FFCP PHASE1:Hg19::chr5:151054190..151054248,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.02e-31!180;CL:0000222!1.71e-19!119;CL:0000057!5.17e-18!75;CL:0000680!1.46e-13!57;CL:0000056!1.46e-13!57;CL:0000355!1.46e-13!57;CL:0000183!2.56e-13!59;CL:0000187!8.92e-13!54;CL:0000192!7.35e-11!42;CL:0000514!7.35e-11!42;CL:0000393!1.34e-10!60;CL:0000211!1.34e-10!60;CL:0000359!6.23e-09!32;CL:0000136!1.12e-08!15;CL:0000213!2.82e-07!57;CL:0000215!2.82e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.02e-31!180;CL:0000222!1.71e-19!119;CL:0000057!5.17e-18!75;CL:0000680!1.46e-13!57;CL:0000056!1.46e-13!57;CL:0000355!1.46e-13!57;CL:0000183!2.56e-13!59;CL:0000187!8.92e-13!54;CL:0000192!7.35e-11!42;CL:0000514!7.35e-11!42;CL:0000393!1.34e-10!60;CL:0000211!1.34e-10!60;CL:0000359!6.23e-09!32;CL:0000136!1.12e-08!15;CL:0000213!2.82e-07!57;CL:0000215!2.82e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.34e-10;55!CL:0000349;4.74e-09;19!CL:0000359;5.00e-09;32!CL:0000136;7.28e-09;13!CL:0000723;1.54e-08;61!CL:0000048;1.64e-08;58!CL:0000192;2.85e-08;43!CL:0000187;7.48e-08;55!CL:0002494;1.90e-07;16!CL:0002320;2.51e-07;188!CL:0000057;2.52e-07;73 | |ontology_enrichment_celltype_v019=CL:0000134;3.34e-10;55!CL:0000349;4.74e-09;19!CL:0000359;5.00e-09;32!CL:0000136;7.28e-09;13!CL:0000723;1.54e-08;61!CL:0000048;1.64e-08;58!CL:0000192;2.85e-08;43!CL:0000187;7.48e-08;55!CL:0002494;1.90e-07;16!CL:0002320;2.51e-07;188!CL:0000057;2.52e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.64e-19,121;CL:0000057,1.14e-18,76;CL:0000680,3.16e-14,58;CL:0000056,3.16e-14,58;CL:0000355,3.16e-14,58;CL:0000187,2.42e-13,55;CL:0000192,1.58e-11,43;CL:0000514,1.58e-11,43;CL:0000393,8.39e-11,61;CL:0000211,8.39e-11,61;CL:0000136,1.20e-09,15;CL:0000359,1.62e-09,32;CL:0000349,7.15e-09,19;CL:0000048,1.81e-08,427;CL:0000723,1.21e-07,433;CL:0002494,2.79e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.85e-08;43!CL:0000355;1.99e-07;58 | |ontology_enrichment_development_v019=CL:0000514;2.85e-08;43!CL:0000355;1.99e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.29e-18!84;UBERON:0000914!7.06e-16!83;UBERON:0002329!7.06e-16!83;UBERON:0003077!7.06e-16!83;UBERON:0003059!7.06e-16!83;UBERON:0007282!7.06e-16!83;UBERON:0009618!7.06e-16!83;UBERON:0007285!7.06e-16!83;UBERON:0002049!1.02e-15!79;UBERON:0007798!1.02e-15!79;UBERON:0001009!3.71e-15!113;UBERON:0004290!4.72e-15!70;UBERON:0004535!5.24e-15!110;UBERON:0001134!1.29e-14!61;UBERON:0002036!1.29e-14!61;UBERON:0003082!1.29e-14!61;UBERON:0002385!2.86e-14!63;UBERON:0001015!2.86e-14!63;UBERON:0000383!2.86e-14!63;UBERON:0000055!1.15e-13!69;UBERON:0001981!4.38e-13!60;UBERON:0007500!4.38e-13!60;UBERON:0004537!4.38e-13!60;UBERON:0006965!4.38e-13!60;UBERON:0001637!2.80e-11!42;UBERON:0003509!2.80e-11!42;UBERON:0004572!2.80e-11!42;UBERON:0005256!6.94e-11!143;UBERON:0003914!7.01e-11!118;UBERON:0000475!3.53e-10!365;UBERON:0000486!3.64e-10!82;UBERON:0000490!4.85e-10!138;UBERON:0004573!3.94e-09!33;UBERON:0004571!3.94e-09!33;UBERON:0000468!7.33e-09!659;UBERON:0000119!1.80e-07!312;UBERON:0000483!2.25e-07!309;UBERON:0000948!2.45e-07!24;UBERON:0005498!2.45e-07!24;UBERON:0004140!2.45e-07!24;UBERON:0009881!2.45e-07!24;UBERON:0004141!2.45e-07!24;UBERON:0003084!2.45e-07!24;UBERON:0007005!2.45e-07!24;UBERON:0004139!2.45e-07!24;UBERON:0004291!2.45e-07!24;UBERON:0007100!2.75e-07!27;UBERON:0002100!6.06e-07!216 | |ontology_enrichment_uberon=UBERON:0004872!7.29e-18!84;UBERON:0000914!7.06e-16!83;UBERON:0002329!7.06e-16!83;UBERON:0003077!7.06e-16!83;UBERON:0003059!7.06e-16!83;UBERON:0007282!7.06e-16!83;UBERON:0009618!7.06e-16!83;UBERON:0007285!7.06e-16!83;UBERON:0002049!1.02e-15!79;UBERON:0007798!1.02e-15!79;UBERON:0001009!3.71e-15!113;UBERON:0004290!4.72e-15!70;UBERON:0004535!5.24e-15!110;UBERON:0001134!1.29e-14!61;UBERON:0002036!1.29e-14!61;UBERON:0003082!1.29e-14!61;UBERON:0002385!2.86e-14!63;UBERON:0001015!2.86e-14!63;UBERON:0000383!2.86e-14!63;UBERON:0000055!1.15e-13!69;UBERON:0001981!4.38e-13!60;UBERON:0007500!4.38e-13!60;UBERON:0004537!4.38e-13!60;UBERON:0006965!4.38e-13!60;UBERON:0001637!2.80e-11!42;UBERON:0003509!2.80e-11!42;UBERON:0004572!2.80e-11!42;UBERON:0005256!6.94e-11!143;UBERON:0003914!7.01e-11!118;UBERON:0000475!3.53e-10!365;UBERON:0000486!3.64e-10!82;UBERON:0000490!4.85e-10!138;UBERON:0004573!3.94e-09!33;UBERON:0004571!3.94e-09!33;UBERON:0000468!7.33e-09!659;UBERON:0000119!1.80e-07!312;UBERON:0000483!2.25e-07!309;UBERON:0000948!2.45e-07!24;UBERON:0005498!2.45e-07!24;UBERON:0004140!2.45e-07!24;UBERON:0009881!2.45e-07!24;UBERON:0004141!2.45e-07!24;UBERON:0003084!2.45e-07!24;UBERON:0007005!2.45e-07!24;UBERON:0004139!2.45e-07!24;UBERON:0004291!2.45e-07!24;UBERON:0007100!2.75e-07!27;UBERON:0002100!6.06e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.18e-09;42!UBERON:0003509;6.18e-09;42!UBERON:0004572;6.18e-09;42!UBERON:0004573;1.69e-08;33!UBERON:0004571;1.69e-08;33!UBERON:0002384;1.32e-07;198!UBERON:0000478;1.49e-07;24!UBERON:0001013;3.30e-07;14!UBERON:0000948;4.80e-07;22!UBERON:0007100;5.93e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0001637;6.18e-09;42!UBERON:0003509;6.18e-09;42!UBERON:0004572;6.18e-09;42!UBERON:0004573;1.69e-08;33!UBERON:0004571;1.69e-08;33!UBERON:0002384;1.32e-07;198!UBERON:0000478;1.49e-07;24!UBERON:0001013;3.30e-07;14!UBERON:0000948;4.80e-07;22!UBERON:0007100;5.93e-07;25 | ||
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|phase1_expression=13.6258784452917,23.1228565802262,16.3507108751327,11.0080628188443,34.4160042709012,48.8509573496206,20.2639902534648,3.15859936713415,8.35794010239483,0.737201809504527,0.697801167972428,2.40285509343189,6.33040747748289,2.22779435328084,3.97676850873499,5.3786011716142,2.41077811209591,3.65155045193687,1.46379839637152,1.35433163884467,3.26401105990805,5.95563970808367,0.85870796139317,1.50561867580173,2.25976751270645,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,7.37770945674,2.68511379871414,3.97583067623023,6.01605492763067,8.40109809972778,11.1340032587154,40.8773291054214,1.13441780596881,1.77383517970051,2.19586964232815,0.785874452986276,0.364295288292542,0.370784442784429,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,1.39133685156694,2.58070378531837,3.12426451446835,4.52246353539208,3.77549492588915,2.20094433552054,1.67195973229448,3.35941786920128,4.26919515224052,4.01664735317604,0.805658634218294,2.28081631715554,2.92874469057803,0.735326160691737,9.72170337458112,1.87529429396568,2.02076435363553,2.0270066486998,3.06633274931766,0.949265659568129,3.29763139074733,0,0,0.436094052142534,38.7638122322348,6.96467814155189,3.31022952033047,13.7681577959431,5.32002573297536,10.0921968025615,8.5399196583764,21.2134091638758,2.17847724779836,4.84958419450877,5.06731899651722,4.69208025699287,7.49028701823999,0.234321431833797,1.24864030732128,0.570471821544449,1.19558944441441,1.52664848236894,1.13311061057692,1.26405726032024,3.0623125688234,2.7023549808589,2.58314452939414,8.31602000097437,13.8469480395992,1.82032272387605,5.03032699271367,0.841680569770331,1.00094815897571,0.554128230968366,4.38977620880838,14.0984386067549,13.3711872426871,6.01190570748112,3.58779271377724,5.97960688691989,6.99375273826554,7.50227740211006,3.7098910525838,7.9868567414145,6.88632368426882,6.58227695740938,7.4052123922511,3.02920529092937,2.39329736469978,5.01102776138317,9.58525899794859,3.42557133973977,2.54340888465731,0,0,0,0.243947412259191,0.132529768321485,0.69716365721711,0.725627385107593,0.756962552626885,0.36497735907583,4.69348596989448,8.36213219650751,2.76269842704961,0.464367928031979,3.60939740834793,0,0,0,0,0,0,0,0,0,5.16708818237254,1.40241773803446,8.231480226628,22.0513067078313,0,0,2.36315962672562,0,0.122988438543114,1.3725424823882,0.329250856225877,0,0.301586917234893,0.462942225792648,0.977424915930974,3.11980435583874,5.77325368101093,0.463721619900307,4.3441216867254,1.29929802984966,1.38895653772983,0.761016608938393,0,0,0.738651018262192,1.63802985597466,2.22946743433092,0,1.51183915378974,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0,0,0.12624243342638,0.253991577168676,1.14596527667483,0,3.4214489204541,0.616964956219941,1.50171528921959,0.285826432630578,0.560655421726804,1.74384027533312,1.24675085895615,9.95392211334889,3.57656445851882,5.917119267892,5.05282421511254,1.04007436911366,1.80045161983499,0,1.5985330740966,4.14636181608628,20.0769993994834,6.58592269424615,2.93162565864362,3.909311436168,2.37585561880029,5.72734816413214,5.22920075160176,8.29775826811074,0,0,0,12.2208676300707,12.6348129417525,1.42636905040718,6.22559618670591,6.1642896765115,1.61154866915906,0,0,0,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,2.08575535922538,3.50119364741774,2.71265023699736,11.6463682457252,13.9174611261786,7.7274183366628,5.97421216462837,7.52365249319297,13.6444502433591,5.17365356462525,2.65690239414175,9.40282759562686,1.65078867489357,2.93701736194111,8.92172901908225,0,0,0,1.21251028578504,8.32177197552485,8.76931850656073,11.164851351845,9.66810431714793,30.0306301043389,20.2459855824008,8.69902323413396,20.7501558275254,8.90508398669946,2.46735510084249,9.41077144159573,0.821271560138091,3.11552657510173,4.29978400301849,0,1.60405176242628,0,4.01850568576124,4.55227920016793,3.67148361886388,0.451199612907412,0.308061348417659,0,0,0.527758144464379,1.13733384070897,1.53084334748864,4.53423423814493,10.7959076883203,0.541892875087706,2.50844886927427,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.9273691048295,0.824125183365091,0.082509499920588,0,1.30012049207304,8.03419649220798,0.676695028044854,2.92692372517824,3.68408819342711,2.48105830472155,3.97454906012612,3.33538396002726,1.87498580315422,3.65031346151623,0,0.192190067365106,0,0,2.32422774648643,19.203553156669,0.6970372701606,1.54016790088044,2.12922412126809,2.60979897622522,3.89180860118232,6.29749501664761,2.60510858551767,2.84741482246853,12.5815927989724,4.09436466098134,3.42351190427136,1.27281299170375,8.63443504219153,3.23770423649967,6.86342574340137,5.3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| ||
|short_description=p8@SPARC | |short_description=p8@SPARC | ||
}} | }} |
Revision as of 03:33, 21 November 2012
Short description: | p8@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_uc003lug.2_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.64e-19 | 121 |
fibroblast | 1.14e-18 | 76 |
muscle precursor cell | 3.16e-14 | 58 |
myoblast | 3.16e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.16e-14 | 58 |
muscle cell | 2.42e-13 | 55 |
smooth muscle cell | 1.58e-11 | 43 |
smooth muscle myoblast | 1.58e-11 | 43 |
electrically responsive cell | 8.39e-11 | 61 |
electrically active cell | 8.39e-11 | 61 |
fat cell | 1.20e-09 | 15 |
vascular associated smooth muscle cell | 1.62e-09 | 32 |
extraembryonic cell | 7.15e-09 | 19 |
multi fate stem cell | 1.81e-08 | 427 |
somatic stem cell | 1.21e-07 | 433 |
cardiocyte | 2.79e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.