FFCP PHASE1:Hg19::chr2:51255204..51255216,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
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|ontology_enrichment_development_v019=UBERON:0007123;3.22e-09;5!CL:0000357;5.54e-08;6!CL:0000114;5.54e-08;6 | |ontology_enrichment_development_v019=UBERON:0007123;3.22e-09;5!CL:0000357;5.54e-08;6!CL:0000114;5.54e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.80e-11;4!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |ontology_enrichment_disease_v019=DOID:5409;2.80e-11;4!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,2.80e-11,4;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002046;3.22e-09;5!UBERON:0001871;6.04e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002046;3.22e-09;5!UBERON:0001871;6.04e-07;6 | ||
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|short_description=p36@NRXN1 | |short_description=p36@NRXN1 | ||
}} | }} |
Revision as of 14:29, 17 November 2012
Short description: | p36@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_36_at_NRXN1_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -285bp_to_ENST00000496792_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.11e-21 | 2 |
keratinocyte | 2.53e-09 | 5 |
stratified squamous epithelial cell | 5.54e-08 | 6 |
keratin accumulating cell | 5.54e-08 | 6 |
stratified epithelial cell | 5.54e-08 | 6 |
keratinizing barrier epithelial cell | 5.54e-08 | 6 |
epithelial fate stem cell | 5.54e-08 | 6 |
stratified epithelial stem cell | 5.54e-08 | 6 |
surface ectodermal cell | 5.54e-08 | 6 |
vein endothelial cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.22e-09 | 5 |
pharyngeal pouch | 3.22e-09 | 5 |
thyroid diverticulum | 3.22e-09 | 5 |
pharyngeal pouch 2 | 3.22e-09 | 5 |
thyroid primordium | 3.22e-09 | 5 |
temporal lobe | 6.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.80e-11 | 4 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.