FFCP PHASE1:Hg19::chr15:45028719..45028738,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000542!2.20e-43!53;CL:0000051!2.20e-43!53;CL:0000838!1.41e-41!52;CL:0000945!5.71e-24!24;CL:0000826!5.71e-24!24;CL:0000738!2.05e-21!140;CL:0002087!3.77e-20!119;CL:0000791!1.67e-18!18;CL:0000789!1.67e-18!18;CL:0002420!1.67e-18!18;CL:0002419!1.67e-18!18;CL:0000790!1.67e-18!18;CL:0002031!8.30e-18!124;CL:0000084!1.07e-16!25;CL:0000827!1.07e-16!25;CL:0000625!1.88e-15!11;CL:0002032!2.21e-15!165;CL:0000837!2.21e-15!165;CL:0000037!3.87e-15!172;CL:0000566!3.87e-15!172;CL:0000988!1.19e-13!182;CL:0000236!3.97e-12!14;CL:0000453!2.71e-08!5 | |ontology_enrichment_celltype=CL:0000542!2.20e-43!53;CL:0000051!2.20e-43!53;CL:0000838!1.41e-41!52;CL:0000945!5.71e-24!24;CL:0000826!5.71e-24!24;CL:0000738!2.05e-21!140;CL:0002087!3.77e-20!119;CL:0000791!1.67e-18!18;CL:0000789!1.67e-18!18;CL:0002420!1.67e-18!18;CL:0002419!1.67e-18!18;CL:0000790!1.67e-18!18;CL:0002031!8.30e-18!124;CL:0000084!1.07e-16!25;CL:0000827!1.07e-16!25;CL:0000625!1.88e-15!11;CL:0002032!2.21e-15!165;CL:0000837!2.21e-15!165;CL:0000037!3.87e-15!172;CL:0000566!3.87e-15!172;CL:0000988!1.19e-13!182;CL:0000236!3.97e-12!14;CL:0000453!2.71e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.12e-23;5!CL:0000945;2.07e-14;24!CL:0000990;2.91e-13;8!CL:0000451;6.95e-11;10!CL:0000946;1.01e-08;1!CL:0000786;1.01e-08;1!CL:0000542;2.99e-07;53 | |ontology_enrichment_celltype_v019=CL:0000453;1.12e-23;5!CL:0000945;2.07e-14;24!CL:0000990;2.91e-13;8!CL:0000451;6.95e-11;10!CL:0000946;1.01e-08;1!CL:0000786;1.01e-08;1!CL:0000542;2.99e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.16e-23,5;CL:0000838,3.59e-15,52;CL:0000542,7.53e-15,53;CL:0000051,7.53e-15,53;CL:0000945,2.00e-14,24;CL:0000826,2.00e-14,24;CL:0000990,2.96e-13,8;CL:0000451,7.04e-11,10;CL:0000738,3.19e-09,136;CL:0000946,1.05e-08,1;CL:0000786,1.05e-08,1;CL:0000980,1.05e-08,1;CL:0002032,2.25e-07,161;CL:0000837,2.25e-07,161;CL:0000037,5.89e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.99e-07;53 | |ontology_enrichment_development_v019=CL:0000051;2.99e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;4.70e-09;1!DOID:0050177;4.70e-09;1!DOID:0050427;4.70e-09;1!DOID:4960;1.65e-08;1!DOID:0070004;1.65e-08;1 | |ontology_enrichment_disease_v019=DOID:630;4.70e-09;1!DOID:0050177;4.70e-09;1!DOID:0050427;4.70e-09;1!DOID:4960;1.65e-08;1!DOID:0070004;1.65e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,4.52e-09,1;DOID:0050177,4.52e-09,1;DOID:0050427,4.52e-09,1;DOID:4960,2.06e-08,1;DOID:0070004,2.06e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.472264687882075,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,2.98711155796555,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0,0.590129310341499,0,0.205601498999509,5.01559486172034,0.651844533267181,0.473447805734733,0,8.46719472327319,1.76763544484902,2.21533894583621,4.60366568400527,11.6563100950364,13.5261721462273,0.822189523018381,0.552700035571697,0.579606171470105,0,0,0,2.94604291013672,0,0.34362744548263,0.253019692019503,0.318565414324097,1.95325036156926,0.950452044448374,0.602300476311091,0.383959833463255,1.24930726552346,0.710331756132051,1.64225599384209,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57912944510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,34.8329999454827,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,18.5754933984068,5.9678373206639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,5.31459361253452,4.25270025065195,0,0,0,0.59996218756479,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41991373867136,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0.4226557275834,0,0.375935671919414,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7336094654718,30.5479108378043,0,0.20686599172379,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,11.8610342152196 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.472264687882075,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,2.98711155796555,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0,0.590129310341499,0,0.205601498999509,5.01559486172034,0.651844533267181,0.473447805734733,0,8.46719472327319,1.76763544484902,2.21533894583621,4.60366568400527,11.6563100950364,13.5261721462273,0.822189523018381,0.552700035571697,0.579606171470105,0,0,0,2.94604291013672,0,0.34362744548263,0.253019692019503,0.318565414324097,1.95325036156926,0.950452044448374,0.602300476311091,0.383959833463255,1.24930726552346,0.710331756132051,1.64225599384209,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57912944510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,34.8329999454827,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,18.5754933984068,5.9678373206639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,5.31459361253452,4.25270025065195,0,0,0,0.59996218756479,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41991373867136,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0.4226557275834,0,0.375935671919414,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7336094654718,30.5479108378043,0,0.20686599172379,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,11.8610342152196 | ||
|short_description=p6@TRIM69 | |short_description=p6@TRIM69 | ||
}} | }} |
Revision as of 00:47, 19 November 2012
Short description: | p6@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TRIM69_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | 0bp_to_ENST00000558329, ENST00000560442, ENST00000561043_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.16e-23 | 5 |
lymphoid lineage restricted progenitor cell | 3.59e-15 | 52 |
lymphocyte | 7.53e-15 | 53 |
common lymphoid progenitor | 7.53e-15 | 53 |
lymphocyte of B lineage | 2.00e-14 | 24 |
pro-B cell | 2.00e-14 | 24 |
conventional dendritic cell | 2.96e-13 | 8 |
dendritic cell | 7.04e-11 | 10 |
leukocyte | 3.19e-09 | 136 |
antibody secreting cell | 1.05e-08 | 1 |
plasma cell | 1.05e-08 | 1 |
plasmablast | 1.05e-08 | 1 |
hematopoietic oligopotent progenitor cell | 2.25e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-07 | 161 |
hematopoietic stem cell | 5.89e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.52e-09 | 1 |
monogenic disease | 4.52e-09 | 1 |
xeroderma pigmentosum | 4.52e-09 | 1 |
bone marrow cancer | 2.06e-08 | 1 |
myeloma | 2.06e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.