FF:10408-106B3: Difference between revisions

Revision as of 18:51, 9 July 2012

Name:	lung adenocarcinoma cell line:PC-14
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	lung
dev stage	NA
sex	unknown
age	unknown
cell type	unclassifiable
cell line	PC-14
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.303
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.00236
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.123
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0913
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.15
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.57
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0935
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0258
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.221
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10726

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.751
MA0003.1	MA0003.1	0.723
MA0004.1	MA0004.1	0.644
MA0006.1	MA0006.1	0.0617
MA0007.1	MA0007.1	0.171
MA0009.1	MA0009.1	0.105
MA0014.1	MA0014.1	0.191
MA0017.1	MA0017.1	0.0828
MA0018.2	MA0018.2	0.01
MA0019.1	MA0019.1	0.84
MA0024.1	MA0024.1	0.0833
MA0025.1	MA0025.1	0.91
MA0027.1	MA0027.1	0.943
MA0028.1	MA0028.1	1.62918e-4
MA0029.1	MA0029.1	0.596
MA0030.1	MA0030.1	1.30441e-4
MA0031.1	MA0031.1	0.00476
MA0035.2	MA0035.2	0.0847
MA0038.1	MA0038.1	0.146
MA0039.2	MA0039.2	6.42551e-4
MA0040.1	MA0040.1	0.751
MA0041.1	MA0041.1	0.0282
MA0042.1	MA0042.1	0.437
MA0043.1	MA0043.1	0.342
MA0046.1	MA0046.1	0.119
MA0047.2	MA0047.2	0.00168
MA0048.1	MA0048.1	0.386
MA0050.1	MA0050.1	0.0322
MA0051.1	MA0051.1	0.327
MA0052.1	MA0052.1	0.0249
MA0055.1	MA0055.1	0.00203
MA0057.1	MA0057.1	0.339
MA0058.1	MA0058.1	0.507
MA0059.1	MA0059.1	0.0658
MA0060.1	MA0060.1	0.00212
MA0061.1	MA0061.1	0.00499
MA0062.2	MA0062.2	7.18284e-5
MA0065.2	MA0065.2	0.027
MA0066.1	MA0066.1	0.424
MA0067.1	MA0067.1	0.0135
MA0068.1	MA0068.1	0.324
MA0069.1	MA0069.1	0.56
MA0070.1	MA0070.1	0.294
MA0071.1	MA0071.1	0.77
MA0072.1	MA0072.1	0.509
MA0073.1	MA0073.1	0.606
MA0074.1	MA0074.1	0.789
MA0076.1	MA0076.1	4.14025e-5
MA0077.1	MA0077.1	0.0364
MA0078.1	MA0078.1	0.633
MA0079.2	MA0079.2	0.0793
MA0080.2	MA0080.2	0.118
MA0081.1	MA0081.1	0.0718
MA0083.1	MA0083.1	0.0024
MA0084.1	MA0084.1	0.353
MA0087.1	MA0087.1	0.375
MA0088.1	MA0088.1	0.729
MA0090.1	MA0090.1	0.0752
MA0091.1	MA0091.1	0.0797
MA0092.1	MA0092.1	0.514
MA0093.1	MA0093.1	0.712
MA0099.2	MA0099.2	1.60762e-4
MA0100.1	MA0100.1	0.599
MA0101.1	MA0101.1	0.0657
MA0102.2	MA0102.2	0.408
MA0103.1	MA0103.1	1.90872e-8
MA0104.2	MA0104.2	0.06
MA0105.1	MA0105.1	6.23632e-4
MA0106.1	MA0106.1	0.567
MA0107.1	MA0107.1	0.0581
MA0108.2	MA0108.2	0.00337
MA0111.1	MA0111.1	0.231
MA0112.2	MA0112.2	0.296
MA0113.1	MA0113.1	0.369
MA0114.1	MA0114.1	0.00692
MA0115.1	MA0115.1	0.166
MA0116.1	MA0116.1	0.0278
MA0117.1	MA0117.1	0.0241
MA0119.1	MA0119.1	0.959
MA0122.1	MA0122.1	0.236
MA0124.1	MA0124.1	0.46
MA0125.1	MA0125.1	0.363
MA0131.1	MA0131.1	0.648
MA0135.1	MA0135.1	0.165
MA0136.1	MA0136.1	0.431
MA0137.2	MA0137.2	0.138
MA0138.2	MA0138.2	0.8
MA0139.1	MA0139.1	0.176
MA0140.1	MA0140.1	0.33
MA0141.1	MA0141.1	0.569
MA0142.1	MA0142.1	0.223
MA0143.1	MA0143.1	0.303
MA0144.1	MA0144.1	0.104
MA0145.1	MA0145.1	0.0535
MA0146.1	MA0146.1	0.268
MA0147.1	MA0147.1	0.106
MA0148.1	MA0148.1	7.59018e-6
MA0149.1	MA0149.1	0.591
MA0150.1	MA0150.1	0.00158
MA0152.1	MA0152.1	0.184
MA0153.1	MA0153.1	0.245
MA0154.1	MA0154.1	0.248
MA0155.1	MA0155.1	0.908
MA0156.1	MA0156.1	0.0339
MA0157.1	MA0157.1	0.0494
MA0159.1	MA0159.1	0.327
MA0160.1	MA0160.1	0.101
MA0162.1	MA0162.1	0.838
MA0163.1	MA0163.1	0.0131
MA0164.1	MA0164.1	0.159
MA0258.1	MA0258.1	0.765
MA0259.1	MA0259.1	0.213

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10726

Novel motif	Logo	P-value
1	1	0.684
10	10	0.377
100	100	0.681
101	101	0.428
102	102	0.609
103	103	0.515
104	104	0.871
105	105	0.0426
106	106	0.00722
107	107	0.553
108	108	0.38
109	109	0.0375
11	11	0.392
110	110	0.981
111	111	0.615
112	112	0.242
113	113	0.235
114	114	0.393
115	115	0.356
116	116	0.0491
117	117	0.482
118	118	0.563
119	119	0.773
12	12	0.943
120	120	0.652
121	121	0.762
122	122	0.00687
123	123	0.379
124	124	0.6
125	125	0.126
126	126	0.493
127	127	0.971
128	128	0.161
129	129	0.0203
13	13	0.296
130	130	0.169
131	131	0.0521
132	132	0.566
133	133	0.0264
134	134	0.349
135	135	0.12
136	136	0.0184
137	137	0.256
138	138	0.957
139	139	0.464
14	14	0.844
140	140	0.611
141	141	0.809
142	142	0.946
143	143	0.0218
144	144	0.015
145	145	0.626
146	146	0.0918
147	147	0.251
148	148	0.33
149	149	0.478
15	15	0.413
150	150	0.906
151	151	0.868
152	152	0.54
153	153	0.177
154	154	0.0265
155	155	0.623
156	156	0.837
157	157	0.922
158	158	0.866
159	159	0.732
16	16	0.621
160	160	0.905
161	161	0.85
162	162	0.432
163	163	0.581
164	164	0.307
165	165	0.517
166	166	0.0352
167	167	0.333
168	168	0.772
169	169	0.274
17	17	0.434
18	18	0.0572
19	19	0.432
2	2	0.761
20	20	0.788
21	21	0.532
22	22	0.304
23	23	0.831
24	24	0.181
25	25	0.827
26	26	0.604
27	27	0.674
28	28	0.486
29	29	0.428
3	3	0.776
30	30	0.0656
31	31	0.676
32	32	0.00732
33	33	0.511
34	34	0.738
35	35	0.0204
36	36	0.787
37	37	0.122
38	38	0.393
39	39	0.582
4	4	0.786
40	40	0.31
41	41	0.0555
42	42	0.463
43	43	0.296
44	44	0.475
45	45	0.0354
46	46	0.514
47	47	0.865
48	48	0.776
49	49	0.152
5	5	0.895
50	50	0.416
51	51	0.96
52	52	0.83
53	53	0.89
54	54	0.624
55	55	0.923
56	56	0.38
57	57	0.795
58	58	0.793
59	59	0.789
6	6	0.25
60	60	0.457
61	61	0.132
62	62	0.423
63	63	0.59
64	64	0.916
65	65	0.905
66	66	0.0735
67	67	0.499
68	68	1.41171e-4
69	69	0.923
7	7	0.476
70	70	0.557
71	71	0.931
72	72	0.78
73	73	0.976
74	74	0.157
75	75	0.896
76	76	0.989
77	77	0.0857
78	78	0.455
79	79	0.00144
8	8	0.411
80	80	0.694
81	81	0.0712
82	82	0.00779
83	83	0.317
84	84	0.987
85	85	0.04
86	86	0.25
87	87	0.0915
88	88	0.58
89	89	0.991
9	9	0.994
90	90	0.757
91	91	0.843
92	92	0.1
93	93	0.97
94	94	0.295
95	95	0.971
96	96	0.28
97	97	0.0812
98	98	0.236
99	99	0.465

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10726

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102877 PC-14 cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
0050615 (respiratory system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1324 (lung cancer)
305 (carcinoma)
299 (adenocarcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004802 (respiratory tract epithelium)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0000115 (lung epithelium)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0100353 (lung cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0101911 (lung adenocarcinoma cell line sample)
0100762 (lung cancer cell line sample)
0102877 (PC-14 cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:1312325..1312340,+!p1@FOXQ1!2.22!261.49!FOXQ1;;chr11:34642612..34642646,+!p1@EHF!2.16!144.49!EHF;;chr1:201979743..201979762,+!p1@ELF3!2.03!107.13!ELF3;;chr17:7493405..7493419,-!p1@SOX15!2.03!106.43!SOX15;;chr17:7492684..7492778,-!p2@SOX15!1.91!164.22!SOX15;;chr10:8096772..8096787,+!p2@GATA3!1.76!66.25!GATA3;;chr14:75988771..75988826,+!p1@BATF!1.75!72.60!BATF;;chr8:10588010..10588030,-!p1@SOX7!1.71!50.04!SOX7;;chr1:201979703..201979721,+!p2@ELF3!1.64!42.29!ELF3;;chr10:8095593..8095625,+!p3@GATA3!1.61!46.52!GATA3;;chr6:28321971..28321995,-!p1@ZNF323!1.59!38.06!ZNF323;;chr19:58838369..58838439,+!p1@ZSCAN22!1.56!110.66!ZSCAN22;;chr11:34642656..34642667,+!p2@EHF!1.54!33.83!EHF;;chr8:102504651..102504683,+!p1@GRHL2!1.47!28.19!GRHL2;;chr1:209979467..209979494,-!p1@IRF6!1.44!29.60!IRF6;;chr7:27153454..27153469,-!p2@HOXA3!1.41!24.67!HOXA3;;chrX:30327504..30327509,-!p1@NR0B1!1.41!24.67!NR0B1;;chr12:26277956..26277980,-!p1@BHLHE41!1.39!82.46!BHLHE41;;chr3:12330560..12330579,+!p1@PPARG!1.39!26.78!PPARG;;chr11:34645791..34645836,+!p3@EHF!1.37!22.55!EHF;;chr17:41623692..41623715,-!p1@ETV4!1.35!88.81!ETV4;;chr6:10413188..10413249,-!p7@TFAP2A!1.33!20.44!TFAP2A;;chr17:41622765..41622821,-!p2@ETV4!1.31!29.60!ETV4;;chr13:73633131..73633149,+!p1@KLF5!1.29!193.12!KLF5;;chr20:55204351..55204377,+!p1@TFAP2C!1.29!23.26!TFAP2C;;chr3:169381420..169381535,-!p1@MECOM!1.28!21.14!MECOM;;chr11:65554528..65554546,+!p1@OVOL1!1.27!17.62!OVOL1;;chr6:10419768..10419819,-!p6@TFAP2A!1.27!17.62!TFAP2A;;chr6:28321909..28321965,-!p3@ZNF323!1.24!16.21!ZNF323;;chr12:26278008..26278024,-!p4@BHLHE41!1.23!19.03!BHLHE41;;chr14:38064429..38064486,-!p1@FOXA1!1.22!15.51!FOXA1;;chr2:238592039..238592054,+!p4@LRRFIP1!1.20!14.80!LRRFIP1;;chr6:10419824..10419840,-!p9@TFAP2A!1.20!14.80!TFAP2A;;chr17:41622731..41622764,-!p5@ETV4!1.16!13.39!ETV4;;chrX:131623044..131623089,-!p1@MBNL3!1.14!53.57!MBNL3;;chrX:56258844..56258882,+!p1@KLF8!1.14!17.62!KLF8;;chr17:45928521..45928539,-!p1@SP6!1.14!12.69!SP6;;chr17:41623667..41623682,-!p8@ETV4!1.11!12.69!ETV4;;chr10:8096631..8096660,+!p1@GATA3!1.10!14.10!GATA3;;chr19:45908292..45908374,-!p1@PPP1R13L!1.09!101.49!PPP1R13L;;chr17:41623009..41623053,-!p4@ETV4!1.09!18.33!ETV4;;chr12:26277994..26278001,-!p6@BHLHE41!1.09!11.28!BHLHE41;;chr2:19558373..19558392,-!p1@OSR1!1.07!29.60!OSR1;;chr10:48355030..48355090,+!p1@ZNF488!1.07!14.10!ZNF488;;chr15:96869511..96869525,+!p16@NR2F2!1.07!11.98!NR2F2;;chr17:46687959..46688007,-!p2@HOXB7!1.05!14.10!HOXB7;;chr17:46682321..46682362,-!p1@HOXB6!1.01!9.16!HOXB6;;chr6:34204672..34204692,+!p1@HMGA1!1.00!1025.51!HMGA1;;chr17:41623259..41623278,-!p7@ETV4!1.00!10.57!ETV4;;chr3:185826764..185826803,-!p2@ETV5!0.99!33.83!ETV5;;chr11:61520075..61520136,+!p1@C11orf9!0.99!19.03!C11orf9;;chr1:53019059..53019176,-!p2@ZCCHC11!0.98!77.53!ZCCHC11;;chr11:65554563..65554576,+!p2@OVOL1!0.98!8.46!OVOL1;;chr12:26278030..26278039,-!p7@BHLHE41!0.98!8.46!BHLHE41;;chr8:102504690..102504704,+!p3@GRHL2!0.98!8.46!GRHL2;;chr15:67418119..67418162,+!p5@SMAD3!0.96!9.16!SMAD3;;chr1:204042233..204042249,+!p1@SOX13!0.95!51.45!SOX13;;chr6:10415276..10415341,-!p2@TFAP2A!0.95!9.87!TFAP2A;;chr20:42543441..42543497,+!p1@TOX2!0.94!35.95!TOX2;;chr2:46524474..46524491,+!p4@EPAS1!0.94!19.03!EPAS1;;chr12:26277817..26277863,-!p2@BHLHE41!0.94!10.57!BHLHE41;;chr14:37131058..37131139,+!p1@PAX9!0.94!7.75!PAX9;;chr17:74137321..74137337,-!p1@FOXJ1!0.94!7.75!FOXJ1;;chr8:102504979..102505010,+!p2@GRHL2!0.94!7.75!GRHL2;;chr17:17740287..17740307,-!p1@SREBF1!0.93!205.81!SREBF1;;chr5:43120995..43121052,+!p1@ZNF131!0.93!39.47!ZNF131;;chr20:50159198..50159299,-!p1@NFATC2!0.91!10.57!NFATC2;;chr11:31832658..31832681,-!p1@PAX6!0.91!7.05!PAX6;;chr14:105935396..105935413,+!p4@MTA1!0.91!7.05!MTA1;;chr3:69915385..69915438,+!p3@MITF!0.91!7.05!MITF;;chr20:50721803..50721857,-!p2@ZFP64!0.90!11.28!ZFP64;;chr17:41622925..41622976,-!p3@ETV4!0.90!10.57!ETV4;;chr6:34204921..34204939,+!p3@HMGA1!0.88!211.44!HMGA1;;chr19:49864746..49864780,-!p2@TEAD2!0.88!9.16!TEAD2;;chr12:2986275..2986363,-!p1@FOXM1!0.87!67.66!FOXM1;;chr17:38465413..38465438,+!p5@RARA!0.87!10.57!RARA;;chr3:111314186..111314204,-!p1@ZBED2!0.87!6.34!ZBED2;;chr6:1312155..1312187,+!p2@FOXQ1!0.87!6.34!FOXQ1;;chrX:56258900..56258917,+!p4@KLF8!0.87!6.34!KLF8;;chr1:204042275..204042286,+!p4@SOX13!0.85!9.87!SOX13;;chr1:61548225..61548299,+!p1@NFIA!0.82!78.23!NFIA;;chr9:2158443..2158481,+!p2@SMARCA2!0.82!16.92!SMARCA2;;chr20:42543506..42543549,+!p2@TOX2!0.82!14.10!TOX2;;chr11:47279504..47279563,+!p1@NR1H3!0.82!13.39!NR1H3;;chr16:8962544..8962584,-!p2@CARHSP1!0.82!13.39!CARHSP1;;chr17:38465441..38465481,+!p6@RARA!0.82!7.05!RARA;;chr14:75988831..75988847,+!p2@BATF!0.82!5.64!BATF;;chr17:41623716..41623727,-!p12@ETV4!0.82!5.64!ETV4;;chr17:48045917..48045977,+!p1@DLX4!0.82!5.64!DLX4;;chr17:80797886..80797906,-!p1@ZNF750!0.82!5.64!ZNF750;;chr18:3412005..3412009,+!p49@TGIF1!0.82!5.64!TGIF1;;chr3:12329339..12329356,+!p5@PPARG!0.82!5.64!PPARG;;chr17:7590797..7590815,-!p1@TP53!0.81!257.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+|ffid_belonging_in_development=UBERON:0001041,UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316
 |fonse_cell_line=FF:0100353,FF:0101120
 |fonse_cell_line_closure=FF:0100353,FF:0101120

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FF:10408-106B3: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:51, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0