FFCP PHASE1:Hg19::chr12:72666647..72666674,+: Difference between revisions
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|ontology_enrichment_celltype=CL:1000507!2.94e-07!12;CL:1000494!2.94e-07!12 | |ontology_enrichment_celltype=CL:1000507!2.94e-07!12;CL:1000494!2.94e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;8.65e-09;10!CL:1000494;8.65e-09;10 | |ontology_enrichment_celltype_v019=CL:1000507;8.65e-09;10!CL:1000494;8.65e-09;10 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.26e-08,10;CL:1000494,1.26e-08,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!8.45e-16!34;UBERON:0002346!9.34e-16!90;UBERON:0002020!1.98e-15!34;UBERON:0003528!1.98e-15!34;UBERON:0001869!3.71e-15!32;UBERON:0002791!5.82e-15!33;UBERON:0003075!4.16e-14!86;UBERON:0007284!4.16e-14!86;UBERON:0001049!1.13e-13!57;UBERON:0005068!1.13e-13!57;UBERON:0006241!1.13e-13!57;UBERON:0007135!1.13e-13!57;UBERON:0002780!1.48e-13!41;UBERON:0001890!1.48e-13!41;UBERON:0006240!1.48e-13!41;UBERON:0003056!2.65e-13!61;UBERON:0001950!2.82e-13!20;UBERON:0003080!5.37e-13!42;UBERON:0000956!7.89e-13!25;UBERON:0000203!7.89e-13!25;UBERON:0002616!8.58e-13!59;UBERON:0000475!8.76e-13!365;UBERON:0000073!9.92e-13!94;UBERON:0001016!9.92e-13!94;UBERON:0002619!1.27e-12!22;UBERON:0000955!1.49e-12!69;UBERON:0006238!1.49e-12!69;UBERON:0001017!4.00e-12!82;UBERON:0007023!4.41e-12!115;UBERON:0005743!1.78e-11!86;UBERON:0000033!6.95e-11!123;UBERON:0000153!9.73e-11!129;UBERON:0007811!9.73e-11!129;UBERON:0000924!1.19e-10!173;UBERON:0006601!1.19e-10!173;UBERON:0004121!1.77e-09!169;UBERON:0000064!1.15e-08!219;UBERON:0000481!1.72e-07!347;UBERON:0009773!2.94e-07!12;UBERON:0001231!2.94e-07!12;UBERON:0004810!2.94e-07!12;UBERON:0003887!5.04e-07!21 | |ontology_enrichment_uberon=UBERON:0001893!8.45e-16!34;UBERON:0002346!9.34e-16!90;UBERON:0002020!1.98e-15!34;UBERON:0003528!1.98e-15!34;UBERON:0001869!3.71e-15!32;UBERON:0002791!5.82e-15!33;UBERON:0003075!4.16e-14!86;UBERON:0007284!4.16e-14!86;UBERON:0001049!1.13e-13!57;UBERON:0005068!1.13e-13!57;UBERON:0006241!1.13e-13!57;UBERON:0007135!1.13e-13!57;UBERON:0002780!1.48e-13!41;UBERON:0001890!1.48e-13!41;UBERON:0006240!1.48e-13!41;UBERON:0003056!2.65e-13!61;UBERON:0001950!2.82e-13!20;UBERON:0003080!5.37e-13!42;UBERON:0000956!7.89e-13!25;UBERON:0000203!7.89e-13!25;UBERON:0002616!8.58e-13!59;UBERON:0000475!8.76e-13!365;UBERON:0000073!9.92e-13!94;UBERON:0001016!9.92e-13!94;UBERON:0002619!1.27e-12!22;UBERON:0000955!1.49e-12!69;UBERON:0006238!1.49e-12!69;UBERON:0001017!4.00e-12!82;UBERON:0007023!4.41e-12!115;UBERON:0005743!1.78e-11!86;UBERON:0000033!6.95e-11!123;UBERON:0000153!9.73e-11!129;UBERON:0007811!9.73e-11!129;UBERON:0000924!1.19e-10!173;UBERON:0006601!1.19e-10!173;UBERON:0004121!1.77e-09!169;UBERON:0000064!1.15e-08!219;UBERON:0000481!1.72e-07!347;UBERON:0009773!2.94e-07!12;UBERON:0001231!2.94e-07!12;UBERON:0004810!2.94e-07!12;UBERON:0003887!5.04e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.45e-25;20!UBERON:0002619;2.38e-22;22!UBERON:0000956;2.55e-19;25!UBERON:0000203;2.55e-19;25!UBERON:0001869;1.46e-15;32!UBERON:0001893;4.34e-14;34!UBERON:0002791;5.07e-13;32!UBERON:0003528;1.16e-11;34!UBERON:0002020;1.16e-11;34!UBERON:0000200;9.77e-11;6!UBERON:0004211;8.65e-09;10!UBERON:0009773;8.65e-09;10!UBERON:0001231;8.65e-09;10!UBERON:0004810;8.65e-09;10!UBERON:0001872;1.27e-08;5!UBERON:0002021;1.27e-08;5!UBERON:0002780;1.47e-08;41!UBERON:0001890;1.47e-08;41!UBERON:0001870;3.25e-08;3!UBERON:0002346;4.99e-07;4!UBERON:0000923;4.99e-07;4!UBERON:0010316;4.99e-07;4!UBERON:0005291;4.99e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001950;7.45e-25;20!UBERON:0002619;2.38e-22;22!UBERON:0000956;2.55e-19;25!UBERON:0000203;2.55e-19;25!UBERON:0001869;1.46e-15;32!UBERON:0001893;4.34e-14;34!UBERON:0002791;5.07e-13;32!UBERON:0003528;1.16e-11;34!UBERON:0002020;1.16e-11;34!UBERON:0000200;9.77e-11;6!UBERON:0004211;8.65e-09;10!UBERON:0009773;8.65e-09;10!UBERON:0001231;8.65e-09;10!UBERON:0004810;8.65e-09;10!UBERON:0001872;1.27e-08;5!UBERON:0002021;1.27e-08;5!UBERON:0002780;1.47e-08;41!UBERON:0001890;1.47e-08;41!UBERON:0001870;3.25e-08;3!UBERON:0002346;4.99e-07;4!UBERON:0000923;4.99e-07;4!UBERON:0010316;4.99e-07;4!UBERON:0005291;4.99e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.06e-25,20;UBERON:0002619,1.06e-22,22;UBERON:0000956,1.26e-19,25;UBERON:0000203,1.26e-19,25;UBERON:0001869,7.49e-17,32;UBERON:0001893,1.19e-15,34;UBERON:0002791,1.21e-14,32;UBERON:0003528,1.37e-13,34;UBERON:0002020,1.37e-13,34;UBERON:0002780,2.30e-12,41;UBERON:0001890,2.30e-12,41;UBERON:0003080,2.30e-12,41;UBERON:0006240,2.30e-12,41;UBERON:0002346,2.92e-11,86;UBERON:0000200,4.01e-11,6;UBERON:0003056,1.44e-10,61;UBERON:0000073,4.93e-10,53;UBERON:0002616,4.93e-10,53;UBERON:0001049,2.73e-09,56;UBERON:0005068,2.73e-09,56;UBERON:0006241,2.73e-09,56;UBERON:0007135,2.73e-09,56;UBERON:0001872,1.11e-08,5;UBERON:0002021,1.11e-08,5;UBERON:0004810,1.26e-08,10;UBERON:0001870,1.28e-08,3;UBERON:0003075,1.40e-08,82;UBERON:0007284,1.40e-08,82;UBERON:0001016,3.05e-08,89;UBERON:0000955,7.40e-08,68;UBERON:0006238,7.40e-08,68;UBERON:0001017,7.34e-07,81 | |||
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| ||
|short_description=p4@TRHDE | |short_description=p4@TRHDE | ||
}} | }} |
Revision as of 08:52, 19 November 2012
Short description: | p4@TRHDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TRHDE_5end |
Coexpression cluster: | C1686_anaplastic_clear_gastrointestinal_carcinoid_acute_occipital_neuroectodermal |
Association with transcript: | 111bp_to_AY358765_5end |
EntrezGene: | TRHDE |
HGNC: | 30748 |
UniProt: | Q9UKU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.26e-08 | 10 |
nephron tubule epithelial cell | 1.26e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.06e-25 | 20 |
regional part of cerebral cortex | 1.06e-22 | 22 |
cerebral cortex | 1.26e-19 | 25 |
pallium | 1.26e-19 | 25 |
cerebral hemisphere | 7.49e-17 | 32 |
telencephalon | 1.19e-15 | 34 |
regional part of telencephalon | 1.21e-14 | 32 |
brain grey matter | 1.37e-13 | 34 |
gray matter | 1.37e-13 | 34 |
regional part of forebrain | 2.30e-12 | 41 |
forebrain | 2.30e-12 | 41 |
anterior neural tube | 2.30e-12 | 41 |
future forebrain | 2.30e-12 | 41 |
neurectoderm | 2.92e-11 | 86 |
gyrus | 4.01e-11 | 6 |
pre-chordal neural plate | 1.44e-10 | 61 |
regional part of nervous system | 4.93e-10 | 53 |
regional part of brain | 4.93e-10 | 53 |
neural tube | 2.73e-09 | 56 |
neural rod | 2.73e-09 | 56 |
future spinal cord | 2.73e-09 | 56 |
neural keel | 2.73e-09 | 56 |
parietal lobe | 1.11e-08 | 5 |
occipital lobe | 1.11e-08 | 5 |
nephron tubule epithelium | 1.26e-08 | 10 |
frontal cortex | 1.28e-08 | 3 |
neural plate | 1.40e-08 | 82 |
presumptive neural plate | 1.40e-08 | 82 |
nervous system | 3.05e-08 | 89 |
brain | 7.40e-08 | 68 |
future brain | 7.40e-08 | 68 |
central nervous system | 7.34e-07 | 81 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.