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MacroAPE 1083:Motif ACTGGN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;25920;0;0;0!02;0;25920;0;0!03;0;0;0;25920!04;0;0;25920;0!05;0;0;25920;0!06;6480;6480;6480;6480 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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;0.0221932!10828-111C9;0.128311!10788-110H5;0.00776313!10792-110H9;0.0829339!10765-110E9;0.0391709!10829-111D1;0.0313624!10830-111D2;0.0273102!10831-111D3;0.0145218!10832-111D4;0.135292!10833-111D5;0.0371613!10764-110E8;0.0400271!10770-110F5;0.0123439!10399-106A3;0.0893708!10400-106A4;0.0573304!10405-106A9;0.0562423!10834-111D6;0.0724967!10835-111D7;0.019174!10836-111D8;0.0929433!10837-111D9;0.0246061!10699-109G6;0.0302663!10802-111A1;0.00791339!10796-110I4;0.0127076!10010-101C1;0.432951!10810-111A9;0.101241!10421-106C7;0.246484!10708-109H6;0.0758752!12235-129G3;0.692304!12236-129G4;0.105241!12237-129G5;0.484024!10167-103B5;0.151318!10151-102I7;0.936786!10428-106D5;0.783593!10795-110I3;0.214655!10805-111A4;0.327799!10052-101G7;0.243385!10189-103D9;0.0643292!10589-108D4;0.118279!10425-106D2;0.16648!10427-106D4;0.433172!10702-109G9;0.0450312!10432-106D9;0.310636!10496-107C1;0.600942!10718-109I7;0.935988!10011-101C2;0.0294524!10053-101G8;0.0359382!10686-109F2;0.654241!10084-102B3;0.543315!10012-101C3;0.98844!10085-102B4;0.796917!10482-107A5;0.827375!10419-106C5;0.634105!10080-102A8;0.271708!10760-110E4;0.0305568!10709-109H7;0.544789!10710-109H8;0.748596!10703-109H1;0.559654!10719-109I8;0.176519!10642-109A3;0.513336!10177-103C6;0.192653!10164-103B2;0.753972!10173-103C2;0.829673!10166-103B4;0.91627!10083-102B2;0.689995!10188-103D8;0.854364!10552-107I3;0.650967!10553-107I4;0.291707!10013-101C4;0.931805!10536-107G5;0.0349748!10618-108G6;0.533182!10423-106C9;0.505526!10785-110H2;0.268279!12238-129G6;0.312675!12239-129G7;0.0350565!12240-129G8;0.0597682!10416-106C2;0.0809646!10801-110I9;0.0323534!10766-110F1;0.0503384!10824-111C5;0.100557!10825-111C6;0.0967503!10826-111C7;0.153563!10454-106G4;0.136642!10409-106B4;0.168111!10638-108I8;0.117259!10636-108I6;0.574786!10513-107D9;0.794632!10420-106C6;0.580917!10082-102B1;0.337589!10014-101C5;0.154745!10070-101I7;0.0433726!10452-106G2;0.070614!10453-106G3;0.28801!10449-106F8;0.129098!10042-101F6;0.125043!10069-101I6;0.807932!10193-103E4;0.133881!10631-108I1;0.91736!10438-106E6;0.0844051!10488-107B2;0.982646!10196-103E7;0.612504!10071-101I8;0.0179732!10071-101I8;0.0482396!10041-101F5;0.983654!10451-106G1;0.28288!10450-106F9;0.193538!10604-108F1;0.204069!10605-108F2;0.192024!10606-108F3;0.417447!10603-108E9;0.327507!10497-107C2;0.31989!10448-106F7;0.800757!10643-109A4;0.230108!10426-106D3;0.578935!10431-106D8;0.989391!10197-103E8;0.445901!10443-106F2;0.134782!10815-111B5;0.651403!10816-111B6;0.262803!10817-111B7;0.285962!10015-101C6;0.272407!10410-106B5;0.0440591!10054-101G9;0.852411!10758-110E2;0.116367!10711-109H9;0.100949!10040-101F4;0.0815122!10470-106I2;0.940928!10415-106C1;0.885754!10198-103E9;0.431897!10614-108G2;0.071469!10612-108F9;0.905485!10549-107H9;0.782692!10615-108G3;0.22961!10487-107B1;0.12729!10433-106E1;0.390706!10688-109F4;0.607461!10444-106F3;0.969197!10444-106F3;0.170446!10485-107A8;0.201095!10413-106B8;0.504098!10175-103C4;0.281693!10161-103A8;0.875753!12131-128D7;0.818417!10624-108H3;0.0439288!10712-109I1;0.726172!10205-103F7;0.0268221!10206-103F8;0.199007!10207-103F9;0.276276!10050-101G5;0.269908!10051-101G6;0.34138!10016-101C7;0.496945!10046-101G1;0.348634!10778-110G4;0.256216!10633-108I3;0.335082!10818-111B8;0.765627!10819-111B9;0.537465!10820-111C1;0.520151!10484-107A7;0.578016!10808-111A7;0.576941!10169-103B7;0.0369302!10153-102I9;0.881328!13425-144D5;0.715261!13433-144E4;0.653647!13437-144E8;0.597973!11904-125F5;0.479713!11905-125F6;0.382533!10039-101F3;0.301025!10791-110H8;0.927522!10017-101C8;0.429984!10045-101F9;0.0297695!10509-107D5;0.0249053!10839-111E2;0.8061!10692-109F8;0.833933!10079-102A7;0.149073!10078-102A6;0.329935!10721-110A1;0.357777!10569-108B2;0.0758733!10570-108B3;0.235121!10571-108B4;0.486467!10647-109A8;0.28949!10752-110D5;0.2136!10782-110G8;0.0825735!10726-110A6;0.878854!10018-101C9;0.18452!10086-102B5;0.0988494!10182-103D2;0.348829!10165-103B3;0.720104!10499-107C4;0.744723!10408-106B3;0.433181!10019-101D1;0.968643!10068-101I5;0.00524231!10075-102A3;0.0164591!10077-102A5;0.0124803!10727-110A7;0.221982!10775-110G1;0.0687029!10412-106B7;0.0896054!12231-129F8;0.599246!12232-129F9;0.27172!12233-129G1;0.157118!12234-129G2;0.225028!10414-106B9;0.275081!10170-103B8;0.634671!10183-103D3;0.991627!10150-102I6;0.875598!10174-103C3;0.777629!10155-103A2;0.499106!10038-101F2;0.519056!10838-111E1;0.635503!10759-110E3;0.151139!10514-107E1;0.286143!10465-106H6;0.73919!10691-109F7;0.293128!10843-111E6;0.392399!10844-111E7;0.0624039!11747-123G1;0.225009!11748-123G2;0.425166!11749-123G3;0.421588!11750-123G4;0.787134!11751-123G5;0.128007!11840-124H4;0.277551!11752-123G6;0.31436!11753-123G7;0.153015!11754-123G8;0.203925!11755-123G9;0.779179!11756-123H1;0.685628!11833-124G6;0.466929!11760-123H5;0.652959!11836-124G9;0.67387!11758-123H3;0.489726!11835-124G8;0.670311!11762-123H7;0.449181!11838-124H2;0.900404!11757-123H2;0.440754!11759-123H4;0.813284!11761-123H6;0.805175!11842-124H6;0.952859!11837-124H1;0.42064!10568-108B1;0.361247!13230-141I8;0.228822!13231-141I9;0.980282!10696-109G3;0.98636!10493-107B7;0.162158!10494-107B8;0.341105!10850-111F4;0.49345!10851-111F5;0.266345!10852-111F6;0.410461!10853-111F7;0.57896!10854-111F8;0.175752!10855-111F9;0.604664!10856-111G1;0.920259!10847-111F1;0.781097!10846-111E9;0.218869!10848-111F2;0.667863!10845-111E8;0.191172!10857-111G2;0.999526!10858-111G3;0.318806!10156-103A3;0.340376!11901-125F2;0.781826!11902-125F3;0.867851!11903-125F4;0.914677!10689-109F5;0.694583!10648-109A9;0.310151!10784-110H1;0.721716!10744-110C6;0.328385!10772-110F7;0.126452!10474-106I6;0.0699399!10600-108E6;0.103233!10684-109E9;0.480016!12226-129F3;0.491689!12227-129F4;0.757348!10508-107D4;0.36636!10539-107G8;0.0922017!10607-108F4;0.115352!10555-107I6;0.354648!10774-110F9;0.0504252!10637-108I7;0.165837!10663-109C6;0.636121!10728-110A8;0.986306!10729-110A9;0.531325!10430-106D7;0.737907!10730-110B1;0.104751!10813-111B3;0.672241!10812-111B2;0.0404661!10037-101F1;0.0243142!10172-103C1;0.896614!10163-103B1;0.951117!10076-102A4;0.772926!10073-102A1;0.996784!10036-101E9;0.987625!10195-103E6;0.963433!10277-104E7;0.843243!10434-106E2;0.701972!10550-107I1;0.389618!10545-107H5;0.554388!10544-107H4;0.512642!10704-109H2;0.672544!10510-107D6;0.604577!10558-107I9;0.411976!10020-101D2;0.526731!10732-110B3;0.0377096!10049-101G4;0.208365!10698-109G5;0.142978!10437-106E5;0.722342!10417-106C3;0.43995!10035-101E8;0.28773!10171-103B9;0.942956!10157-103A4;0.935249!10034-101E7;0.811818!10072-101I9;0.962163!10199-103F1;0.991522!10200-103F2;0.00923195!10697-109G4;0.150826!10723-110A3;0.462523!10179-103C8;0.541205!10160-103A7;0.552266!10180-103C9;0.73349!10162-103A9;0.911963!10021-101D3;0.698777!10840-111E3;0.0146309!10706-109H4;0.0244262!10033-101E6;0.405174!10032-101E5;0.804949!10490-107B4;0.965228!10439-106E7;0.381754!10022-101D4;0.518804!10176-103C5;0.0448292!10469-106I1;0.948369!10067-101I4;0.678947!10411-106B6;0.147615!10471-106I3;0.791295!10030-101E3;0.530049!10475-106I7;0.183633!10787-110H4;0.0345347!10477-106I9;0.483031!10695-109G2;0.348411!11771-123I7;0.521784!11772-123I8;0.728197!11773-123I9;0.454112!10093-102C3;0.126804!10442-106F1;0.011335!10442-106F1;0.625471!10201-103F3;0.50238!10639-108I9;0.00916152!11843-124H7;0.330248!11841-124H5;0.717147!10693-109F9;0.462044!10436-106E4;0.802319!10483-107A6;0.925037!10282-104F3;0.33266!10023-101D5;0.523338!10066-101I3;0.284079!10065-101I2;0.128333!10800-110I8;0.0578743!10610-108F7;0.126383!10841-111E4;0.350546!10541-107H1;0.332599!10842-111E5;0.677067!10562-108A4;0.0959819!10024-101D6;0.629414!10064-101I1;0.0310516!10609-108F6;0.0961226!10048-101G3;0.130502!10781-110G7;0.0766994!10181-103D1;0.258841!10159-103A6;0.561733!10056-101H2;0.654617!10737-110B8;0.609871!10025-101D7;0.784932!10044-101F8;0.168737!10424-106D1;0.0998052!10463-106H4;0.0376327!10616-108G4;0.882319!10486-107A9;0.347861!10062-101H8;0.802076!10202-103F4;0.00746721!10158-103A5;0.03993!10441-106E9;0.634624!10031-101E4;0.441835!10063-101H9;0.892759!10063-101H9;0.915726!11763-123H8;0.101961!11765-123I1;0.486463!11768-123I4;0.296557!10807-111A6;0.385134!10790-110H7;0.337771!10798-110I6;0.259781!10786-110H3;0.524461!10591-108D6;0.457833!10593-108D8;0.428161!10590-108D5;0.571899!10026-101D8;0.283461!10096-102C6;0.0691263!10168-103B6;0.307921!10154-103A1;0.862348!10209-103G2;0.83745!10061-101H7;0.118823!10027-101D9;0.12365!10043-101F7;0.538252!10783-110G9;0.409033!10028-101E1;0.33534!10060-101H6;0.114042!10203-103F5;0.176265!10059-101H5;0.067806!10047-101G2;0.0421873!10029-101E2;0.0681299!10058-101H4;0.0343534!10418-106C4;0.0589737!10492-107B6;0.378772!10694-109G1;0.383288!10797-110I5;0.536683!10057-101H3;0.803834!10100-102D1;0.0697444!10055-101H1;0.063683!10204-103F6;0.0252946!10191-103E2;0.0489141!10563-108A5;0.215361
|name=motif_ACTGGN
|name=motif_ACTGGN
|tomtom_result=odd#MA0454.1;5;0.00733783;3.49281;1;6;ACTGGA;CTGCTACTGTT;-!Tcfcp2l1#MA0145.1;9;0.0101861;4.84856;1;5;ACTGGA;CTGGTTTGAACTGG;-!ACE2#MA0267.1;1;0.0128207;6.10265;1;6;ACTGGA;TGCTGGT;-
}}
}}

Latest revision as of 13:04, 7 September 2012

Full Name: motif_ACTGGN

Motif matrix
POACGT
0125920000
0202592000
0300025920
0400259200
0500259200
066480648064806480

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

odd#MA0454.150.007337833.4928116ACTGGACTGCTACTGTT-
Tcfcp2l1#MA0145.190.01018614.8485615ACTGGACTGGTTTGAACTGG-
ACE2#MA0267.110.01282076.1026516ACTGGATGCTGGT-