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MacroAPE 1083:CNhs13460 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;21.731064280886972;83.40709368595876;1.1160673690388612;27.18193091269306!2;81.91627225962182;3.85332315675676;23.62179292671115;24.04476790...")
 
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G3;0.193007!10429-106D6;0.0118229!10464-106H5;0.801763!10827-111C8;0.0149035!10789-110H6;0.101037!10828-111C9;0.342225!10788-110H5;0.191035!10792-110H9;0.199851!10765-110E9;0.129619!10829-111D1;0.289896!10830-111D2;0.0857418!10831-111D3;0.0356851!10832-111D4;0.0347979!10833-111D5;0.291993!10764-110E8;0.201761!10770-110F5;0.0068615!10399-106A3;0.00237072!10400-106A4;0.00994134!10405-106A9;0.00749853!10834-111D6;0.0212796!10835-111D7;0.00433942!10836-111D8;0.642491!10837-111D9;0.00158188!10699-109G6;0.00331629!10802-111A1;0.31069!10796-110I4;0.00691601!10010-101C1;0.0528227!10810-111A9;0.423575!10421-106C7;0.321345!10708-109H6;0.828641!12235-129G3;0.63757!12236-129G4;0.0456943!12237-129G5;0.797431!10167-103B5;0.0574981!10151-102I7;0.699541!10428-106D5;0.863366!10795-110I3;0.272989!10805-111A4;0.300243!10052-101G7;0.202325!10189-103D9;0.141837!10589-108D4;0.986266!10425-106D2;0.228234!10427-106D4;0.237925!10702-109G9;0.197867!10432-106D9;0.144891!10496-107C1;0.455783!10718-109I7;0.0720546!10011-101C2;0.117106!10053-101G8;0.849032!10686-109F2;0.877843!10084-102B3;0.3008!10012-101C3;0.738076!10085-102B4;0.757023!10482-107A5;0.593236!10419-106C5;0.732323!10080-102A8;0.265109!10760-110E4;0.623392!10709-109H7;0.0370336!10710-109H8;0.342917!10703-109H1;0.138385!10719-109I8;0.00408553!10642-109A3;0.707332!10177-103C6;0.0364641!10164-103B2;0.843851!10173-103C2;0.907545!10166-103B4;0.367902!10083-102B2;0.529422!10188-103D8;0.341281!10552-107I3;0.798641!10553-107I4;0.0119608!10013-101C4;0.318391!10536-107G5;0.630072!10618-108G6;0.463983!10423-106C9;0.0413455!10785-110H2;0.0121637!12238-129G6;0.0114251!12239-129G7;0.378052!12240-129G8;0.64208!10416-106C2;0.909076!10801-110I9;0.124728!10766-110F1;0.838752!10824-111C5;0.183842!10825-111C6;0.105983!10826-111C7;0.0912979!10454-106G4;0.169261!10409-106B4;0.0255062!10638-108I8;0.273965!10636-108I6;0.0274354!10513-107D9;0.0951826!10420-106C6;0.143446!10082-102B1;0.0731479!10014-101C5;0.227185!10070-101I7;0.772551!10452-106G2;0.411946!10453-106G3;0.833645!10449-106F8;0.228714!10042-101F6;0.153791!10069-101I6;0.851933!10193-103E4;0.0702036!10631-108I1;0.750889!10438-106E6;0.118381!10488-107B2;0.819374!10196-103E7;0.164794!10071-101I8;0.308075!10071-101I8;0.63647!10041-101F5;0.42248!10451-106G1;0.218687!10450-106F9;0.00810857!10604-108F1;0.00220519!10605-108F2;0.833734!10606-108F3;0.479319!10603-108E9;0.961416!10497-107C2;0.516188!10448-106F7;0.00518281!10643-109A4;0.924204!10426-106D3;0.217777!10431-106D8;0.632166!10197-103E8;0.236818!10443-106F2;0.773514!10815-111B5;0.901663!10816-111B6;0.0251291!10817-111B7;0.0328545!10015-101C6;0.0328291!10410-106B5;0.425786!10054-101G9;0.350949!10758-110E2;0.686519!10711-109H9;0.0139602!10040-101F4;0.0173539!10470-106I2;0.782604!10415-106C1;0.0962779!10198-103E9;0.152952!10614-108G2;0.886522!10612-108F9;0.322956!10549-107H9;0.180677!10615-108G3;0.0183953!10487-107B1;0.678176!10433-106E1;0.490135!10688-109F4;0.421237!10444-106F3;0.528387!10444-106F3;0.350138!10485-107A8;0.472348!10413-106B8;0.0960907!10175-103C4;0.528413!10161-103A8;0.545328!12131-128D7;0.581034!10624-108H3;0.946258!10712-109I1;0.309381!10205-103F7;0.648702!10206-103F8;0.36167!10207-103F9;0.62423!10050-101G5;0.522692!10051-101G6;0.92977!10016-101C7;0.439756!10046-101G1;0.720543!10778-110G4;0.570696!10633-108I3;0.00441179!10818-111B8;0.197084!10819-111B9;0.0170545!10820-111C1;0.0270105!10484-107A7;0.0160849!10808-111A7;0.146251!10169-103B7;0.064024!10153-102I9;0.651245!13425-144D5;0.962375!13433-144E4;0.288652!13437-144E8;0.280048!11904-125F5;0.28406!11905-125F6;0.0715255!10039-101F3;0.00825399!10791-110H8;0.730741!10017-101C8;0.199527!10045-101F9;0.216893!10509-107D5;0.497962!10839-111E2;0.635263!10692-109F8;0.210537!10079-102A7;0.677765!10078-102A6;0.78811!10721-110A1;0.908998!10569-108B2;0.830626!10570-108B3;0.191777!10571-108B4;0.520488!10647-109A8;0.110201!10752-110D5;0.80612!10782-110G8;0.150263!10726-110A6;0.540075!10018-101C9;0.35327!10086-102B5;0.650924!10182-103D2;0.2478!10165-103B3;0.641933!10499-107C4;0.736516!10408-106B3;0.0108504!10019-101D1;0.687259!10068-101I5;0.221502!10075-102A3;0.418456!10077-102A5;0.536834!10727-110A7;0.572295!10775-110G1;0.84707!10412-106B7;0.122939!12231-129F8;0.849337!12232-129F9;0.09545!12233-129G1;0.207798!12234-129G2;0.207204!10414-106B9;0.221866!10170-103B8;0.079014!10183-103D3;0.610228!10150-102I6;0.665704!10174-103C3;0.75943!10155-103A2;0.914526!10038-101F2;0.978387!10838-111E1;0.902874!10759-110E3;0.159647!10514-107E1;0.307048!10465-106H6;0.632581!10691-109F7;0.248615!10843-111E6;0.679448!10844-111E7;0.0668088!11747-123G1;0.0926241!11748-123G2;0.112835!11749-123G3;0.0328988!11750-123G4;0.0437563!11751-123G5;0.00832588!11840-124H4;0.0296371!11752-123G6;0.0416185!11753-123G7;0.0744996!11754-123G8;0.00278338!11755-123G9;0.00936331!11756-123H1;0.487738!11833-124G6;0.103046!11760-123H5;0.432966!11836-124G9;0.127691!11758-123H3;0.0886449!11835-124G8;0.197607!11762-123H7;0.0199912!11838-124H2;0.0424378!11757-123H2;0.249415!11759-123H4;0.438392!11761-123H6;0.0161699!11842-124H6;0.158737!11837-124H1;0.0166456!10568-108B1;0.006305!13230-141I8;0.744807!13231-141I9;0.0711758!10696-109G3;0.125885!10493-107B7;0.222841!10494-107B8;0.189855!10850-111F4;0.465097!10851-111F5;0.053306!10852-111F6;0.738908!10853-111F7;0.827913!10854-111F8;0.665722!10855-111F9;0.990548!10856-111G1;0.648571!10847-111F1;0.890585!10846-111E9;0.310023!10848-111F2;0.678784!10845-111E8;0.168522!10857-111G2;0.0150884!10858-111G3;0.0913558!10156-103A3;0.367593!11901-125F2;0.781313!11902-125F3;0.621916!11903-125F4;0.581721!10689-109F5;0.985696!10648-109A9;0.28783!10784-110H1;0.199102!10744-110C6;0.577997!10772-110F7;0.817375!10474-106I6;0.0013093!10600-108E6;0.104522!10684-109E9;0.635524!12226-129F3;0.29454!12227-129F4;0.329563!10508-107D4;0.787682!10539-107G8;0.0461899!10607-108F4;0.0832611!10555-107I6;0.367214!10774-110F9;0.211242!10637-108I7;0.163663!10663-109C6;0.724987!10728-110A8;0.900969!10729-110A9;0.655631!10430-106D7;0.0152934!10730-110B1;0.172736!10813-111B3;0.23943!10812-111B2;5.31006e-05!10037-101F1;0.465525!10172-103C1;0.890029!10163-103B1;0.637262!10076-102A4;0.690091!10073-102A1;0.609897!10036-101E9;0.512977!10195-103E6;0.718034!10277-104E7;0.764181!10434-106E2;0.525725!10550-107I1;0.280771!10545-107H5;0.375512!10544-107H4;0.755825!10704-109H2;0.414661!10510-107D6;0.000683519!10558-107I9;0.581773!10020-101D2;0.129493!10732-110B3;0.404446!10049-101G4;0.420211!10698-109G5;0.272649!10437-106E5;0.0237!10417-106C3;0.79564!10035-101E8;0.0927764!10171-103B9;0.671589!10157-103A4;0.686446!10034-101E7;0.789732!10072-101I9;0.759063!10199-103F1;0.384365!10200-103F2;0.537245!10697-109G4;0.62932!10723-110A3;0.0203646!10179-103C8;0.320928!10160-103A7;0.653245!10180-103C9;0.69112!10162-103A9;0.968447!10021-101D3;0.58402!10840-111E3;0.452839!10706-109H4;0.195645!10033-101E6;0.202316!10032-101E5;0.570733!10490-107B4;0.766334!10439-106E7;0.0515475!10022-101D4;0.170995!10176-103C5;0.732657!10469-106I1;0.908928!10067-101I4;0.160481!10411-106B6;0.217992!10471-106I3;0.0429266!10030-101E3;0.160256!10475-106I7;0.70446!10787-110H4;0.00537948!10477-106I9;0.0387945!10695-109G2;0.373114!11771-123I7;0.0808047!11772-123I8;0.82585!11773-123I9;0.641787!10093-102C3;0.389689!10442-106F1;0.488426!10442-106F1;0.699344!10201-103F3;0.609878!10639-108I9;0.421653!11843-124H7;0.331124!11841-124H5;0.229877!10693-109F9;0.0719432!10436-106E4;0.345199!10483-107A6;0.177221!10282-104F3;0.258795!10023-101D5;0.928823!10066-101I3;0.184372!10065-101I2;0.589843!10800-110I8;0.674311!10610-108F7;0.576251!10841-111E4;0.133073!10541-107H1;0.00392253!10842-111E5;0.112138!10562-108A4;0.0325788!10024-101D6;0.293514!10064-101I1;0.726063!10609-108F6;0.199391!10048-101G3;0.588283!10781-110G7;0.948224!10181-103D1;0.299345!10159-103A6;0.535672!10056-101H2;0.74149!10737-110B8;0.792694!10025-101D7;0.0135429!10044-101F8;0.901293!10424-106D1;0.621387!10463-106H4;0.445041!10616-108G4;0.458399!10486-107A9;0.235752!10062-101H8;0.828507!10202-103F4;0.378609!10158-103A5;0.943964!10441-106E9;0.99412!10031-101E4;0.0150431!10063-101H9;0.869731!10063-101H9;0.365125!11763-123H8;0.294821!11765-123I1;0.00521241!11768-123I4;0.0033796!10807-111A6;0.0192535!10790-110H7;0.248078!10798-110I6;0.116643!10786-110H3;0.876208!10591-108D6;0.745637!10593-108D8;0.220695!10590-108D5;0.994919!10026-101D8;0.51244!10096-102C6;0.683207!10168-103B6;0.650837!10154-103A1;0.753009!10209-103G2;0.995266!10061-101H7;0.376942!10027-101D9;0.340537!10043-101F7;0.802372!10783-110G9;0.723125!10028-101E1;0.269799!10060-101H6;0.506772!10203-103F5;0.509068!10059-101H5;0.267648!10047-101G2;0.239751!10029-101E2;0.658852!10058-101H4;0.19689!10418-106C4;0.19896!10492-107B6;0.0529906!10694-109G1;0.798655!10797-110I5;0.167099!10057-101H3;0.812647!10100-102D1;0.30816!10055-101H1;0.916214!10204-103F6;0.754024!10191-103E2;0.920449!10563-108A5;0.714076
|name=CNhs13460_bu_f2
|name=CNhs13460_bu_f2
|tomtom_result=NFATC2#MA0152.1;-2;0.000141296;0.0672571;0.134196;7;CATGGAAAAAGC;TGGAAAA;-!dl_1#MA0022.1;-2;0.00131853;0.627621;0.571358;10;CATGGAAAAAGC;CGGAAAAACCCC;-!HSF1#MA0319.1;-1;0.00258292;1.22947;0.571358;8;CATGGAAAAAGC;ATGGAACA;+!HMRA2#MA0318.1;0;0.00274629;1.30724;0.571358;8;CATGGAAAAAGC;CATGTAAT;+!HMG-I/Y#MA0045.1;5;0.00345541;1.64477;0.571358;11;CATGGAAAAAGC;CAACAAATGGAAAAAC;+!FOXO3#MA0157.1;-2;0.00393253;1.87188;0.571358;8;CATGGAAAAAGC;TGTAAACA;+!EDS1#MA0294.1;-2;0.00421112;2.00449;0.571358;9;CATGGAAAAAGC;CGGAAAAAT;+!Spz1#MA0111.1;-1;0.00543032;2.58483;0.64468;11;CATGGAAAAAGC;AGGGTAACAGC;+!slp1#MA0458.1;0;0.00736027;3.50349;0.734727;11;CATGGAAAAAGC;AATGTAAACAA;-!RGT1#MA0367.1;-1;0.00773602;3.68234;0.734727;11;CATGGAAAAAGC;CCGGAAAAACT;-!Foxa2#MA0047.2;2;0.012025;5.72392;0.963054;10;CATGGAAAAAGC;CCTAAGTAAACA;-!FOXA1#MA0148.1;1;0.0144387;6.87282;0.963054;10;CATGGAAAAAGC;CAAAGTAAACA;-!ELF5#MA0136.1;-1;0.0156187;7.43451;0.963054;9;CATGGAAAAAGC;AAGGAAGTA;-!STE12#MA0393.1;-3;0.0173864;8.27595;0.963054;7;CATGGAAAAAGC;TGAAACA;+!ETS1#MA0098.1;-2;0.0177761;8.46144;0.963054;6;CATGGAAAAAGC;CGGAAA;-!CEP3#MA0282.1;0;0.018949;9.01973;0.963054;8;CATGGAAAAAGC;CTCGGAAA;+!squamosa#MA0082.1;5;0.0198221;9.4353;0.963054;9;CATGGAAAAAGC;CCAAAAATGGAAAT;+!Su(H)#MA0085.1;1;0.0198336;9.44078;0.963054;12;CATGGAAAAAGC;CTGTGGGAAACGAGAT;+!dl_2#MA0023.1;-3;0.020239;9.63375;0.963054;9;CATGGAAAAAGC;GGAAAACCCC;-!SFL1#MA0377.1;5;0.0202985;9.66211;0.963054;12;CATGGAAAAAGC;TAGAGAATAGAAGAAATAAAA;+
}}
}}

Latest revision as of 14:09, 7 September 2012

Full Name: CNhs13460_bu_f2

Motif matrix
POACGT
121.73106428088697283.407093685958761.116067369038861227.18193091269306
281.916272259621823.8533231567567623.6217929267111524.044767905487884
32.03441496314228281.4243572938892810.27772939437298566129.6996545971731
43.83207943840599260.0106.1574162779110423.446660532260623
50.00.0133.3146254363440.12153081223369012
6133.436156248577670.00.00.0
7122.7295533514128910.7066028971647250.00.0
8118.927084067635890.228743790320448560.2287437903204485614.051584600300819
966.2521179199426958.6707015328347340.228743790320448568.284593005479786
10119.5793347964617413.0604438433946070.228743790320448560.5676338184008263
118.30987345623558644.7768188734779777.157227184092243.1922367347718588
1224.30736766591858472.147026236285880.711013221266990336.2707491251062

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFATC2#MA0152.1-20.0001412960.06725710.1341967CATGGAAAAAGCTGGAAAA-
dl_1#MA0022.1-20.001318530.6276210.57135810CATGGAAAAAGCCGGAAAAACCCC-
HSF1#MA0319.1-10.002582921.229470.5713588CATGGAAAAAGCATGGAACA+
HMRA2#MA0318.100.002746291.307240.5713588CATGGAAAAAGCCATGTAAT+
HMG-I/Y#MA0045.150.003455411.644770.57135811CATGGAAAAAGCCAACAAATGGAAAAAC+
FOXO3#MA0157.1-20.003932531.871880.5713588CATGGAAAAAGCTGTAAACA+
EDS1#MA0294.1-20.004211122.004490.5713589CATGGAAAAAGCCGGAAAAAT+
Spz1#MA0111.1-10.005430322.584830.6446811CATGGAAAAAGCAGGGTAACAGC+
slp1#MA0458.100.007360273.503490.73472711CATGGAAAAAGCAATGTAAACAA-
RGT1#MA0367.1-10.007736023.682340.73472711CATGGAAAAAGCCCGGAAAAACT-
Foxa2#MA0047.220.0120255.723920.96305410CATGGAAAAAGCCCTAAGTAAACA-
FOXA1#MA0148.110.01443876.872820.96305410CATGGAAAAAGCCAAAGTAAACA-
ELF5#MA0136.1-10.01561877.434510.9630549CATGGAAAAAGCAAGGAAGTA-
STE12#MA0393.1-30.01738648.275950.9630547CATGGAAAAAGCTGAAACA+
ETS1#MA0098.1-20.01777618.461440.9630546CATGGAAAAAGCCGGAAA-
CEP3#MA0282.100.0189499.019730.9630548CATGGAAAAAGCCTCGGAAA+
squamosa#MA0082.150.01982219.43530.9630549CATGGAAAAAGCCCAAAAATGGAAAT+
Su(H)#MA0085.110.01983369.440780.96305412CATGGAAAAAGCCTGTGGGAAACGAGAT+
dl_2#MA0023.1-30.0202399.633750.9630549CATGGAAAAAGCGGAAAACCCC-
SFL1#MA0377.150.02029859.662110.96305412CATGGAAAAAGCTAGAGAATAGAAGAAATAAAA+
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