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MacroAPE 1083:Motif335: Difference between revisions

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9-106D6;0.0423106!10464-106H5;0.0382157!10827-111C8;0.0170266!10789-110H6;0.0631717!10828-111C9;0.123465!10788-110H5;0.114619!10792-110H9;0.0664675!10765-110E9;0.082586!10829-111D1;0.0578698!10830-111D2;0.0480149!10831-111D3;0.187452!10832-111D4;0.0750511!10833-111D5;0.0498249!10764-110E8;0.0655189!10770-110F5;0.209369!10399-106A3;0.0532701!10400-106A4;0.0493737!10405-106A9;0.0614363!10834-111D6;0.0662408!10835-111D7;0.0732887!10836-111D8;0.0335717!10837-111D9;0.0296188!10699-109G6;0.0573079!10802-111A1;0.0513798!10796-110I4;0.033952!10010-101C1;0.381299!10810-111A9;0.0349236!10421-106C7;0.0704752!10708-109H6;0.078313!12235-129G3;0.308116!12236-129G4;0.0199555!12237-129G5;0.117264!10167-103B5;0.023955!10151-102I7;0.521553!10428-106D5;0.24351!10795-110I3;0.97885!10805-111A4;0.0508633!10052-101G7;0.0789503!10189-103D9;0.0333013!10589-108D4;0.00690222!10425-106D2;0.0478059!10427-106D4;0.378928!10702-109G9;0.0711038!10432-106D9;0.0406187!10496-107C1;0.477704!10718-109I7;0.235327!10011-101C2;0.0616238!10053-101G8;0.0183075!10686-109F2;0.999095!10084-102B3;0.334136!10012-101C3;0.318879!10085-102B4;0.379461!10482-107A5;0.393485!10419-106C5;0.921603!10080-102A8;0.835716!10760-110E4;0.025068!10709-109H7;0.758642!10710-109H8;0.815706!10703-109H1;0.514579!10719-109I8;0.0797064!10642-109A3;0.0652056!10177-103C6;0.0912268!10164-103B2;0.499598!10173-103C2;0.312571!10166-103B4;0.753099!10083-102B2;0.396538!10188-103D8;0.503622!10552-107I3;0.298618!10553-107I4;0.0335832!10013-101C4;0.0667314!10536-107G5;0.0166544!10618-108G6;0.0595124!10423-106C9;0.62896!10785-110H2;0.588408!12238-129G6;0.947354!12239-129G7;0.0261053!12240-129G8;0.0371019!10416-106C2;0.159453!10801-110I9;0.0419362!10766-110F1;0.052197!10824-111C5;0.0855264!10825-111C6;0.0377535!10826-111C7;0.0387208!10454-106G4;0.0420671!10409-106B4;0.0342085!10638-108I8;0.0767943!10636-108I6;0.234181!10513-107D9;0.509414!10420-106C6;0.816484!10082-102B1;0.10853!10014-101C5;0.00227201!10070-101I7;0.00618031!10452-106G2;0.00765513!10453-106G3;0.021429!10449-106F8;0.0242942!10042-101F6;0.0235621!10069-101I6;0.198583!10193-103E4;0.0816162!10631-108I1;0.430702!10438-106E6;0.0370105!10488-107B2;0.434596!10196-103E7;0.01411!10071-101I8;0.0494022!10071-101I8;0.00768628!10041-101F5;0.689223!10451-106G1;0.125057!10450-106F9;0.0101506!10604-108F1;0.0159695!10605-108F2;0.45786!10606-108F3;0.323467!10603-108E9;0.423817!10497-107C2;0.343816!10448-106F7;0.935003!10643-109A4;0.165669!10426-106D3;0.0867415!10431-106D8;0.229106!10197-103E8;0.978184!10443-106F2;0.0281874!10815-111B5;0.0696251!10816-111B6;0.0794517!10817-111B7;0.0799178!10015-101C6;0.081702!10410-106B5;0.00643477!10054-101G9;0.17665!10758-110E2;0.0908131!10711-109H9;0.0808877!10040-101F4;0.0357375!10470-106I2;0.384771!10415-106C1;0.366994!10198-103E9;0.776021!10614-108G2;0.0125248!10612-108F9;0.692127!10549-107H9;0.51954!10615-108G3;0.0636263!10487-107B1;0.218938!10433-106E1;0.0923376!10688-109F4;0.117013!10444-106F3;0.05162!10444-106F3;0.867574!10485-107A8;0.775168!10413-106B8;0.00666272!10175-103C4;0.031724!10161-103A8;0.282551!12131-128D7;0.208814!10624-108H3;0.973855!10712-109I1;0.543091!10205-103F7;0.0437515!10206-103F8;0.0581858!10207-103F9;0.0693542!10050-101G5;0.0552835!10051-101G6;0.0174388!10016-101C7;0.0458441!10046-101G1;0.0352713!10778-110G4;0.0526827!10633-108I3;0.186909!10818-111B8;0.783334!10819-111B9;0.0382764!10820-111C1;0.0388927!10484-107A7;0.0383118!10808-111A7;0.0427944!10169-103B7;0.0522508!10153-102I9;0.472871!13425-144D5;0.238774!13433-144E4;0.331859!13437-144E8;0.530625!11904-125F5;0.578965!11905-125F6;0.699295!10039-101F3;0.137144!10791-110H8;0.349064!10017-101C8;0.342026!10045-101F9;0.0344038!10509-107D5;0.0391295!10839-111E2;0.104358!10692-109F8;0.0249378!10079-102A7;0.136594!10078-102A6;0.0713125!10721-110A1;0.0793821!10569-108B2;0.0832357!10570-108B3;0.97333!10571-108B4;0.766515!10647-109A8;0.76094!10752-110D5;0.594594!10782-110G8;0.0740402!10726-110A6;0.516292!10018-101C9;0.665794!10086-102B5;0.651252!10182-103D2;0.693497!10165-103B3;0.280433!10499-107C4;0.227059!10408-106B3;0.522576!10019-101D1;0.0443906!10068-101I5;0.0126237!10075-102A3;0.0150851!10077-102A5;0.00737361!10727-110A7;0.40631!10775-110G1;0.0423841!10412-106B7;0.061161!12231-129F8;0.94303!12232-129F9;0.0799534!12233-129G1;0.0966551!12234-129G2;0.10823!10414-106B9;0.144812!10170-103B8;0.744675!10183-103D3;0.673119!10150-102I6;0.571246!10174-103C3;0.302491!10155-103A2;0.274399!10038-101F2;0.175974!10838-111E1;0.192462!10759-110E3;0.189784!10514-107E1;0.674104!10465-106H6;0.211241!10691-109F7;0.381298!10843-111E6;0.0665693!10844-111E7;0.0181868!11747-123G1;0.119071!11748-123G2;0.135877!11749-123G3;0.678499!11750-123G4;0.346474!11751-123G5;0.836291!11840-124H4;0.627236!11752-123G6;0.966554!11753-123G7;0.921076!11754-123G8;0.640838!11755-123G9;0.35359!11756-123H1;0.668179!11833-124G6;0.488721!11760-123H5;0.395631!11836-124G9;0.523219!11758-123H3;0.941289!11835-124G8;0.214891!11762-123H7;0.124534!11838-124H2;0.280399!11757-123H2;0.214726!11759-123H4;0.264253!11761-123H6;0.818265!11842-124H6;0.174859!11837-124H1;0.19105!10568-108B1;0.157603!13230-141I8;0.289653!13231-141I9;0.649667!10696-109G3;0.882964!10493-107B7;0.284008!10494-107B8;0.584068!10850-111F4;0.340602!10851-111F5;0.0181027!10852-111F6;0.43313!10853-111F7;0.970741!10854-111F8;0.0446801!10855-111F9;0.079457!10856-111G1;0.191573!10847-111F1;0.794226!10846-111E9;0.157503!10848-111F2;0.735452!10845-111E8;0.207029!10857-111G2;0.00445301!10858-111G3;0.0948281!10156-103A3;0.16844!11901-125F2;0.287222!11902-125F3;0.927973!11903-125F4;0.484369!10689-109F5;0.747125!10648-109A9;0.0317367!10784-110H1;0.0439203!10744-110C6;0.0617313!10772-110F7;0.0268799!10474-106I6;0.0734555!10600-108E6;0.0419505!10684-109E9;0.403757!12226-129F3;0.2783!12227-129F4;0.0973006!10508-107D4;0.0262872!10539-107G8;0.0960244!10607-108F4;0.00718293!10555-107I6;0.0553736!10774-110F9;0.0161806!10637-108I7;0.0398875!10663-109C6;0.0256323!10728-110A8;0.0393271!10729-110A9;0.0257555!10430-106D7;0.112295!10730-110B1;0.14007!10813-111B3;0.137239!10812-111B2;0.454072!10037-101F1;0.18692!10172-103C1;0.33725!10163-103B1;0.649533!10076-102A4;0.2446!10073-102A1;0.396708!10036-101E9;0.668951!10195-103E6;0.307403!10277-104E7;0.357067!10434-106E2;0.217731!10550-107I1;0.243473!10545-107H5;0.981532!10544-107H4;0.824088!10704-109H2;0.842334!10510-107D6;0.534476!10558-107I9;0.619525!10020-101D2;0.840862!10732-110B3;0.0960606!10049-101G4;0.145353!10698-109G5;0.024963!10437-106E5;0.816983!10417-106C3;0.442593!10035-101E8;0.0614356!10171-103B9;0.352993!10157-103A4;0.586888!10034-101E7;0.322715!10072-101I9;0.313163!10199-103F1;0.786339!10200-103F2;0.00448075!10697-109G4;0.0225006!10723-110A3;0.0529001!10179-103C8;0.0394696!10160-103A7;0.54579!10180-103C9;0.767042!10162-103A9;0.695044!10021-101D3;0.425718!10840-111E3;0.0118335!10706-109H4;0.0419868!10033-101E6;0.222621!10032-101E5;0.313589!10490-107B4;0.353614!10439-106E7;0.524644!10022-101D4;0.493472!10176-103C5;0.023359!10469-106I1;0.410354!10067-101I4;0.179855!10411-106B6;0.0530079!10471-106I3;0.160076!10030-101E3;0.159609!10475-106I7;0.140684!10787-110H4;0.0152774!10477-106I9;0.0448402!10695-109G2;0.0191372!11771-123I7;0.208123!11772-123I8;0.18268!11773-123I9;0.0520472!10093-102C3;0.02829!10442-106F1;0.00369206!10442-106F1;0.0103019!10201-103F3;0.00868035!10639-108I9;0.0724156!11843-124H7;0.0161316!11841-124H5;0.683787!10693-109F9;0.0492697!10436-106E4;0.029932!10483-107A6;0.703834!10282-104F3;0.520749!10023-101D5;0.434406!10066-101I3;0.103944!10065-101I2;0.208758!10800-110I8;0.00691925!10610-108F7;0.218008!10841-111E4;0.407181!10541-107H1;0.0342536!10842-111E5;0.405849!10562-108A4;0.0360945!10024-101D6;0.949733!10064-101I1;0.00544177!10609-108F6;0.00418985!10048-101G3;0.53708!10781-110G7;0.0439888!10181-103D1;0.765697!10159-103A6;0.387683!10056-101H2;0.276572!10737-110B8;0.281477!10025-101D7;0.180522!10044-101F8;0.173561!10424-106D1;0.0458965!10463-106H4;0.0653164!10616-108G4;0.170762!10486-107A9;0.461259!10062-101H8;0.209548!10202-103F4;0.00870079!10158-103A5;0.00352912!10441-106E9;0.16262!10031-101E4;0.0538543!10063-101H9;0.294952!10063-101H9;0.622769!11763-123H8;0.00871387!11765-123I1;0.644742!11768-123I4;0.408453!10807-111A6;0.402357!10790-110H7;0.260486!10798-110I6;0.0137064!10786-110H3;0.0806935!10591-108D6;0.194356!10593-108D8;0.268592!10590-108D5;0.286308!10026-101D8;0.0606004!10096-102C6;0.260989!10168-103B6;0.198846!10154-103A1;0.400796!10209-103G2;0.275762!10061-101H7;0.00757631!10027-101D9;0.0142409!10043-101F7;0.097027!10783-110G9;0.929282!10028-101E1;0.719672!10060-101H6;0.0168969!10203-103F5;0.0136731!10059-101H5;0.00476229!10047-101G2;0.0104432!10029-101E2;0.00496511!10058-101H4;0.00692132!10418-106C4;0.0166234!10492-107B6;0.434345!10694-109G1;0.131976!10797-110I5;0.263151!10057-101H3;0.0531974!10100-102D1;0.0298296!10055-101H1;0.031592!10204-103F6;0.016552!10191-103E2;0.0184201!10563-108A5;0.00837875
|name=motif335
|name=motif335
|tomtom_result=SP1#MA0079.2;2;0.000186652;0.0888464;0.177693;8;GGGAGGAG;GGGGGCGGGG;-!Klf4#MA0039.2;1;0.00488583;2.32566;1;8;GGGAGGAG;TGGGTGGGGC;+!CHA4#MA0283.1;-1;0.0050267;2.39271;1;7;GGGAGGAG;GGCGGAGA;+!btd#MA0443.1;3;0.00911873;4.34052;1;7;GGGAGGAG;AGGGGGCGGA;+!YML081W#MA0431.1;0;0.00961937;4.57882;1;8;GGGAGGAG;GTGCGGGGT;-!SP1#MA0079.2;1;0.0112207;5.34108;1;8;GGGAGGAG;GGGGCGGGGT;+!MZF1_5-13#MA0057.1;-1;0.0155245;7.38964;1;7;GGGAGGAG;GGAGGGGGAA;+!MSN4#MA0342.1;-3;0.0183664;8.74243;1;5;GGGAGGAG;AGGGG;+!RGM1#MA0366.1;-3;0.0183664;8.74243;1;5;GGGAGGAG;AGGGG;+!SPI1#MA0080.1;0;0.0201031;9.56906;1;6;GGGAGGAG;CGGAAG;+
}}
}}

Latest revision as of 12:57, 7 September 2012

Full Name: motif335

Motif matrix
POACGT
01951024281569537493
02431014661676702938
0316588181741363985224
04163000456614867332
0552887671678682461
06803861001595202726
07101419125754491017480
081208360771513376887

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.220.0001866520.08884640.1776938GGGAGGAGGGGGGCGGGG-
Klf4#MA0039.210.004885832.3256618GGGAGGAGTGGGTGGGGC+
CHA4#MA0283.1-10.00502672.3927117GGGAGGAGGGCGGAGA+
btd#MA0443.130.009118734.3405217GGGAGGAGAGGGGGCGGA+
YML081W#MA0431.100.009619374.5788218GGGAGGAGGTGCGGGGT-
SP1#MA0079.210.01122075.3410818GGGAGGAGGGGGCGGGGT+
MZF1_5-13#MA0057.1-10.01552457.3896417GGGAGGAGGGAGGGGGAA+
MSN4#MA0342.1-30.01836648.7424315GGGAGGAGAGGGG+
RGM1#MA0366.1-30.01836648.7424315GGGAGGAGAGGGG+
SPI1#MA0080.100.02010319.5690616GGGAGGAGCGGAAG+
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