FFCP PHASE1:Hg19::chr17:59477275..59477286,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!4.58e-24!180;CL:0000183!9.60e-13!59;CL:0000680!3.30e-12!57;CL:0000056!3.30e-12!57;CL:0000355!3.30e-12!57;CL:0000187!9.91e-12!54;CL:0000192!1.10e-10!42;CL:0000514!1.10e-10!42;CL:0000057!9.52e-10!75;CL:0000393!2.68e-09!60;CL:0000211!2.68e-09!60;CL:0000075!6.12e-07!27 | |ontology_enrichment_celltype=CL:0000055!4.58e-24!180;CL:0000183!9.60e-13!59;CL:0000680!3.30e-12!57;CL:0000056!3.30e-12!57;CL:0000355!3.30e-12!57;CL:0000187!9.91e-12!54;CL:0000192!1.10e-10!42;CL:0000514!1.10e-10!42;CL:0000057!9.52e-10!75;CL:0000393!2.68e-09!60;CL:0000211!2.68e-09!60;CL:0000075!6.12e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.60e-08;43!CL:0000187;8.80e-08;55!CL:0000075;1.60e-07;27 | |ontology_enrichment_celltype_v019=CL:0000192;1.60e-08;43!CL:0000187;8.80e-08;55!CL:0000075;1.60e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.27e-13,58;CL:0000056,3.27e-13,58;CL:0000355,3.27e-13,58;CL:0000187,1.30e-12,55;CL:0000192,2.75e-12,43;CL:0000514,2.75e-12,43;CL:0000393,5.57e-10,61;CL:0000211,5.57e-10,61;CL:0000075,1.19e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000514;1.60e-08;43!CL:0000355;5.71e-08;58 | |ontology_enrichment_development_v019=CL:0000514;1.60e-08;43!CL:0000355;5.71e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.08e-19!365;UBERON:0000481!1.48e-18!347;UBERON:0000914!1.14e-14!83;UBERON:0002329!1.14e-14!83;UBERON:0003077!1.14e-14!83;UBERON:0003059!1.14e-14!83;UBERON:0007282!1.14e-14!83;UBERON:0009618!1.14e-14!83;UBERON:0007285!1.14e-14!83;UBERON:0002100!1.55e-14!216;UBERON:0005256!5.48e-14!143;UBERON:0004290!2.79e-13!70;UBERON:0002385!9.35e-13!63;UBERON:0001015!9.35e-13!63;UBERON:0000383!9.35e-13!63;UBERON:0001134!3.45e-12!61;UBERON:0002036!3.45e-12!61;UBERON:0003082!3.45e-12!61;UBERON:0003104!4.08e-11!238;UBERON:0009142!4.08e-11!238;UBERON:0000486!1.04e-09!82;UBERON:0000483!1.95e-09!309;UBERON:0000119!2.85e-09!312;UBERON:0000468!8.73e-09!659;UBERON:0007023!7.70e-07!115 | |ontology_enrichment_uberon=UBERON:0000475!1.08e-19!365;UBERON:0000481!1.48e-18!347;UBERON:0000914!1.14e-14!83;UBERON:0002329!1.14e-14!83;UBERON:0003077!1.14e-14!83;UBERON:0003059!1.14e-14!83;UBERON:0007282!1.14e-14!83;UBERON:0009618!1.14e-14!83;UBERON:0007285!1.14e-14!83;UBERON:0002100!1.55e-14!216;UBERON:0005256!5.48e-14!143;UBERON:0004290!2.79e-13!70;UBERON:0002385!9.35e-13!63;UBERON:0001015!9.35e-13!63;UBERON:0000383!9.35e-13!63;UBERON:0001134!3.45e-12!61;UBERON:0002036!3.45e-12!61;UBERON:0003082!3.45e-12!61;UBERON:0003104!4.08e-11!238;UBERON:0009142!4.08e-11!238;UBERON:0000486!1.04e-09!82;UBERON:0000483!1.95e-09!309;UBERON:0000119!2.85e-09!312;UBERON:0000468!8.73e-09!659;UBERON:0007023!7.70e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.39e-15,160;UBERON:0009142,1.39e-15,160;UBERON:0002329,1.10e-14,71;UBERON:0003059,1.10e-14,71;UBERON:0007282,1.10e-14,71;UBERON:0004290,1.10e-14,71;UBERON:0009618,1.10e-14,71;UBERON:0007524,1.16e-14,73;UBERON:0007503,2.10e-14,78;UBERON:0005256,2.65e-14,122;UBERON:0003077,3.18e-14,72;UBERON:0007285,3.18e-14,72;UBERON:0002385,4.02e-14,64;UBERON:0001015,4.02e-14,64;UBERON:0000383,4.02e-14,64;UBERON:0001134,1.97e-13,62;UBERON:0002036,1.97e-13,62;UBERON:0003082,1.97e-13,62;UBERON:0002100,7.17e-13,199;UBERON:0000486,1.44e-10,83;UBERON:0000490,2.97e-08,148 | |||
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| ||
|short_description=p3@TBX2 | |short_description=p3@TBX2 | ||
}} | }} |
Revision as of 02:52, 19 November 2012
Short description: | p3@TBX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TBX2_5end |
Coexpression cluster: | C2425_MCF7_Melanocyte_normal_Fibroblast_rhabdomyosarcoma_Smooth_lung |
Association with transcript: | 4bp_to_ENST00000419047_5end |
EntrezGene: | TBX2 |
HGNC: | 11597 |
UniProt: | F8WCM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.27e-13 | 58 |
myoblast | 3.27e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.27e-13 | 58 |
muscle cell | 1.30e-12 | 55 |
smooth muscle cell | 2.75e-12 | 43 |
smooth muscle myoblast | 2.75e-12 | 43 |
electrically responsive cell | 5.57e-10 | 61 |
electrically active cell | 5.57e-10 | 61 |
columnar/cuboidal epithelial cell | 1.19e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.39e-15 | 160 |
entire embryonic mesenchyme | 1.39e-15 | 160 |
somite | 1.10e-14 | 71 |
presomitic mesoderm | 1.10e-14 | 71 |
presumptive segmental plate | 1.10e-14 | 71 |
dermomyotome | 1.10e-14 | 71 |
trunk paraxial mesoderm | 1.10e-14 | 71 |
dense mesenchyme tissue | 1.16e-14 | 73 |
epithelial vesicle | 2.10e-14 | 78 |
trunk mesenchyme | 2.65e-14 | 122 |
paraxial mesoderm | 3.18e-14 | 72 |
presumptive paraxial mesoderm | 3.18e-14 | 72 |
muscle tissue | 4.02e-14 | 64 |
musculature | 4.02e-14 | 64 |
musculature of body | 4.02e-14 | 64 |
skeletal muscle tissue | 1.97e-13 | 62 |
striated muscle tissue | 1.97e-13 | 62 |
myotome | 1.97e-13 | 62 |
trunk | 7.17e-13 | 199 |
multilaminar epithelium | 1.44e-10 | 83 |
unilaminar epithelium | 2.97e-08 | 148 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.