MacroAPE 1083:CGGCTTAAA,motif768: Difference between revisions
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(Created page with "{{Macroape_1083
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110H6;0.257507!10828-111C9;0.129244!10788-110H5;0.0470614!10792-110H9;0.25145!10765-110E9;0.226087!10829-111D1;0.280673!10830-111D2;0.225688!10831-111D3;0.0788462!10832-111D4;0.431335!10833-111D5;0.418606!10764-110E8;0.530656!10770-110F5;0.411647!10399-106A3;0.203031!10400-106A4;0.631168!10405-106A9;0.475687!10834-111D6;0.627515!10835-111D7;0.695994!10836-111D8;0.393502!10837-111D9;0.645813!10699-109G6;0.190772!10802-111A1;0.303279!10796-110I4;0.296707!10010-101C1;0.589745!10810-111A9;0.786856!10421-106C7;0.908799!10708-109H6;0.464263!12235-129G3;0.0481615!12236-129G4;0.0937396!12237-129G5;0.591204!10167-103B5;0.167514!10151-102I7;0.323004!10428-106D5;0.280539!10795-110I3;0.231194!10805-111A4;0.838425!10052-101G7;0.828536!10189-103D9;0.946607!10589-108D4;0.26544!10425-106D2;0.807503!10427-106D4;0.627702!10702-109G9;0.303272!10432-106D9;0.52987!10496-107C1;0.173372!10718-109I7;0.820409!10011-101C2;0.518179!10053-101G8;0.941138!10686-109F2;0.391487!10084-102B3;0.249176!10012-101C3;0.253777!10085-102B4;0.360005!10482-107A5;0.064301!10419-106C5;0.277134!10080-102A8;0.819176!10760-110E4;0.775888!10709-109H7;0.70569!10710-109H8;0.174696!10703-109H1;0.815346!10719-109I8;0.881834!10642-109A3;0.308569!10177-103C6;0.37915!10164-103B2;0.509583!10173-103C2;0.25451!10166-103B4;0.392068!10083-102B2;0.416373!10188-103D8;0.233422!10552-107I3;0.214643!10553-107I4;0.429029!10013-101C4;0.274515!10536-107G5;0.848115!10618-108G6;0.795674!10423-106C9;0.757079!10785-110H2;0.851591!12238-129G6;0.972318!12239-129G7;0.0719505!12240-129G8;0.394022!10416-106C2;0.159987!10801-110I9;0.190263!10766-110F1;0.776048!10824-111C5;0.4134!10825-111C6;0.571603!10826-111C7;0.620906!10454-106G4;0.642507!10409-106B4;0.447239!10638-108I8;0.496726!10636-108I6;0.823191!10513-107D9;0.810175!10420-106C6;0.91916!10082-102B1;0.390999!10014-101C5;0.811119!10070-101I7;0.550628!10452-106G2;0.38403!10453-106G3;0.995992!10449-106F8;0.898319!10042-101F6;0.846989!10069-101I6;0.487345!10193-103E4;0.943711!10631-108I1;0.343776!10438-106E6;0.306035!10488-107B2;0.99486!10196-103E7;0.510633!10071-101I8;0.725911!10071-101I8;0.472389!10041-101F5;0.361581!10451-106G1;0.923411!10450-106F9;0.888649!10604-108F1;0.739498!10605-108F2;0.586291!10606-108F3;0.540668!10603-108E9;0.561332!10497-107C2;0.936644!10448-106F7;0.66578!10643-109A4;0.468217!10426-106D3;0.827542!10431-106D8;0.67595!10197-103E8;0.383251!10443-106F2;0.606393!10815-111B5;0.741646!10816-111B6;0.806939!10817-111B7;0.936107!10015-101C6;0.870317!10410-106B5;0.870479!10054-101G9;0.742839!10758-110E2;0.364285!10711-109H9;0.866613!10040-101F4;0.464127!10470-106I2;0.473881!10415-106C1;0.395756!10198-103E9;0.803554!10614-108G2;0.711083!10612-108F9;0.5544!10549-107H9;0.772726!10615-108G3;0.282822!10487-107B1;0.639746!10433-106E1;0.670417!10688-109F4;0.595123!10444-106F3;0.87422!10444-106F3;0.393454!10485-107A8;0.473137!10413-106B8;0.364088!10175-103C4;0.776666!10161-103A8;0.305005!12131-128D7;0.419753!10624-108H3;0.733112!10712-109I1;0.605585!10205-103F7;0.838867!10206-103F8;0.943521!10207-103F9;0.773614!10050-101G5;0.774367!10051-101G6;0.690221!10016-101C7;0.862441!10046-101G1;0.699427!10778-110G4;0.666556!10633-108I3;0.667773!10818-111B8;0.435957!10819-111B9;0.77794!10820-111C1;0.821172!10484-107A7;0.789138!10808-111A7;0.886887!10169-103B7;0.364062!10153-102I9;0.386133!13425-144D5;0.291008!13433-144E4;0.270943!13437-144E8;0.282209!11904-125F5;0.255816!11905-125F6;0.298807!10039-101F3;0.799684!10791-110H8;0.373689!10017-101C8;0.717254!10045-101F9;0.318671!10509-107D5;0.646086!10839-111E2;0.128841!10692-109F8;0.894788!10079-102A7;0.362445!10078-102A6;0.8001!10721-110A1;0.802447!10569-108B2;0.969278!10570-108B3;0.611243!10571-108B4;0.684746!10647-109A8;0.876234!10752-110D5;0.412887!10782-110G8;0.663621!10726-110A6;0.558188!10018-101C9;0.623432!10086-102B5;0.475654!10182-103D2;0.658017!10165-103B3;0.349525!10499-107C4;0.365146!10408-106B3;0.831334!10019-101D1;0.449992!10068-101I5;0.967516!10075-102A3;0.945896!10077-102A5;0.884245!10727-110A7;0.543444!10775-110G1;0.745274!10412-106B7;0.362935!12231-129F8;0.869938!12232-129F9;0.72182!12233-129G1;0.529577!12234-129G2;0.382961!10414-106B9;0.264965!10170-103B8;0.756591!10183-103D3;0.422825!10150-102I6;0.362693!10174-103C3;0.377942!10155-103A2;0.333004!10038-101F2;0.431295!10838-111E1;0.450822!10759-110E3;0.162811!10514-107E1;0.767036!10465-106H6;0.22902!10691-109F7;0.256768!10843-111E6;0.864098!10844-111E7;0.957832!11747-123G1;0.718228!11748-123G2;0.200826!11749-123G3;0.40412!11750-123G4;0.186333!11751-123G5;0.400738!11840-124H4;0.714342!11752-123G6;0.70209!11753-123G7;0.270481!11754-123G8;0.520201!11755-123G9;0.624818!11756-123H1;0.82195!11833-124G6;0.845248!11760-123H5;0.711984!11836-124G9;0.609183!11758-123H3;0.618533!11835-124G8;0.783788!11762-123H7;0.45266!11838-124H2;0.915609!11757-123H2;0.725059!11759-123H4;0.726601!11761-123H6;0.729884!11842-124H6;0.985735!11837-124H1;0.763911!10568-108B1;0.791002!13230-141I8;0.538658!13231-141I9;0.501792!10696-109G3;0.883!10493-107B7;0.90988!10494-107B8;0.516315!10850-111F4;0.591439!10851-111F5;0.994817!10852-111F6;0.263973!10853-111F7;0.420988!10854-111F8;0.591913!10855-111F9;0.69014!10856-111G1;0.75663!10847-111F1;0.734093!10846-111E9;0.673971!10848-111F2;0.836734!10845-111E8;0.404493!10857-111G2;0.907197!10858-111G3;0.728813!10156-103A3;0.744675!11901-125F2;0.379197!11902-125F3;0.181115!11903-125F4;0.142809!10689-109F5;0.0481747!10648-109A9;0.526468!10784-110H1;0.170212!10744-110C6;0.194244!10772-110F7;0.960851!10474-106I6;0.309345!10600-108E6;0.01236!10684-109E9;0.689493!12226-129F3;0.199039!12227-129F4;0.61666!10508-107D4;0.27358!10539-107G8;0.66018!10607-108F4;0.635417!10555-107I6;0.774257!10774-110F9;0.724029!10637-108I7;0.684825!10663-109C6;0.821824!10728-110A8;0.224766!10729-110A9;0.403222!10430-106D7;0.81342!10730-110B1;0.316877!10813-111B3;0.629407!10812-111B2;0.770811!10037-101F1;0.763482!10172-103C1;0.382582!10163-103B1;0.335676!10076-102A4;0.325054!10073-102A1;0.267101!10036-101E9;0.399849!10195-103E6;0.270469!10277-104E7;0.40195!10434-106E2;0.630948!10550-107I1;0.975134!10545-107H5;0.626579!10544-107H4;0.441059!10704-109H2;0.392727!10510-107D6;0.949025!10558-107I9;0.0496811!10020-101D2;0.257272!10732-110B3;0.88505!10049-101G4;0.628549!10698-109G5;0.460217!10437-106E5;0.463481!10417-106C3;0.59692!10035-101E8;0.541885!10171-103B9;0.388865!10157-103A4;0.386293!10034-101E7;0.362351!10072-101I9;0.390789!10199-103F1;0.0833868!10200-103F2;0.775133!10697-109G4;0.608997!10723-110A3;0.808258!10179-103C8;0.770253!10160-103A7;0.254042!10180-103C9;0.232487!10162-103A9;0.223835!10021-101D3;0.0652633!10840-111E3;0.477971!10706-109H4;0.0332271!10033-101E6;0.838357!10032-101E5;0.575122!10490-107B4;0.353458!10439-106E7;0.365108!10022-101D4;0.975692!10176-103C5;0.924736!10469-106I1;0.307425!10067-101I4;0.717625!10411-106B6;0.663463!10471-106I3;0.276677!10030-101E3;0.189683!10475-106I7;0.459142!10787-110H4;0.335497!10477-106I9;0.867698!10695-109G2;0.195634!11771-123I7;0.376498!11772-123I8;0.569577!11773-123I9;0.704228!10093-102C3;0.63635!10442-106F1;0.510183!10442-106F1;0.577047!10201-103F3;0.490346!10639-108I9;0.753509!11843-124H7;0.200408!11841-124H5;0.891515!10693-109F9;0.441734!10436-106E4;0.734416!10483-107A6;0.835965!10282-104F3;0.787391!10023-101D5;0.603788!10066-101I3;0.485313!10065-101I2;0.488183!10800-110I8;0.932234!10610-108F7;0.77404!10841-111E4;0.452091!10541-107H1;0.883314!10842-111E5;0.948624!10562-108A4;0.829112!10024-101D6;0.135488!10064-101I1;0.305918!10609-108F6;0.21742!10048-101G3;0.90108!10781-110G7;0.630603!10181-103D1;0.456176!10159-103A6;0.4661!10056-101H2;0.551725!10737-110B8;0.337496!10025-101D7;0.593757!10044-101F8;0.218989!10424-106D1;0.613639!10463-106H4;0.14474!10616-108G4;0.586851!10486-107A9;0.90715!10062-101H8;0.632677!10202-103F4;0.513012!10158-103A5;0.802367!10441-106E9;0.661004!10031-101E4;0.065235!10063-101H9;0.275574!10063-101H9;0.377417!11763-123H8;0.224508!11765-123I1;0.504697!11768-123I4;0.514256!10807-111A6;0.499284!10790-110H7;0.44602!10798-110I6;0.952812!10786-110H3;0.141997!10591-108D6;0.208823!10593-108D8;0.725689!10590-108D5;0.421361!10026-101D8;0.972221!10096-102C6;0.866322!10168-103B6;0.342641!10154-103A1;0.219383!10209-103G2;0.43884!10061-101H7;0.707274!10027-101D9;0.271861!10043-101F7;0.684112!10783-110G9;0.7837!10028-101E1;0.0498043!10060-101H6;0.11103!10203-103F5;0.134671!10059-101H5;0.93866!10047-101G2;0.761669!10029-101E2;0.818618!10058-101H4;0.839369!10418-106C4;0.668961!10492-107B6;0.434857!10694-109G1;0.538535!10797-110I5;0.452425!10057-101H3;0.334192!10100-102D1;0.713953!10055-101H1;0.576616!10204-103F6;0.945222!10191-103E2;0.289033!10563-108A5;0.994008 | ||
|name=CGGCTTAAA,motif768,CNhs12840,T:987.0(27.55%),B:13171.2(19.79%),P:1e-28 | |name=CGGCTTAAA,motif768,CNhs12840,T:987.0(27.55%),B:13171.2(19.79%),P:1e-28 | ||
|tomtom_result=Tcfcp2l1#MA0145.1;1;0.00561791;2.67412;1;9;CGGCTTAAA;CTGGTTTGAACTGG;-!Ptx1#MA0201.1;-1;0.0065099;3.09871;1;7;CGGCTTAAA;GGATTAA;-!oc#MA0234.1;-1;0.0151825;7.22686;1;6;CGGCTTAAA;GGATTA;-!GCR1#MA0304.1;-1;0.0196028;9.33094;1;8;CGGCTTAAA;GGCTTCCA;-!bcd#MA0212.1;-1;0.0204865;9.7516;1;6;CGGCTTAAA;GGATTA;- | |||
}} | }} |
Latest revision as of 14:31, 7 September 2012
Full Name: CGGCTTAAA,motif768,CNhs12840,T:987.0(27.55%),B:13171.2(19.79%),P:1e-28
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
Tcfcp2l1#MA0145.1 | 1 | 0.00561791 | 2.67412 | 1 | 9 | CGGCTTAAA | CTGGTTTGAACTGG | - |
Ptx1#MA0201.1 | -1 | 0.0065099 | 3.09871 | 1 | 7 | CGGCTTAAA | GGATTAA | - |
oc#MA0234.1 | -1 | 0.0151825 | 7.22686 | 1 | 6 | CGGCTTAAA | GGATTA | - |
GCR1#MA0304.1 | -1 | 0.0196028 | 9.33094 | 1 | 8 | CGGCTTAAA | GGCTTCCA | - |
bcd#MA0212.1 | -1 | 0.0204865 | 9.7516 | 1 | 6 | CGGCTTAAA | GGATTA | - |