FFCP PHASE1:Hg19::chr9:16871087..16871103,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.75e-11!180;CL:0000710!1.09e-09!20;CL:0000188!3.49e-09!9;CL:0000148!3.92e-09!10;CL:0000541!3.92e-09!10;CL:0002322!6.26e-08!5;CL:0000075!3.12e-07!27 | |ontology_enrichment_celltype=CL:0000055!5.75e-11!180;CL:0000710!1.09e-09!20;CL:0000188!3.49e-09!9;CL:0000148!3.92e-09!10;CL:0000541!3.92e-09!10;CL:0002322!6.26e-08!5;CL:0000075!3.12e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002549;2.45e-12;2!CL:0000148;8.83e-10;10!CL:0002504;1.17e-08;3!CL:1000279;1.17e-08;3!CL:0002564;1.17e-08;3!CL:1000280;1.17e-08;3!CL:0000147;3.04e-07;14!CL:0000149;8.37e-07;4 | |ontology_enrichment_celltype_v019=CL:0002549;2.45e-12;2!CL:0000148;8.83e-10;10!CL:0002504;1.17e-08;3!CL:1000279;1.17e-08;3!CL:0002564;1.17e-08;3!CL:1000280;1.17e-08;3!CL:0000147;3.04e-07;14!CL:0000149;8.37e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,2.90e-12,2;CL:0000148,7.40e-10,10;CL:0000541,7.40e-10,10;CL:0002504,1.04e-08,3;CL:1000279,1.04e-08,3;CL:1000280,1.04e-08,3;CL:0002564,1.51e-08,3;CL:0000147,2.68e-07,14;CL:0000149,6.87e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;2.45e-12;2!DOID:4236;2.45e-12;2 | |ontology_enrichment_disease_v019=DOID:154;2.45e-12;2!DOID:4236;2.45e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:154,2.59e-12,2;DOID:4236,2.59e-12,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.45e-12;2!UBERON:0005358;2.45e-12;2!UBERON:0001886;2.45e-12;2!UBERON:0004086;2.45e-12;2!UBERON:0005282;2.45e-12;2!UBERON:0005281;2.45e-12;2!UBERON:0002242;1.17e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0005629;2.45e-12;2!UBERON:0005358;2.45e-12;2!UBERON:0001886;2.45e-12;2!UBERON:0004086;2.45e-12;2!UBERON:0005282;2.45e-12;2!UBERON:0005281;2.45e-12;2!UBERON:0002242;1.17e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.90e-12,2;UBERON:0005358,2.90e-12,2;UBERON:0001886,2.90e-12,2;UBERON:0004086,2.90e-12,2;UBERON:0005282,2.90e-12,2;UBERON:0005281,2.90e-12,2;UBERON:0002242,1.51e-08,3;UBERON:0003068,1.51e-08,3;UBERON:0002328,1.51e-08,3;UBERON:0004880,1.51e-08,3 | |||
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| ||
|short_description=p20@BNC2 | |short_description=p20@BNC2 | ||
}} | }} |
Revision as of 05:35, 17 November 2012
Short description: | p20@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -246bp_to_ENST00000486514_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 2.90e-12 | 2 |
melanocyte | 7.40e-10 | 10 |
melanoblast | 7.40e-10 | 10 |
enteric smooth muscle cell | 1.04e-08 | 3 |
smooth muscle cell of large intestine | 1.04e-08 | 3 |
smooth muscle cell of colon | 1.04e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 1.51e-08 | 3 |
pigment cell | 2.68e-07 | 14 |
visual pigment cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.90e-12 | 2 |
ventricle of nervous system | 2.90e-12 | 2 |
choroid plexus | 2.90e-12 | 2 |
brain ventricle | 2.90e-12 | 2 |
ventricular system of brain | 2.90e-12 | 2 |
ventricular system of central nervous system | 2.90e-12 | 2 |
nucleus pulposus | 1.51e-08 | 3 |
axial mesoderm | 1.51e-08 | 3 |
notochord | 1.51e-08 | 3 |
chordamesoderm | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.59e-12 | 2 |
carcinosarcoma | 2.59e-12 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.