FFCP PHASE1:Hg19::chr17:74136069..74136082,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002322!8.14e-15!5;CL:0000242!2.66e-07!2 | |ontology_enrichment_celltype=CL:0002322!8.14e-15!5;CL:0000242!2.66e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000313;5.56e-16;1!CL:0000167;2.56e-15;1!CL:0000164;2.56e-15;1!CL:0000502;2.56e-15;1!CL:0000172;2.56e-15;1!CL:0000173;2.56e-15;1!CL:0000159;1.20e-08;2!CL:1000415;1.44e-08;2!CL:0002535;1.61e-08;2!CL:0000123;2.57e-08;2!CL:0000242;2.57e-08;2 | |ontology_enrichment_celltype_v019=CL:0000313;5.56e-16;1!CL:0000167;2.56e-15;1!CL:0000164;2.56e-15;1!CL:0000502;2.56e-15;1!CL:0000172;2.56e-15;1!CL:0000173;2.56e-15;1!CL:0000159;1.20e-08;2!CL:1000415;1.44e-08;2!CL:0002535;1.61e-08;2!CL:0000123;2.57e-08;2!CL:0000242;2.57e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.56e-16,1;CL:0000167,1.78e-15,1;CL:0000164,1.78e-15,1;CL:0000502,1.78e-15,1;CL:0000172,1.78e-15,1;CL:0000173,1.78e-15,1;CL:0002351,1.78e-15,1;CL:0000159,1.20e-08,2;CL:1000415,1.39e-08,2;CL:0002535,1.61e-08,2;CL:0000242,2.67e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002351;2.56e-15;1!UBERON:0007297;2.57e-08;2 | |ontology_enrichment_development_v019=CL:0002351;2.56e-15;1!UBERON:0007297;2.57e-08;2 | ||
|ontology_enrichment_disease=DOID:3119!2.45e-07!14 | |ontology_enrichment_disease=DOID:3119!2.45e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2152;5.56e-16;1!DOID:4430;2.56e-15;1!DOID:3119;6.83e-10;14 | |ontology_enrichment_disease_v019=DOID:2152;5.56e-16;1!DOID:4430;2.56e-15;1!DOID:3119;6.83e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,5.56e-16,1;DOID:4430,1.78e-15,1;DOID:3119,6.83e-10,14;DOID:0050687,3.27e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.18e-15!11;UBERON:0000473!3.81e-12!8;UBERON:0006947!5.77e-10!3;UBERON:0004054!5.77e-10!3;UBERON:0000058!1.72e-09!26;UBERON:0003101!5.98e-09!22;UBERON:0000079!5.98e-09!22;UBERON:0000489!9.58e-09!32;UBERON:0003886!7.39e-08!63;UBERON:0000466!8.39e-08!126;UBERON:0000464!1.03e-07!104;UBERON:0005904!1.48e-07!4;UBERON:0002113!3.07e-07!27;UBERON:0003918!3.07e-07!27;UBERON:0005095!3.07e-07!27;UBERON:0007687!3.07e-07!27;UBERON:0000080!4.13e-07!18;UBERON:0002120!4.13e-07!18;UBERON:0004875!4.13e-07!18;UBERON:0005721!4.13e-07!18;UBERON:0005754!4.13e-07!18;UBERON:0007297!4.13e-07!18;UBERON:0002294!5.37e-07!7;UBERON:0001173!5.37e-07!7;UBERON:0004912!5.37e-07!7 | |ontology_enrichment_uberon=UBERON:0003135!1.18e-15!11;UBERON:0000473!3.81e-12!8;UBERON:0006947!5.77e-10!3;UBERON:0004054!5.77e-10!3;UBERON:0000058!1.72e-09!26;UBERON:0003101!5.98e-09!22;UBERON:0000079!5.98e-09!22;UBERON:0000489!9.58e-09!32;UBERON:0003886!7.39e-08!63;UBERON:0000466!8.39e-08!126;UBERON:0000464!1.03e-07!104;UBERON:0005904!1.48e-07!4;UBERON:0002113!3.07e-07!27;UBERON:0003918!3.07e-07!27;UBERON:0005095!3.07e-07!27;UBERON:0007687!3.07e-07!27;UBERON:0000080!4.13e-07!18;UBERON:0002120!4.13e-07!18;UBERON:0004875!4.13e-07!18;UBERON:0005721!4.13e-07!18;UBERON:0005754!4.13e-07!18;UBERON:0007297!4.13e-07!18;UBERON:0002294!5.37e-07!7;UBERON:0001173!5.37e-07!7;UBERON:0004912!5.37e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.39e-19;3!UBERON:0004054;1.39e-19;3!UBERON:0004911;5.56e-16;1!UBERON:0001000;2.56e-15;1!UBERON:0001301;2.56e-15;1!UBERON:0005352;2.56e-15;1!UBERON:0005904;6.04e-15;4!UBERON:0004909;1.20e-08;2!UBERON:0006955;1.61e-08;2!UBERON:0004801;1.61e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.39e-19;3!UBERON:0004054;1.39e-19;3!UBERON:0004911;5.56e-16;1!UBERON:0001000;2.56e-15;1!UBERON:0001301;2.56e-15;1!UBERON:0005352;2.56e-15;1!UBERON:0005904;6.04e-15;4!UBERON:0004909;1.20e-08;2!UBERON:0006955;1.61e-08;2!UBERON:0004801;1.61e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.53e-19,3;UBERON:0004054,1.53e-19,3;UBERON:0004911,5.56e-16,1;UBERON:0001000,2.06e-15,1;UBERON:0005352,2.06e-15,1;UBERON:0001301,3.66e-15,1;UBERON:0005904,6.49e-15,4;UBERON:0004909,1.20e-08,2;UBERON:0006955,1.61e-08,2;UBERON:0004801,1.61e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.132529768321485,0.69716365721711,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,1.46139224653261,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,5.54252045279407,0,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.230850775511391,0,0,3.14151755434202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,0,6.4531956302485,0,0.213452994739353,0,6.33997835478066,0,3.60349495510126,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.315222829196793,1.15400093896996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0,0.124192805882767,0,0,0,0,0,0.936669811613763,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,13.8700735429262,0.392600934460972,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0.0771741581079447,0.218559560503957,8.93602863086893,0,1.64973582971138,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.801652215796681,0.0918948995348449,0,0.378893491091197,0.267964130156178,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0.404234377916439,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.132529768321485,0.69716365721711,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,1.46139224653261,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,5.54252045279407,0,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.230850775511391,0,0,3.14151755434202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,0,6.4531956302485,0,0.213452994739353,0,6.33997835478066,0,3.60349495510126,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0.315222829196793,1.15400093896996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0,0.124192805882767,0,0,0,0,0,0.936669811613763,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,13.8700735429262,0.392600934460972,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0.0771741581079447,0.218559560503957,8.93602863086893,0,1.64973582971138,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.801652215796681,0.0918948995348449,0,0.378893491091197,0.267964130156178,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0.404234377916439,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p3@AB463648,p3@AB464532 | |short_description=p3@AB463648,p3@AB464532 | ||
}} | }} |
Revision as of 04:14, 21 November 2012
Short description: | p3@AB463648, p3@AB464532 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AB463648_5end, CAGE_peak_3_at_AB464532_5end |
Coexpression cluster: | C2436_serous_gastric_argyrophil_gall_smallcell_gastrointestinal_acantholytic |
Association with transcript: | 394bp_to_AB463648, AB464532_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.56e-16 | 1 |
peptide hormone secreting cell | 1.78e-15 | 1 |
enteroendocrine cell | 1.78e-15 | 1 |
type D enteroendocrine cell | 1.78e-15 | 1 |
somatostatin secreting cell | 1.78e-15 | 1 |
pancreatic D cell | 1.78e-15 | 1 |
progenitor cell of endocrine pancreas | 1.78e-15 | 1 |
seromucus secreting cell | 1.20e-08 | 2 |
epithelial cell of gall bladder | 1.39e-08 | 2 |
epithelial cell of cervix | 1.61e-08 | 2 |
Merkel cell | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.53e-19 | 3 |
internal male genitalia | 1.53e-19 | 3 |
epithelium of female gonad | 5.56e-16 | 1 |
vas deferens | 2.06e-15 | 1 |
spermatic cord | 2.06e-15 | 1 |
epididymis | 3.66e-15 | 1 |
duct of male reproductive system | 6.49e-15 | 4 |
epithelium of gonad | 1.20e-08 | 2 |
uterine epithelium | 1.61e-08 | 2 |
cervix epithelium | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.56e-16 | 1 |
somatostatinoma | 1.78e-15 | 1 |
gastrointestinal system cancer | 6.83e-10 | 14 |
cell type cancer | 3.27e-07 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.