FFCP PHASE1:Hg19::chr8:97597117..97597144,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.91e-32!180;CL:0000057!8.56e-22!75;CL:0002620!8.33e-18!23;CL:0000048!2.07e-16!430;CL:0000723!4.11e-16!436;CL:0000034!3.92e-15!444;CL:0000187!6.29e-13!54;CL:0000680!8.40e-13!57;CL:0000056!8.40e-13!57;CL:0000355!8.40e-13!57;CL:0000393!1.56e-12!60;CL:0000211!1.56e-12!60;CL:0000183!7.39e-12!59;CL:0000359!2.53e-09!32;CL:0002371!5.38e-09!591;CL:0000192!5.40e-09!42;CL:0000514!5.40e-09!42;CL:0002320!5.20e-08!365;CL:0000144!1.73e-07!625;CL:0002334!1.94e-07!12;CL:0000134!3.30e-07!358 | |ontology_enrichment_celltype=CL:0000055!3.91e-32!180;CL:0000057!8.56e-22!75;CL:0002620!8.33e-18!23;CL:0000048!2.07e-16!430;CL:0000723!4.11e-16!436;CL:0000034!3.92e-15!444;CL:0000187!6.29e-13!54;CL:0000680!8.40e-13!57;CL:0000056!8.40e-13!57;CL:0000355!8.40e-13!57;CL:0000393!1.56e-12!60;CL:0000211!1.56e-12!60;CL:0000183!7.39e-12!59;CL:0000359!2.53e-09!32;CL:0002371!5.38e-09!591;CL:0000192!5.40e-09!42;CL:0000514!5.40e-09!42;CL:0002320!5.20e-08!365;CL:0000144!1.73e-07!625;CL:0002334!1.94e-07!12;CL:0000134!3.30e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.92e-20;23!CL:0002594;7.05e-15;4!CL:0000057;5.50e-08;73!CL:0000359;5.79e-07;32 | |ontology_enrichment_celltype_v019=CL:0002620;3.92e-20;23!CL:0002594;7.05e-15;4!CL:0000057;5.50e-08;73!CL:0000359;5.79e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.02e-20,23;CL:0002594,2.18e-15,4;CL:0000057,1.74e-13,76;CL:0000048,1.93e-10,427;CL:0000723,3.85e-10,433;CL:0000034,9.40e-10,441;CL:0000359,2.33e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.38e-09!14;DOID:17!5.09e-07!5;DOID:450!5.09e-07!5;DOID:66!5.09e-07!5;DOID:423!5.09e-07!5;DOID:0080000!5.09e-07!5;DOID:11722!5.09e-07!5 | |ontology_enrichment_disease=DOID:2394!2.38e-09!14;DOID:17!5.09e-07!5;DOID:450!5.09e-07!5;DOID:66!5.09e-07!5;DOID:423!5.09e-07!5;DOID:0080000!5.09e-07!5;DOID:11722!5.09e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.19e-11;14!DOID:17;3.55e-07;5!DOID:450;3.55e-07;5!DOID:66;3.55e-07;5!DOID:423;3.55e-07;5!DOID:0080000;3.55e-07;5!DOID:11722;3.55e-07;5 | |ontology_enrichment_disease_v019=DOID:2394;1.19e-11;14!DOID:17;3.55e-07;5!DOID:450;3.55e-07;5!DOID:66;3.55e-07;5!DOID:423;3.55e-07;5!DOID:0080000;3.55e-07;5!DOID:11722;3.55e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.63e-12,14;DOID:17,4.45e-07,5;DOID:450,4.45e-07,5;DOID:66,4.45e-07,5;DOID:423,4.45e-07,5;DOID:0080000,4.45e-07,5;DOID:11722,4.45e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.67e-16!83;UBERON:0002329!2.67e-16!83;UBERON:0003077!2.67e-16!83;UBERON:0003059!2.67e-16!83;UBERON:0007282!2.67e-16!83;UBERON:0009618!2.67e-16!83;UBERON:0007285!2.67e-16!83;UBERON:0004290!2.07e-13!70;UBERON:0001134!2.63e-11!61;UBERON:0002036!2.63e-11!61;UBERON:0003082!2.63e-11!61;UBERON:0002097!7.26e-11!40;UBERON:0002199!7.49e-11!45;UBERON:0002416!7.49e-11!45;UBERON:0002385!1.23e-10!63;UBERON:0001015!1.23e-10!63;UBERON:0000383!1.23e-10!63;UBERON:0000486!8.48e-10!82;UBERON:0002384!3.26e-09!375;UBERON:0005256!1.03e-07!143;UBERON:0003102!3.56e-07!95 | |ontology_enrichment_uberon=UBERON:0000914!2.67e-16!83;UBERON:0002329!2.67e-16!83;UBERON:0003077!2.67e-16!83;UBERON:0003059!2.67e-16!83;UBERON:0007282!2.67e-16!83;UBERON:0009618!2.67e-16!83;UBERON:0007285!2.67e-16!83;UBERON:0004290!2.07e-13!70;UBERON:0001134!2.63e-11!61;UBERON:0002036!2.63e-11!61;UBERON:0003082!2.63e-11!61;UBERON:0002097!7.26e-11!40;UBERON:0002199!7.49e-11!45;UBERON:0002416!7.49e-11!45;UBERON:0002385!1.23e-10!63;UBERON:0001015!1.23e-10!63;UBERON:0000383!1.23e-10!63;UBERON:0000486!8.48e-10!82;UBERON:0002384!3.26e-09!375;UBERON:0005256!1.03e-07!143;UBERON:0003102!3.56e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;7.05e-15;4!UBERON:0002118;3.29e-12;5!UBERON:0002097;6.67e-10;41!UBERON:0000992;1.85e-09;13!UBERON:0002199;4.05e-09;46!UBERON:0002416;4.05e-09;46!UBERON:0003102;9.00e-08;50 | |ontology_enrichment_uberon_v019=UBERON:0001310;7.05e-15;4!UBERON:0002118;3.29e-12;5!UBERON:0002097;6.67e-10;41!UBERON:0000992;1.85e-09;13!UBERON:0002199;4.05e-09;46!UBERON:0002416;4.05e-09;46!UBERON:0003102;9.00e-08;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,2.18e-15,4;UBERON:0002097,3.85e-14,41;UBERON:0002199,3.02e-12,46;UBERON:0002416,3.02e-12,46;UBERON:0002118,3.33e-12,5;UBERON:0000992,1.39e-09,13;UBERON:0002329,1.08e-07,71;UBERON:0003059,1.08e-07,71;UBERON:0007282,1.08e-07,71;UBERON:0004290,1.08e-07,71;UBERON:0009618,1.08e-07,71;UBERON:0002384,1.27e-07,371;UBERON:0003077,1.53e-07,72;UBERON:0007285,1.53e-07,72;UBERON:0007524,2.15e-07,73;UBERON:0010260,7.84e-07,9 | |||
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| ||
|short_description=p5@SDC2 | |short_description=p5@SDC2 | ||
}} | }} |
Revision as of 12:31, 19 November 2012
Short description: | p5@SDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000521590_5end |
EntrezGene: | SDC2 |
HGNC: | 10659 |
UniProt: | E5RHU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.02e-20 | 23 |
smooth muscle cell of the umbilical artery | 2.18e-15 | 4 |
fibroblast | 1.74e-13 | 76 |
multi fate stem cell | 1.93e-10 | 427 |
somatic stem cell | 3.85e-10 | 433 |
stem cell | 9.40e-10 | 441 |
vascular associated smooth muscle cell | 2.33e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 2.18e-15 | 4 |
skin of body | 3.85e-14 | 41 |
integument | 3.02e-12 | 46 |
integumental system | 3.02e-12 | 46 |
right ovary | 3.33e-12 | 5 |
female gonad | 1.39e-09 | 13 |
somite | 1.08e-07 | 71 |
presomitic mesoderm | 1.08e-07 | 71 |
presumptive segmental plate | 1.08e-07 | 71 |
dermomyotome | 1.08e-07 | 71 |
trunk paraxial mesoderm | 1.08e-07 | 71 |
connective tissue | 1.27e-07 | 371 |
paraxial mesoderm | 1.53e-07 | 72 |
presumptive paraxial mesoderm | 1.53e-07 | 72 |
dense mesenchyme tissue | 2.15e-07 | 73 |
umbilical blood vessel | 7.84e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.63e-12 | 14 |
musculoskeletal system disease | 4.45e-07 | 5 |
myotonic disease | 4.45e-07 | 5 |
muscle tissue disease | 4.45e-07 | 5 |
myopathy | 4.45e-07 | 5 |
muscular disease | 4.45e-07 | 5 |
myotonic dystrophy | 4.45e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.