PCBP4!0.63!53.65!PCBP4;;chr19:42580274..42580375,+!p1@ZNF574!0.63!44.56!ZNF574;;chr22:21356378..21356422,-!p2@THAP7!0.63!34.25!THAP7;;chr19:1592714..1592762,-!p1@MBD3!0.63!28.80!MBD3;;chr3:128206762..128206781,-!p2@GATA2!0.63!23.64!GATA2;;chr9:35732561..35732587,+!p3@CREB3!0.63!16.07!CREB3;;chr6:12012536..12012554,+!p4@HIVEP1!0.63!8.79!HIVEP1;;chr8:23540441..23540466,-!p1@NKX3-1!0.63!7.28!NKX3-1;;chr7:148892653..148892729,+!p1@ZNF282!0.62!54.56!ZNF282;;chr9:35732592..35732640,+!p1@CREB3!0.62!49.41!CREB3;;chr18:3449720..3449749,+!p2@TGIF1!0.62!7.58!TGIF1;;chr20:2673383..2673441,+!p1@EBF4!0.62!5.46!EBF4;;chr11:65667846..65667868,-!p1@FOSL1!0.61!98.52!FOSL1;;chr19:56632858..56632903,-!p2@ZNF787!0.61!8.49!ZNF787;;chrX:107018969..107019024,-!p6@TSC22D3!0.61!4.55!TSC22D3;;chr19:46806885..46806888,+!p11@HIF3A!0.61!3.03!HIF3A;;chr16:67881647..67881663,-!p3@CENPT!0.61!3.03!CENPT;;chr10:8097321..8097348,+!p4@GATA3!0.61!3.03!GATA3;;chr7:101460882..101460923,+!p5@CUX1!0.61!3.03!CUX1;;chr19:56632592..56632670,-!p1@ZNF787!0.60!81.84!ZNF787;;chr22:38597987..38598021,+!p2@MAFF!0.59!21.52!MAFF;;chr8:145159324..145159333,+!p5@MAF1!0.59!6.67!MAF1;;chr16:29817789..29817838,+!p2@MAZ!0.58!46.98!MAZ;;chr6:33422343..33422394,+!p1@ZBTB9!0.58!23.04!ZBTB9;;chr10:77161533..77161546,-!p2@ZNF503!0.58!13.34!ZNF503;;chr9:35732514..35732530,+!p5@CREB3!0.58!4.24!CREB3;;chr9:110251836..110251887,-!p4@KLF4!0.58!3.94!KLF4;;chr5:16465902..16465917,-!p1@ZNF622!0.57!80.94!ZNF622;;chr19:50169013..50169062,-!p2@IRF3!0.57!19.10!IRF3;;chr6:85474299..85474324,-!p1@TBX18!0.57!5.46!TBX18;;chr6:31515311..31515330,+!p3@NFKBIL1!0.57!4.24!NFKBIL1;;chr19:58400344..58400364,-!p2@ZNF814!0.57!4.24!ZNF814;;chr6:10419768..10419819,-!p6@TFAP2A!0.57!2.73!TFAP2A;;chr8:55370487..55370503,+!p1@SOX17!0.57!2.73!SOX17;;chr11:125034640..125034655,+!p1@PKNOX2!0.57!2.73!PKNOX2;;chr16:67881534..67881549,-!p4@CENPT!0.57!2.73!CENPT;;chr1:149858461..149858479,+!p1@BOLA1!0.56!1309.21!BOLA1;;chr17:7492684..7492778,-!p2@SOX15!0.56!6.37!SOX15;;chr10:48355030..48355090,+!p1@ZNF488!0.56!3.64!ZNF488;;chr8:145669791..145669834,-!p1@TONSL!0.55!8.79!TONSL;;chr1:8939265..8939367,-!p5@ENO1!0.55!6.06!ENO1;;chr16:3185051..3185068,+!p3@ZNF213!0.55!4.55!ZNF213;;chr6:126240356..126240379,+!p7@NCOA7!0.55!3.33!NCOA7;;chr3:71631382..71631413,-!p20@FOXP1!0.55!3.03!FOXP1;;chrX:48900871..48900890,-!p1@TFE3!0.54!163.08!TFE3;;chr16:29817841..29817865,+!p1@MAZ!0.54!68.20!MAZ;;chr9:35732647..35732678,+!p2@CREB3!0.54!16.98!CREB3;;chr19:12175535..12175554,+!p1@ZNF844!0.54!16.67!ZNF844;;chr2:27357446..27357475,-!p2@PREB!0.54!10.31!PREB;;chr11:47270436..47270464,+!p2@NR1H3!0.54!6.06!NR1H3;;chr8:145159277..145159282,+!p7@MAF1!0.54!4.24!MAF1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.54!3.33!L3MBTL4;;chr17:46620898..46620927,-!p9@HOXB2!0.54!3.03!HOXB2;;chr11:65686952..65686975,+!p5@DRAP1!0.53!16.67!DRAP1;;chr12:72056773..72056796,+!p3@THAP2!0.53!3.33!THAP2;;chr8:28243785..28243799,-!p6@ZNF395!0.53!3.03!ZNF395;;chr6:10412576..10412599,-!p5@TFAP2A!0.53!2.43!TFAP2A;;chr6:28048343..28048354,+!p1@ZNF165!0.53!2.43!ZNF165;;chr7:1577899..1577943,+!p3@MAFK!0.53!2.43!MAFK;;chr18:76739816..76739822,+!p1@SALL3!0.53!2.43!SALL3;;chr2:122042770..122042785,-!p1@TFCP2L1!0.53!2.43!TFCP2L1;;chr10:135121763..135121783,+!p5@ZNF511!0.53!2.43!ZNF511;;chr14:37131058..37131139,+!p1@PAX9!0.53!2.43!PAX9;;chr7:4815238..4815327,+!p1@KIAA0415!0.52!66.38!AP5Z1;;chr19:59031131..59031193,-!p1@ZBTB45!0.52!39.41!ZBTB45;;chr8:145159357..145159373,+!p3@MAF1!0.52!37.59!MAF1;;chr17:61920280..61920343,-!p2@SMARCD2!0.52!29.10!SMARCD2;;chr9:130186653..130186734,+!p1@ZNF79!0.52!21.52!ZNF79;;chr1:204042233..204042249,+!p1@SOX13!0.52!18.49!SOX13;;chr14:69262789..69262822,-!p2@ZFP36L1!0.52!7.28!ZFP36L1;;chr16:3185024..3185045,+!p2@ZNF213!0.52!4.85!ZNF213;;chr19:50169064..50169121,-!p1@IRF3!0.51!41.53!IRF3;;chr22:30162924..30163005,-!p1@ZMAT5!0.51!36.07!ZMAT5;;chr6:44233252..44233296,-!p1@NFKBIE!0.51!28.80!NFKBIE;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chr19:37663572..37663630,-!p1@ZNF585A!0.15!14.25!ZNF585A;;chr6:33168126..33168180,-!p2@RXRB!0.15!12.73!RXRB;;chr1:41157266..41157314,+!p3@NFYC!0.15!10.00!NFYC;;chr19:55987963..55987996,+!p1@ZNF628!0.15!8.79!ZNF628;;chr3:44519131..44519186,-!p1@ZNF445!0.15!6.37!ZNF445;;chr19:57862622..57862686,+!p1@ZNF304!0.15!5.76!ZNF304;;chr19:56915668..56915732,+!p1@ZNF583!0.15!3.94!ZNF583;;chr12:3069037..3069119,+!p2@TEAD4!0.15!3.64!TEAD4;;chr1:8483756..8483809,-!p5@RERE!0.15!2.73!RERE;;chr1:91487836..91487854,-!p3@ZNF644!0.15!2.12!ZNF644;;chr19:55987998..55988026,+!p2@ZNF628!0.15!1.52!ZNF628;;chr1:23857698..23857733,-!p1@E2F2!0.15!1.52!E2F2;;chr1:247171347..247171366,-!p2@ZNF695!0.15!1.52!ZNF695;;chr19:57791876..57791892,+!p5@ZNF460!0.15!1.21!ZNF460;;chr1:151043070..151043110,+!p3@GABPB2!0.15!1.21!GABPB2;;chr21:36260295..36260310,-!p3@RUNX1!0.15!1.21!RUNX1;;chr17:42297092..42297112,-!p11@UBTF!0.15!1.21!UBTF;;chr12:50479101..50479108,+!p3@SMARCD1!0.15!1.21!SMARCD1;;chr19:50431999..50432026,+!p4@ATF5!0.15!0.91!ATF5;;chr3:14989024..14989041,+!p3@NR2C2!0.15!0.91!NR2C2;;chr3:170075124..170075136,+!p4@SKIL!0.15!0.91!SKIL;;chr8:135725369..135725388,-!p3@ZFAT!0.15!0.91!ZFAT;;chr15:71184837..71184877,-!p2@THAP10!0.15!0.91!THAP10;;chr17:41277479..41277510,-!p5@BRCA1!0.15!0.91!BRCA1;;chrX:131624056..131624069,-!p2@MBNL3!0.15!0.91!MBNL3;;chrX:84498989..84499003,+!p1@ZNF711!0.15!0.91!ZNF711;;chr22:21355865..21355886,-!p5@THAP7!0.15!0.61!THAP7;;chr2:27805971..27805981,+!p3@ZNF512!0.15!0.61!ZNF512;;chr13:73636516..73636532,+!p3@KLF5!0.15!0.61!KLF5;;chr1:78149157..78149168,-!p4@ZZZ3!0.15!0.61!ZZZ3;;chr17:38504601..38504634,+!p9@RARA!0.15!0.61!RARA;;chr6:126070769..126070801,+!p1@HEY2!0.15!0.61!HEY2;;chr16:3930681..3930721,-!p1@CREBBP!0.14!21.52!CREBBP;;chr6:32157947..32157992,-!p1@PBX2!0.14!20.61!PBX2;;chr16:67226019..67226127,+!p1@E2F4!0.14!15.76!E2F4;;chr17:7387524..7387597,-!p1@ZBTB4!0.14!11.22!ZBTB4;;chr7:6676943..6676984,+!p1@ENST00000427912!0.14!10.61!ZNF316;;chr6:41514305..41514359,+!p2@FOXP4!0.14!9.70!FOXP4;;chr20:48599506..48599526,+!p1@SNAI1!0.14!7.28!SNAI1;;chr11:123612319..123612395,-!p1@ZNF202!0.14!6.37!ZNF202;;chr21:43299404..43299463,-!p1@PRDM15!0.14!4.85!PRDM15;;chr19:2944907..2944981,-!p1@ZNF77!0.14!4.55!ZNF77;;chr3:44771092..44771160,+!p1@ZNF501!0.14!4.24!ZNF501;;chr16:2059754..2059777,-!p2@ZNF598!0.14!3.64!ZNF598;;chr19:12405645..12405685,-!p1@ZNF44!0.14!3.64!ZNF44;;chr19:58326246..58326262,-!p2@ZNF552!0.14!2.12!ZNF552;;chr4:121843844..121843904,-!p1@PRDM5!0.14!2.12!PRDM5;;chr7:129251614..129251630,+!p2@NRF1!0.14!2.12!NRF1;;chr16:31724618..31724630,+!p2@ZNF720!0.14!1.52!ZNF720;;chr19:57702832..57702844,+!p2@ZNF264!0.14!1.52!ZNF264;;chr20:48807615..48807644,+!p6@CEBPB!0.14!1.21!CEBPB;;chr14:64971014..64971044,+!p4@ZBTB1!0.14!1.21!ZBTB1;;chr15:96875657..96875760,+!p14@NR2F2!0.14!1.21!NR2F2;;chr18:42260059..42260132,+!p1@SETBP1!0.14!1.21!SETBP1;;chr3:71630690..71630750,-!p11@FOXP1!0.14!1.21!FOXP1;;chr19:52391220..52391251,-!p2@ZNF577!0.14!0.91!ZNF577;;chr8:145159846..145159889,+!p6@MAF1!0.14!0.91!MAF1;;chr14:35872926..35872951,-!p4@NFKBIA!0.14!0.91!NFKBIA;;chr11:19263160..19263176,-!p1@E2F8!0.14!0.61!E2F8;;chr11:65430535..65430549,-!p4@RELA!0.14!0.61!RELA;;chr7:99156011..99156036,+!p7@ZNF655!0.14!0.61!ZNF655;;chr17:38256695..38256706,-!p7@NR1D1!0.14!0.61!NR1D1;;chr11:65686855..65686946,+!p1@DRAP1!0.13!92.76!DRAP1;;chr9:130953817..130953876,-!p1@CIZ1!0.13!72.75!CIZ1;;chr8:102217817..102217936,-!p1@ZNF706!0.13!57.29!ZNF706;;chr17:7590797..7590815,-!p1@TP53!0.13!53.05!TP53;;chrX:53254373..53254406,-!p1@KDM5C!0.13!44.26!KDM5C;;chrX:47509928..47509990,-!p1@ELK1!0.13!36.68!ELK1;;chr19:6279932..6280000,-!p1@MLLT1!0.13!30.31!MLLT1;;chr17:42298201..42298284,-!p1@UBTF!0.13!19.40!UBTF;;chr12:108154891..108154923,-!p1@PRDM4!0.13!10.31!PRDM4;;chr12:48744642..48744733,-!p1@ZNF641!0.13!7.58!ZNF641;;

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FF:11278-116H9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:10, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0