FFCP PHASE1:Hg19::chr7:142494356..142494390,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000542!1.59e-21!53;CL:0000051!1.59e-21!53;CL:0000838!8.07e-21!52;CL:0000084!1.98e-13!25;CL:0000827!1.98e-13!25;CL:0000791!7.43e-13!18;CL:0000789!7.43e-13!18;CL:0002420!7.43e-13!18;CL:0002419!7.43e-13!18;CL:0000790!7.43e-13!18;CL:0002087!5.98e-11!119;CL:0000738!2.21e-10!140;CL:0000236!1.27e-09!14;CL:0000625!9.50e-09!11;CL:0002031!1.58e-08!124;CL:0000945!3.88e-07!24;CL:0000826!3.88e-07!24;CL:0000037!9.51e-07!172;CL:0000566!9.51e-07!172 | |ontology_enrichment_celltype=CL:0000542!1.59e-21!53;CL:0000051!1.59e-21!53;CL:0000838!8.07e-21!52;CL:0000084!1.98e-13!25;CL:0000827!1.98e-13!25;CL:0000791!7.43e-13!18;CL:0000789!7.43e-13!18;CL:0002420!7.43e-13!18;CL:0002419!7.43e-13!18;CL:0000790!7.43e-13!18;CL:0002087!5.98e-11!119;CL:0000738!2.21e-10!140;CL:0000236!1.27e-09!14;CL:0000625!9.50e-09!11;CL:0002031!1.58e-08!124;CL:0000945!3.88e-07!24;CL:0000826!3.88e-07!24;CL:0000037!9.51e-07!172;CL:0000566!9.51e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.83e-17;25!CL:0000542;7.15e-17;53!CL:0000791;3.96e-16;18!CL:0000789;3.96e-16;18!CL:0002419;3.96e-16;18!CL:0000236;1.50e-11;13!CL:0000625;7.62e-11;11!CL:0000945;2.89e-09;24 | |ontology_enrichment_celltype_v019=CL:0000084;1.83e-17;25!CL:0000542;7.15e-17;53!CL:0000791;3.96e-16;18!CL:0000789;3.96e-16;18!CL:0002419;3.96e-16;18!CL:0000236;1.50e-11;13!CL:0000625;7.62e-11;11!CL:0000945;2.89e-09;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.92e-28,53;CL:0000051,1.92e-28,53;CL:0000838,1.59e-27,52;CL:0000084,2.05e-17,25;CL:0000827,2.05e-17,25;CL:0000791,4.38e-16,18;CL:0000789,4.38e-16,18;CL:0002420,4.38e-16,18;CL:0002419,4.38e-16,18;CL:0000790,4.38e-16,18;CL:0000236,3.00e-12,14;CL:0000625,8.34e-11,11;CL:0002087,2.32e-10,115;CL:0000945,2.97e-09,24;CL:0000826,2.97e-09,24;CL:0000738,7.84e-09,136;CL:0002031,6.11e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;7.15e-17;53!CL:0000790;3.96e-16;18 | |ontology_enrichment_development_v019=CL:0000051;7.15e-17;53!CL:0000790;3.96e-16;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.31e-08!115;UBERON:0003081!9.71e-08!216;UBERON:0004535!2.03e-07!110 | |ontology_enrichment_uberon=UBERON:0007023!9.31e-08!115;UBERON:0003081!9.71e-08!216;UBERON:0004535!2.03e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-07;15!UBERON:0000179;1.92e-07;15!UBERON:0000463;1.92e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-07;15!UBERON:0000179;1.92e-07;15!UBERON:0000463;1.92e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.44e-08,109;UBERON:0001009,1.44e-07,112;UBERON:0000178,1.97e-07,15;UBERON:0000179,1.97e-07,15;UBERON:0000463,1.97e-07,15 | |||
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| ||
|short_description=p1@TRBJ2-2P | |short_description=p1@TRBJ2-2P | ||
}} | }} |
Revision as of 16:32, 20 November 2012
Short description: | p1@TRBJ2-2P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRBJ2-2P_5end |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | 0bp_to_ENST00000390414, uc003wbh.3_5end |
EntrezGene: | NA |
HGNC: | 12170 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.92e-28 | 53 |
common lymphoid progenitor | 1.92e-28 | 53 |
lymphoid lineage restricted progenitor cell | 1.59e-27 | 52 |
T cell | 2.05e-17 | 25 |
pro-T cell | 2.05e-17 | 25 |
mature alpha-beta T cell | 4.38e-16 | 18 |
alpha-beta T cell | 4.38e-16 | 18 |
immature T cell | 4.38e-16 | 18 |
mature T cell | 4.38e-16 | 18 |
immature alpha-beta T cell | 4.38e-16 | 18 |
B cell | 3.00e-12 | 14 |
CD8-positive, alpha-beta T cell | 8.34e-11 | 11 |
nongranular leukocyte | 2.32e-10 | 115 |
lymphocyte of B lineage | 2.97e-09 | 24 |
pro-B cell | 2.97e-09 | 24 |
leukocyte | 7.84e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 6.11e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.44e-08 | 109 |
circulatory system | 1.44e-07 | 112 |
blood | 1.97e-07 | 15 |
haemolymphatic fluid | 1.97e-07 | 15 |
organism substance | 1.97e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.