FFCP PHASE1:Hg19::chr14:92403450..92403483,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.17e-28!180;CL:0000057!7.11e-27!75;CL:0002620!8.68e-13!23;CL:0000680!6.97e-11!57;CL:0000056!6.97e-11!57;CL:0000355!6.97e-11!57;CL:0000187!7.55e-10!54;CL:0002334!5.38e-09!12;CL:0000192!7.19e-09!42;CL:0000514!7.19e-09!42;CL:0000183!2.18e-08!59;CL:0000136!3.07e-08!15;CL:0000393!7.56e-08!60;CL:0000211!7.56e-08!60 | |ontology_enrichment_celltype=CL:0000055!6.17e-28!180;CL:0000057!7.11e-27!75;CL:0002620!8.68e-13!23;CL:0000680!6.97e-11!57;CL:0000056!6.97e-11!57;CL:0000355!6.97e-11!57;CL:0000187!7.55e-10!54;CL:0002334!5.38e-09!12;CL:0000192!7.19e-09!42;CL:0000514!7.19e-09!42;CL:0000183!2.18e-08!59;CL:0000136!3.07e-08!15;CL:0000393!7.56e-08!60;CL:0000211!7.56e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.89e-17;23!CL:0002334;1.43e-12;12!CL:0000057;4.08e-12;73!CL:0002551;8.34e-08;6!CL:0000136;2.58e-07;13 | |ontology_enrichment_celltype_v019=CL:0002620;6.89e-17;23!CL:0002334;1.43e-12;12!CL:0000057;4.08e-12;73!CL:0002551;8.34e-08;6!CL:0000136;2.58e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.72e-29,76;CL:0002620,4.76e-17,23;CL:0002334,7.32e-13,12;CL:0000048,3.61e-10,427;CL:0000723,1.39e-09,433;CL:0000136,5.50e-09,15;CL:0000034,7.71e-09,441;CL:0002551,6.63e-08,6;CL:0000680,2.63e-07,58;CL:0000056,2.63e-07,58;CL:0000355,2.63e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.45e-17!83;UBERON:0002329!3.45e-17!83;UBERON:0003077!3.45e-17!83;UBERON:0003059!3.45e-17!83;UBERON:0007282!3.45e-17!83;UBERON:0009618!3.45e-17!83;UBERON:0007285!3.45e-17!83;UBERON:0003102!5.73e-17!95;UBERON:0004290!7.89e-15!70;UBERON:0000475!1.80e-14!365;UBERON:0002199!1.95e-12!45;UBERON:0002416!1.95e-12!45;UBERON:0000486!1.65e-11!82;UBERON:0002385!1.96e-11!63;UBERON:0001015!1.96e-11!63;UBERON:0000383!1.96e-11!63;UBERON:0005256!3.28e-11!143;UBERON:0001134!3.70e-11!61;UBERON:0002036!3.70e-11!61;UBERON:0003082!3.70e-11!61;UBERON:0002100!3.59e-10!216;UBERON:0002097!4.10e-10!40;UBERON:0000468!4.50e-09!659;UBERON:0000481!1.19e-08!347;UBERON:0004923!2.10e-07!57;UBERON:0001013!2.74e-07!14;UBERON:0000479!3.92e-07!787;UBERON:0003104!4.48e-07!238;UBERON:0009142!4.48e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!3.45e-17!83;UBERON:0002329!3.45e-17!83;UBERON:0003077!3.45e-17!83;UBERON:0003059!3.45e-17!83;UBERON:0007282!3.45e-17!83;UBERON:0009618!3.45e-17!83;UBERON:0007285!3.45e-17!83;UBERON:0003102!5.73e-17!95;UBERON:0004290!7.89e-15!70;UBERON:0000475!1.80e-14!365;UBERON:0002199!1.95e-12!45;UBERON:0002416!1.95e-12!45;UBERON:0000486!1.65e-11!82;UBERON:0002385!1.96e-11!63;UBERON:0001015!1.96e-11!63;UBERON:0000383!1.96e-11!63;UBERON:0005256!3.28e-11!143;UBERON:0001134!3.70e-11!61;UBERON:0002036!3.70e-11!61;UBERON:0003082!3.70e-11!61;UBERON:0002100!3.59e-10!216;UBERON:0002097!4.10e-10!40;UBERON:0000468!4.50e-09!659;UBERON:0000481!1.19e-08!347;UBERON:0004923!2.10e-07!57;UBERON:0001013!2.74e-07!14;UBERON:0000479!3.92e-07!787;UBERON:0003104!4.48e-07!238;UBERON:0009142!4.48e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;4.84e-11;46!UBERON:0002416;4.84e-11;46!UBERON:0002097;1.79e-10;41!UBERON:0003102;1.98e-10;50!UBERON:0003688;4.78e-09;6!UBERON:0002358;4.78e-09;6!UBERON:0003684;4.78e-09;6!UBERON:0001178;4.78e-09;6!UBERON:0004457;8.23e-09;9!UBERON:0000042;8.23e-09;9!UBERON:0001013;1.92e-08;14!UBERON:0002067;5.03e-08;9!UBERON:0002384;2.19e-07;198 | |ontology_enrichment_uberon_v019=UBERON:0002199;4.84e-11;46!UBERON:0002416;4.84e-11;46!UBERON:0002097;1.79e-10;41!UBERON:0003102;1.98e-10;50!UBERON:0003688;4.78e-09;6!UBERON:0002358;4.78e-09;6!UBERON:0003684;4.78e-09;6!UBERON:0001178;4.78e-09;6!UBERON:0004457;8.23e-09;9!UBERON:0000042;8.23e-09;9!UBERON:0001013;1.92e-08;14!UBERON:0002067;5.03e-08;9!UBERON:0002384;2.19e-07;198 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.28e-19,99;UBERON:0002199,1.15e-17,46;UBERON:0002416,1.15e-17,46;UBERON:0002097,3.55e-14,41;UBERON:0007524,1.84e-12,73;UBERON:0002329,4.32e-12,71;UBERON:0003059,4.32e-12,71;UBERON:0007282,4.32e-12,71;UBERON:0004290,4.32e-12,71;UBERON:0009618,4.32e-12,71;UBERON:0003077,9.17e-12,72;UBERON:0007285,9.17e-12,72;UBERON:0005256,3.60e-11,122;UBERON:0004923,1.89e-10,66;UBERON:0000486,4.14e-10,83;UBERON:0007503,5.30e-10,78;UBERON:0002100,6.21e-10,199;UBERON:0003688,4.92e-09,6;UBERON:0002358,4.92e-09,6;UBERON:0003684,4.92e-09,6;UBERON:0001178,4.92e-09,6;UBERON:0004457,6.68e-09,12;UBERON:0000042,6.68e-09,12;UBERON:0001013,1.49e-08,14;UBERON:0003104,2.51e-08,160;UBERON:0009142,2.51e-08,160;UBERON:0002067,3.54e-08,9;UBERON:0004016,3.54e-08,9;UBERON:0010083,3.54e-08,9;UBERON:0001134,1.32e-07,62;UBERON:0002036,1.32e-07,62;UBERON:0003082,1.32e-07,62;UBERON:0002385,4.01e-07,64;UBERON:0001015,4.01e-07,64;UBERON:0000383,4.01e-07,64;UBERON:0000479,5.05e-07,773 | |||
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| ||
|short_description=p@chr14:92403450..92403483,- | |short_description=p@chr14:92403450..92403483,- | ||
}} | }} |
Revision as of 06:03, 17 November 2012
Short description: | p@chr14:92403450..92403483, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:92403450..92403483, - |
Coexpression cluster: | C470_Adipocyte_Preadipocyte_Smooth_Fibroblast_aorta_normal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.72e-29 | 76 |
skin fibroblast | 4.76e-17 | 23 |
preadipocyte | 7.32e-13 | 12 |
multi fate stem cell | 3.61e-10 | 427 |
somatic stem cell | 1.39e-09 | 433 |
fat cell | 5.50e-09 | 15 |
stem cell | 7.71e-09 | 441 |
fibroblast of dermis | 6.63e-08 | 6 |
muscle precursor cell | 2.63e-07 | 58 |
myoblast | 2.63e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.63e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.28e-19 | 99 |
integument | 1.15e-17 | 46 |
integumental system | 1.15e-17 | 46 |
skin of body | 3.55e-14 | 41 |
dense mesenchyme tissue | 1.84e-12 | 73 |
somite | 4.32e-12 | 71 |
presomitic mesoderm | 4.32e-12 | 71 |
presumptive segmental plate | 4.32e-12 | 71 |
dermomyotome | 4.32e-12 | 71 |
trunk paraxial mesoderm | 4.32e-12 | 71 |
paraxial mesoderm | 9.17e-12 | 72 |
presumptive paraxial mesoderm | 9.17e-12 | 72 |
trunk mesenchyme | 3.60e-11 | 122 |
organ component layer | 1.89e-10 | 66 |
multilaminar epithelium | 4.14e-10 | 83 |
epithelial vesicle | 5.30e-10 | 78 |
trunk | 6.21e-10 | 199 |
omentum | 4.92e-09 | 6 |
peritoneum | 4.92e-09 | 6 |
abdominal cavity | 4.92e-09 | 6 |
visceral peritoneum | 4.92e-09 | 6 |
cavity lining | 6.68e-09 | 12 |
serous membrane | 6.68e-09 | 12 |
adipose tissue | 1.49e-08 | 14 |
mesenchyme | 2.51e-08 | 160 |
entire embryonic mesenchyme | 2.51e-08 | 160 |
dermis | 3.54e-08 | 9 |
dermatome | 3.54e-08 | 9 |
future dermis | 3.54e-08 | 9 |
skeletal muscle tissue | 1.32e-07 | 62 |
striated muscle tissue | 1.32e-07 | 62 |
myotome | 1.32e-07 | 62 |
muscle tissue | 4.01e-07 | 64 |
musculature | 4.01e-07 | 64 |
musculature of body | 4.01e-07 | 64 |
tissue | 5.05e-07 | 773 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.