FFCP PHASE1:Hg19::chr12:122216354..122216357,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000738!3.47e-08!140;CL:0000037!4.96e-08!172;CL:0000566!4.96e-08!172;CL:0000988!5.00e-08!182;CL:0002032!2.03e-07!165;CL:0000837!2.03e-07!165 | |ontology_enrichment_celltype=CL:0000738!3.47e-08!140;CL:0000037!4.96e-08!172;CL:0000566!4.96e-08!172;CL:0000988!5.00e-08!182;CL:0002032!2.03e-07!165;CL:0000837!2.03e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.16e-10;25!CL:0000791;3.35e-07;18!CL:0000789;3.35e-07;18!CL:0002419;3.35e-07;18 | |ontology_enrichment_celltype_v019=CL:0000084;9.16e-10;25!CL:0000791;3.35e-07;18!CL:0000789;3.35e-07;18!CL:0002419;3.35e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.41e-10,25;CL:0000827,6.41e-10,25;CL:0000838,1.23e-08,52;CL:0000542,1.93e-08,53;CL:0000051,1.93e-08,53;CL:0000791,2.30e-07,18;CL:0000789,2.30e-07,18;CL:0002420,2.30e-07,18;CL:0002419,2.30e-07,18;CL:0000790,2.30e-07,18;CL:0002127,6.80e-07,1;CL:0000914,6.80e-07,1;CL:0000911,6.80e-07,1;CL:0000814,6.80e-07,1;CL:0002042,6.80e-07,1;CL:0002039,6.80e-07,1;CL:0002040,6.80e-07,1;CL:0002041,6.80e-07,1;CL:0000319,7.60e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.35e-07;18 | |ontology_enrichment_development_v019=CL:0000790;3.35e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;4.08e-07;1!DOID:0060061;4.08e-07;1!DOID:8691;4.08e-07;1!DOID:3111;5.26e-07;1!DOID:3603;5.26e-07;1 | |ontology_enrichment_disease_v019=DOID:0060060;4.08e-07;1!DOID:0060061;4.08e-07;1!DOID:8691;4.08e-07;1!DOID:3111;5.26e-07;1!DOID:3603;5.26e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.09e-07,1;DOID:0060061,4.09e-07,1;DOID:8691,4.09e-07,1;DOID:3111,4.58e-07,1;DOID:3603,4.58e-07,1;DOID:3030,7.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.92e-09!9;UBERON:0001557!3.55e-08!19 | |ontology_enrichment_uberon=UBERON:0001737!2.92e-09!9;UBERON:0001557!3.55e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.59e-09;9!UBERON:0001557;1.59e-09;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.59e-09;9!UBERON:0001557;1.59e-09;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.56e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0.0764134057479513,0.410502947249729,0.314843125254717,0.786728553697808,0.383829398097213,0.928896739896456,0,0,0,0,0,0.293600439334847,0,0,1.95309783644267,0.671746422719773,0,0,0.145398238779565,0,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0.570025487482497,0.79566670879636,0,0,0,0,0.426730222566507,1.20118796110804,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0.526768169550154,1.57367816091066,0,0,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.886135578334485,0,1.28091319725675,1.04047478047903,0.493313713811028,0.552700035571697,0,0.444859689486181,0.267540828089713,0,0.679856056185397,0.383220493601921,0.34362744548263,0.253019692019503,1.27426165729639,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,1.64225599384209,0.80642697289893,0,2.46201486600758,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.664789802594326,1.19245312152671,0.571994910780128,0,0.596287222100115,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0.828147600278907,0.842923450390509,1.20505514941741,1.10293972732394,0.653638332277218,0.71181185733329,0.808987848960987,1.17732879075208,1.53898862778556,0,0,0,0,0,0,0,0,0.368965315629341,0.857839051492628,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0.246217006087397,0.468008530278475,1.0404181360211,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0.862510299438069,2.69520376187472,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0.524497659837696,0,0.231046011313244,0,0,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,1.66215201785745,0.223874754722178,0,0,1.02580050046556,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0,0,0,1.58625035258854,0.427296284509893,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.997896857164083,0.191505370132367,0,0.324621940274555,0,0.456469358066384,0.313359791546046,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0.36408156524854,0,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0.398495976502139,0,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0.511572370226872,0,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0,0,0,0.796554137998498,2.03402920234213,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.366390373607449,0,0,1.8837630767403,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0.104421949505455,0,0,0.234264445725339,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.730893170861856,1.39596276990456,0,0.0882561266915003,0,0.822251547880505,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,1.49103042678519,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0.229160424011684,0,0.599037001496973,0,0.446342914883745,0.0671834724867263,0,0,0.315132729228895,0.576911008668165,0.26961417541674,0,0.677386656526276,0,0,0.160753148465019,0.137539436597234,0,1.349843349309,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0,0.662091970365432,0.25426853765475,0,0,0,0,0.328370082997356,0,0,0,1.32506888912221,0.258565912723101,0,0.513260513652988,0,0.106787412567695,0,0,0.496166021811951,0.790446527591777,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.438568099157414,0,0.578742114812744,0.506827321959218,0,0,0,0,0,0.265729680626726,0.163565394255844,0,1.72041036127604,2.95836972702078,6.19960927150283,0,0,0,0,0.559518030877778,0,0,0,0,0,0.509197589862076,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.924205329202706,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0.354581522651905,0.111231401892069,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.098150233615243,0.243835849964539,0,0,0,0,0.467878926924211,0,0,0,0,0,0.694567422971502,0.874238242015829,0,0,0.235676547101626,0,0,0.4226557275834,0,0.0939839179798536,0,0.199882311849858,0,0,0.160482733378337,1.46067277649303,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.109265571963696,0.886889507080059,0.203977659483963,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,1.34558235096736,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.106727345877715,0,4.22178449900958,0,0,0,0,0,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0.0764134057479513,0.410502947249729,0.314843125254717,0.786728553697808,0.383829398097213,0.928896739896456,0,0,0,0,0,0.293600439334847,0,0,1.95309783644267,0.671746422719773,0,0,0.145398238779565,0,0,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0.570025487482497,0.79566670879636,0,0,0,0,0.426730222566507,1.20118796110804,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0.526768169550154,1.57367816091066,0,0,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.886135578334485,0,1.28091319725675,1.04047478047903,0.493313713811028,0.552700035571697,0,0.444859689486181,0.267540828089713,0,0.679856056185397,0.383220493601921,0.34362744548263,0.253019692019503,1.27426165729639,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,1.64225599384209,0.80642697289893,0,2.46201486600758,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.664789802594326,1.19245312152671,0.571994910780128,0,0.596287222100115,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0.828147600278907,0.842923450390509,1.20505514941741,1.10293972732394,0.653638332277218,0.71181185733329,0.808987848960987,1.17732879075208,1.53898862778556,0,0,0,0,0,0,0,0,0.368965315629341,0.857839051492628,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0.246217006087397,0.468008530278475,1.0404181360211,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0.862510299438069,2.69520376187472,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0.524497659837696,0,0.231046011313244,0,0,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,1.66215201785745,0.223874754722178,0,0,1.02580050046556,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0,0,0,1.58625035258854,0.427296284509893,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.997896857164083,0.191505370132367,0,0.324621940274555,0,0.456469358066384,0.313359791546046,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0.36408156524854,0,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0.398495976502139,0,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0.511572370226872,0,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0,0,0,0.796554137998498,2.03402920234213,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.366390373607449,0,0,1.8837630767403,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0.104421949505455,0,0,0.234264445725339,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.730893170861856,1.39596276990456,0,0.0882561266915003,0,0.822251547880505,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,1.49103042678519,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0.229160424011684,0,0.599037001496973,0,0.446342914883745,0.0671834724867263,0,0,0.315132729228895,0.576911008668165,0.26961417541674,0,0.677386656526276,0,0,0.160753148465019,0.137539436597234,0,1.349843349309,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0,0.662091970365432,0.25426853765475,0,0,0,0,0.328370082997356,0,0,0,1.32506888912221,0.258565912723101,0,0.513260513652988,0,0.106787412567695,0,0,0.496166021811951,0.790446527591777,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.438568099157414,0,0.578742114812744,0.506827321959218,0,0,0,0,0,0.265729680626726,0.163565394255844,0,1.72041036127604,2.95836972702078,6.19960927150283,0,0,0,0,0.559518030877778,0,0,0,0,0,0.509197589862076,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.924205329202706,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0.354581522651905,0.111231401892069,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.098150233615243,0.243835849964539,0,0,0,0,0.467878926924211,0,0,0,0,0,0.694567422971502,0.874238242015829,0,0,0.235676547101626,0,0,0.4226557275834,0,0.0939839179798536,0,0.199882311849858,0,0,0.160482733378337,1.46067277649303,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.109265571963696,0.886889507080059,0.203977659483963,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,1.34558235096736,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.106727345877715,0,4.22178449900958,0,0,0,0,0,1.28227396921293 | ||
|short_description=p@chr12:122216354..122216357,- | |short_description=p@chr12:122216354..122216357,- | ||
}} | }} |
Revision as of 22:48, 18 November 2012
Short description: | p@chr12:122216354..122216357, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:122216354..122216357, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.41e-10 | 25 |
pro-T cell | 6.41e-10 | 25 |
lymphoid lineage restricted progenitor cell | 1.23e-08 | 52 |
lymphocyte | 1.93e-08 | 53 |
common lymphoid progenitor | 1.93e-08 | 53 |
mature alpha-beta T cell | 2.30e-07 | 18 |
alpha-beta T cell | 2.30e-07 | 18 |
immature T cell | 2.30e-07 | 18 |
mature T cell | 2.30e-07 | 18 |
immature alpha-beta T cell | 2.30e-07 | 18 |
innate effector T cell | 6.80e-07 | 1 |
immature NK T cell | 6.80e-07 | 1 |
effector T cell | 6.80e-07 | 1 |
mature NK T cell | 6.80e-07 | 1 |
immature NK T cell stage IV | 6.80e-07 | 1 |
immature NK T cell stage I | 6.80e-07 | 1 |
immature NK T cell stage II | 6.80e-07 | 1 |
immature NK T cell stage III | 6.80e-07 | 1 |
mucus secreting cell | 7.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.56e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.09e-07 | 1 |
cutaneous T cell lymphoma | 4.09e-07 | 1 |
mycosis fungoides | 4.09e-07 | 1 |
cystadenocarcinoma | 4.58e-07 | 1 |
mucinous cystadenocarcinoma | 4.58e-07 | 1 |
mucinous adenocarcinoma | 7.60e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.