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MacroAPE 1083:SMAD3 f1: Difference between revisions

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631457!11440-118H9;0.000802751!11532-120A2;0.00454402!11693-123A1;0.36293!11292-117A5;0.113837!11369-118A1;0.166953!11441-118I1;0.201475!10007-101B4;0.387125!11520-119H8;0.000795176!11600-120H7;0.274675!11681-122H7;0.631674!11216-116B1;0.791539!12179-129A1;0.996194!12180-129A2;0.0194755!12181-129A3;0.0186148!12176-128I7;0.0228007!12177-128I8;0.0408054!12182-129A4;0.0393804!12183-129A5;0.0197148!12184-129A6;0.019266!10809-111A8;0.0243766!10597-108E3;0.000643123!10717-109I6;0.0253887!10455-106G5;0.00169738!10534-107G3;0.000478991!10429-106D6;0.000471413!10464-106H5;0.000308336!10827-111C8;1.20598e-05!10789-110H6;0.00216466!10828-111C9;0.0165328!10788-110H5;0.00466257!10792-110H9;2.92466e-05!10765-110E9;0.00166088!10829-111D1;0.000536681!10830-111D2;0.000398505!10831-111D3;0.000344693!10832-111D4;0.00043916!10833-111D5;0.000212753!10764-110E8;0.000557453!10770-110F5;5.81632e-06!10399-106A3;1.32056e-05!10400-106A4;8.13407e-06!10405-106A9;3.80674e-06!10834-111D6;1.32153e-05!10835-111D7;0.000652438!10836-111D8;0.00269608!10837-111D9;0.000435753!10699-109G6;0.0209014!10802-111A1;0.0179045!10796-110I4;0.000628317!10010-101C1;1.09336e-06!10810-111A9;0.00010585!10421-106C7;5.77703e-05!10708-109H6;0.000220352!12235-129G3;8.76758e-05!12236-129G4;0.0106975!12237-129G5;0.0284123!10167-103B5;0.174508!10151-102I7;0.327116!10428-106D5;0.319535!10795-110I3;0.622334!10805-111A4;5.53307e-05!10052-101G7;0.000609446!10189-103D9;0.00186081!10589-108D4;0.0112102!10425-106D2;0.00019529!10427-106D4;0.416994!10702-109G9;0.000499442!10432-106D9;7.32499e-05!10496-107C1;0.013297!10718-109I7;0.000311788!10011-101C2;1.0255e-05!10053-101G8;0.000482639!10686-109F2;0.0156615!10084-102B3;0.0164779!10012-101C3;0.37644!10085-102B4;0.187697!10482-107A5;0.107552!10419-106C5;0.000237926!10080-102A8;0.00211529!10760-110E4;0.00139912!10709-109H7;0.000357619!10710-109H8;0.000491221!10703-109H1;1.51472e-06!10719-109I8;0.024949!10642-109A3;0.0796745!10177-103C6;0.33586!10164-103B2;0.369168!10173-103C2;0.568284!10166-103B4;0.57389!10083-102B2;0.473508!10188-103D8;0.446696!10552-107I3;0.178109!10553-107I4;0.000250961!10013-101C4;0.00695059!10536-107G5;0.000228022!10618-108G6;0.00775243!10423-106C9;0.000820386!10785-110H2;0.0013452!12238-129G6;0.00302422!12239-129G7;0.000331032!12240-129G8;0.00051811!10416-106C2;0.000876771!10801-110I9;0.000196546!10766-110F1;0.00998507!10824-111C5;0.00206908!10825-111C6;0.00221371!10826-111C7;0.00204366!10454-106G4;0.00258875!10409-106B4;0.00394174!10638-108I8;0.00836373!10636-108I6;5.21738e-06!10513-107D9;0.00566666!10420-106C6;0.00317284!10082-102B1;0.00457573!10014-101C5;0.0685154!10070-101I7;0.0118187!10452-106G2;0.00550129!10453-106G3;0.000975775!10449-106F8;8.60208e-05!10042-101F6;0.000119148!10069-101I6;0.320844!10193-103E4;0.00390816!10631-108I1;0.539336!10438-106E6;0.00305049!10488-107B2;0.000780582!10196-103E7;0.00249692!10071-101I8;0.0283711!10071-101I8;0.039578!10041-101F5;0.0364225!10451-106G1;0.000567471!10450-106F9;0.000480911!10604-108F1;0.0105375!10605-108F2;0.0176845!10606-108F3;0.00344578!10603-108E9;0.0192781!10497-107C2;0.00352913!10448-106F7;0.00134155!10643-109A4;0.0821928!10426-106D3;0.049044!10431-106D8;0.00204384!10197-103E8;0.00141574!10443-106F2;0.00561536!10815-111B5;0.729735!10816-111B6;0.00276946!10817-111B7;0.0044354!10015-101C6;0.00338404!10410-106B5;0.00330004!10054-101G9;0.0201692!10758-110E2;0.00411072!10711-109H9;0.191617!10040-101F4;0.00282016!10470-106I2;0.357614!10415-106C1;0.00339672!10198-103E9;0.0243342!10614-108G2;0.00335462!10612-108F9;0.312274!10549-107H9;4.73903e-05!10615-108G3;0.00277754!10487-107B1;0.00355031!10433-106E1;0.000514862!10688-109F4;0.0596496!10444-106F3;0.00298759!10444-106F3;0.0914401!10485-107A8;0.0567757!10413-106B8;0.849943!10175-103C4;0.579072!10161-103A8;0.440628!12131-128D7;0.520635!10624-108H3;6.39366e-05!10712-109I1;0.0377692!10205-103F7;0.00191633!10206-103F8;0.000589142!10207-103F9;0.00304848!10050-101G5;0.009978!10051-101G6;0.0905123!10016-101C7;0.0268184!10046-101G1;0.00459708!10778-110G4;0.001012!10633-108I3;0.00177882!10818-111B8;1.11204e-05!10819-111B9;0.017466!10820-111C1;0.0163779!10484-107A7;0.0223227!10808-111A7;0.0123466!10169-103B7;0.000707337!10153-102I9;0.358791!13425-144D5;0.383439!13433-144E4;1.25287e-07!13437-144E8;4.8573e-07!11904-125F5;9.34263e-08!11905-125F6;0.0444608!10039-101F3;0.0622425!10791-110H8;0.291869!10017-101C8;0.000138743!10045-101F9;0.0139957!10509-107D5;0.00254521!10839-111E2;0.0657867!10692-109F8;0.000374042!10079-102A7;0.00709648!10078-102A6;0.00436062!10721-110A1;0.0403381!10569-108B2;0.0491735!10570-108B3;0.00401142!10571-108B4;0.00395295!10647-109A8;0.00138268!10752-110D5;0.204048!10782-110G8;0.00610048!10726-110A6;0.00837473!10018-101C9;0.132745!10086-102B5;0.654091!10182-103D2;0.868197!10165-103B3;0.215498!10499-107C4;0.267888!10408-106B3;0.00109298!10019-101D1;0.0124218!10068-101I5;0.00476431!10075-102A3;0.000332815!10077-102A5;0.0446005!10727-110A7;0.372092!10775-110G1;0.000352508!10412-106B7;0.00265973!12231-129F8;0.0495514!12232-129F9;0.00109135!12233-129G1;0.000132763!12234-129G2;0.000203107!10414-106B9;0.000105927!10170-103B8;0.00033855!10183-103D3;0.425595!10150-102I6;0.391429!10174-103C3;0.39943!10155-103A2;0.0756837!10038-101F2;0.191078!10838-111E1;0.0943376!10759-110E3;0.0346528!10514-107E1;0.071343!10465-106H6;0.00239359!10691-109F7;0.00254124!10843-111E6;0.0682007!10844-111E7;0.0333757!11747-123G1;0.312917!11748-123G2;0.0378096!11749-123G3;0.0108379!11750-123G4;0.00768055!11751-123G5;0.00377686!11840-124H4;0.00233291!11752-123G6;0.00192167!11753-123G7;0.0918974!11754-123G8;0.00610306!11755-123G9;0.00556108!11756-123H1;0.057511!11833-124G6;0.0313701!11760-123H5;0.0495504!11836-124G9;0.00794901!11758-123H3;0.00400809!11835-124G8;0.0051481!11762-123H7;0.000831012!11838-124H2;0.0426115!11757-123H2;0.00144881!11759-123H4;0.007757!11761-123H6;0.021621!11842-124H6;0.0229735!11837-124H1;0.00159717!10568-108B1;0.000111562!13230-141I8;0.0015189!13231-141I9;4.63692e-05!10696-109G3;3.04717e-05!10493-107B7;0.00385022!10494-107B8;0.0277729!10850-111F4;0.245601!10851-111F5;0.00726046!10852-111F6;0.981423!10853-111F7;0.911486!10854-111F8;0.0212537!10855-111F9;0.409465!10856-111G1;0.142339!10847-111F1;0.17311!10846-111E9;0.266268!10848-111F2;0.0677435!10845-111E8;0.0034!10857-111G2;1.54608e-05!10858-111G3;0.17887!10156-103A3;0.0204964!11901-125F2;0.408233!11902-125F3;0.0299562!11903-125F4;0.00123708!10689-109F5;0.00141526!10648-109A9;0.0381378!10784-110H1;0.203237!10744-110C6;0.000679553!10772-110F7;0.00530325!10474-106I6;0.00164712!10600-108E6;9.77807e-05!10684-109E9;0.809657!12226-129F3;0.321995!12227-129F4;0.0174686!10508-107D4;0.0147024!10539-107G8;0.798951!10607-108F4;0.757872!10555-107I6;0.0205903!10774-110F9;0.955048!10637-108I7;0.0138448!10663-109C6;0.489096!10728-110A8;0.180063!10729-110A9;0.0356534!10430-106D7;0.000374176!10730-110B1;0.000423284!10813-111B3;0.168258!10812-111B2;0.0131665!10037-101F1;0.00668146!10172-103C1;0.318586!10163-103B1;0.375068!10076-102A4;0.404979!10073-102A1;0.390978!10036-101E9;0.066084!10195-103E6;0.308779!10277-104E7;0.2613!10434-106E2;0.35855!10550-107I1;1.27245e-05!10545-107H5;0.000198834!10544-107H4;0.00168458!10704-109H2;0.000946585!10510-107D6;0.000236036!10558-107I9;0.262767!10020-101D2;0.168432!10732-110B3;0.000630394!10049-101G4;0.296982!10698-109G5;0.17508!10437-106E5;0.00247575!10417-106C3;0.0129828!10035-101E8;0.139446!10171-103B9;0.365617!10157-103A4;0.56024!10034-101E7;0.360049!10072-101I9;0.3542!10199-103F1;0.0662649!10200-103F2;0.0460335!10697-109G4;0.0109465!10723-110A3;0.935713!10179-103C8;0.0652471!10160-103A7;0.377184!10180-103C9;0.431784!10162-103A9;0.259965!10021-101D3;0.290959!10840-111E3;0.00178091!10706-109H4;0.000226888!10033-101E6;0.211982!10032-101E5;0.251011!10490-107B4;0.349689!10439-106E7;1.7612e-05!10022-101D4;0.0110266!10176-103C5;0.00077994!10469-106I1;0.626884!10067-101I4;0.00902874!10411-106B6;0.00532847!10471-106I3;0.349636!10030-101E3;0.178202!10475-106I7;0.0176787!10787-110H4;0.00165366!10477-106I9;0.000531918!10695-109G2;0.967477!11771-123I7;0.0638129!11772-123I8;0.622!11773-123I9;0.0717392!10093-102C3;0.267547!10442-106F1;0.186511!10442-106F1;0.190479!10201-103F3;0.399364!10639-108I9;0.0150909!11843-124H7;0.116764!11841-124H5;0.171012!10693-109F9;0.146379!10436-106E4;0.000162321!10483-107A6;0.000703304!10282-104F3;3.8878e-06!10023-101D5;0.349589!10066-101I3;0.0197064!10065-101I2;0.00126887!10800-110I8;0.00128285!10610-108F7;0.0146547!10841-111E4;0.00452707!10541-107H1;6.45753e-06!10842-111E5;0.000501024!10562-108A4;0.00913847!10024-101D6;0.0886165!10064-101I1;0.184681!10609-108F6;0.0339353!10048-101G3;3.15296e-07!10781-110G7;0.00592022!10181-103D1;0.00368678!10159-103A6;0.0834241!10056-101H2;0.243268!10737-110B8;0.0158853!10025-101D7;0.00277691!10044-101F8;0.0515316!10424-106D1;0.0114733!10463-106H4;7.69095e-05!10616-108G4;0.000262893!10486-107A9;0.00700742!10062-101H8;0.0006884!10202-103F4;0.130185!10158-103A5;0.0281451!10441-106E9;0.347681!10031-101E4;0.165503!10063-101H9;0.269389!10063-101H9;0.0714059!11763-123H8;0.0113492!11765-123I1;0.00109743!11768-123I4;0.000163928!10807-111A6;0.00065666!10790-110H7;0.000316747!10798-110I6;0.00305479!10786-110H3;0.95539!10591-108D6;0.000169295!10593-108D8;7.68053e-06!10590-108D5;0.00799105!10026-101D8;2.85398e-07!10096-102C6;0.0259314!10168-103B6;0.130252!10154-103A1;0.251829!10209-103G2;0.427001!10061-101H7;0.0108805!10027-101D9;0.0029788!10043-101F7;0.484922!10783-110G9;0.357145!10028-101E1;0.330696!10060-101H6;0.00345206!10203-103F5;0.0311075!10059-101H5;0.0227234!10047-101G2;0.0106659!10029-101E2;0.127297!10058-101H4;0.00553509!10418-106C4;0.002051!10492-107B6;0.106733!10694-109G1;0.000595295!10797-110I5;0.51121!10057-101H3;0.00830364!10100-102D1;0.00981652!10055-101H1;0.00294009!10204-103F6;0.00116309!10191-103E2;0.00614062!10563-108A5;0.00435124
|name=SMAD3_f1
|name=SMAD3_f1
|tomtom_result=Hand1::Tcfe2a#MA0092.1;-1;0.000493867;0.235081;0.470162;9;GTGTCTGGCC;GGTCTGGCAT;+!ARG80#MA0271.1;0;0.00847242;4.03287;1;6;GTGTCTGGCC;GCGTCT;-!CRZ1#MA0285.1;0;0.0139558;6.64295;1;9;GTGTCTGGCC;GTGGCTTAG;-!fkh#MA0446.1;-1;0.0150515;7.16453;1;9;GTGTCTGGCC;TGTTTGCTTAA;+!NDT80#MA0343.1;10;0.0159514;7.59288;1;10;GTGTCTGGCC;TTGCGTTTTTGTGGCCGGAAA;-
}}
}}

Latest revision as of 12:39, 7 September 2012

Full Name: SMAD3_f1

Motif matrix
POACGT
113.17200674536254817.97301854974709231.63743676222601310.217537942664446
215.7571669477234788.8634064080944527.01686340640810541.36256323777408
30.98482293423271286.64755480607083263.397976391231091.969645868465433
40.00.07.13996627318719265.86003372681289
50.072.015177065767350.00.9848229342327128
63.4468802698145061.84654300168634670.984822934232712866.7217537942665
77.6323777403035880.060.566610455312044.801011804384492
87.50927487352445815.3878583473861632.0067453625633318.09612141652615
916.24957841483977840.1315345699831510.3406408094435036.278246205733565
107.13996627318719228.8060708263069711.94097807757168525.11298482293423

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Hand1::Tcfe2a#MA0092.1-10.0004938670.2350810.4701629GTGTCTGGCCGGTCTGGCAT+
ARG80#MA0271.100.008472424.0328716GTGTCTGGCCGCGTCT-
CRZ1#MA0285.100.01395586.6429519GTGTCTGGCCGTGGCTTAG-
fkh#MA0446.1-10.01505157.1645319GTGTCTGGCCTGTTTGCTTAA+
NDT80#MA0343.1100.01595147.59288110GTGTCTGGCCTTGCGTTTTTGTGGCCGGAAA-
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