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MacroAPE 1083:CNhs10843 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;55.78782264253688;153.37782206829453;321.02321950881657;532.877923691284!2;83.95399335603602;23.261052100637464;590.1709566360815;365.680785...")
 
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669069!10534-107G3;0.0598504!10429-106D6;0.0595678!10464-106H5;0.0361515!10827-111C8;0.0893851!10789-110H6;0.172015!10828-111C9;0.22759!10788-110H5;0.566936!10792-110H9;0.111631!10765-110E9;0.242647!10829-111D1;0.189423!10830-111D2;0.237502!10831-111D3;0.251497!10832-111D4;0.615568!10833-111D5;0.137162!10764-110E8;0.16209!10770-110F5;0.152676!10399-106A3;0.137936!10400-106A4;0.318346!10405-106A9;0.34415!10834-111D6;0.27843!10835-111D7;0.241089!10836-111D8;0.353987!10837-111D9;0.138158!10699-109G6;0.425141!10802-111A1;0.450219!10796-110I4;0.140821!10010-101C1;0.278967!10810-111A9;0.0353007!10421-106C7;0.0331128!10708-109H6;0.242892!12235-129G3;0.580033!12236-129G4;0.25186!12237-129G5;0.691128!10167-103B5;0.352675!10151-102I7;0.496149!10428-106D5;0.500194!10795-110I3;0.939625!10805-111A4;0.239963!10052-101G7;0.0183234!10189-103D9;0.454336!10589-108D4;0.933525!10425-106D2;0.00862266!10427-106D4;0.367943!10702-109G9;0.0248233!10432-106D9;0.462386!10496-107C1;0.750751!10718-109I7;0.573483!10011-101C2;0.291555!10053-101G8;0.437304!10686-109F2;0.964896!10084-102B3;0.662421!10012-101C3;0.564447!10085-102B4;0.410311!10482-107A5;0.599781!10419-106C5;0.118034!10080-102A8;0.0222118!10760-110E4;0.579963!10709-109H7;0.260532!10710-109H8;0.45927!10703-109H1;0.127413!10719-109I8;0.00399982!10642-109A3;0.00585216!10177-103C6;0.00319563!10164-103B2;0.457078!10173-103C2;0.625567!10166-103B4;0.709789!10083-102B2;0.842333!10188-103D8;0.822294!10552-107I3;0.575863!10553-107I4;0.0498126!10013-101C4;0.316848!10536-107G5;0.399536!10618-108G6;0.81547!10423-106C9;0.602268!10785-110H2;0.490658!12238-129G6;0.409616!12239-129G7;0.145705!12240-129G8;0.045678!10416-106C2;0.086293!10801-110I9;0.101382!10766-110F1;0.994997!10824-111C5;0.456658!10825-111C6;0.184387!10826-111C7;0.197729!10454-106G4;0.282611!10409-106B4;0.159906!10638-108I8;0.343411!10636-108I6;0.439911!10513-107D9;0.58932!10420-106C6;0.504843!10082-102B1;0.0152403!10014-101C5;0.805851!10070-101I7;0.427905!10452-106G2;0.673896!10453-106G3;0.0662788!10449-106F8;0.0363814!10042-101F6;0.0497432!10069-101I6;0.423821!10193-103E4;0.379257!10631-108I1;0.529796!10438-106E6;0.024283!10488-107B2;0.149956!10196-103E7;0.174821!10071-101I8;0.963726!10071-101I8;0.809009!10041-101F5;0.500519!10451-106G1;0.12524!10450-106F9;0.0125059!10604-108F1;0.0138605!10605-108F2;0.501232!10606-108F3;0.646194!10603-108E9;0.431481!10497-107C2;0.634881!10448-106F7;0.0523436!10643-109A4;0.561369!10426-106D3;0.315224!10431-106D8;0.633598!10197-103E8;0.727083!10443-106F2;0.29717!10815-111B5;0.55917!10816-111B6;0.325171!10817-111B7;0.294478!10015-101C6;0.302911!10410-106B5;0.232309!10054-101G9;0.189856!10758-110E2;0.321309!10711-109H9;0.732782!10040-101F4;0.356739!10470-106I2;0.649137!10415-106C1;0.0271289!10198-103E9;0.314594!10614-108G2;0.413284!10612-108F9;0.0274702!10549-107H9;0.118859!10615-108G3;0.0264791!10487-107B1;0.0526042!10433-106E1;0.524254!10688-109F4;0.502202!10444-106F3;0.774006!10444-106F3;0.768151!10485-107A8;0.639393!10413-106B8;0.135761!10175-103C4;0.576475!10161-103A8;0.433189!12131-128D7;0.395099!10624-108H3;0.0230391!10712-109I1;0.592356!10205-103F7;0.0767582!10206-103F8;0.392541!10207-103F9;0.489824!10050-101G5;0.20632!10051-101G6;0.199746!10016-101C7;0.172951!10046-101G1;0.319564!10778-110G4;0.618102!10633-108I3;0.854963!10818-111B8;0.111685!10819-111B9;0.202619!10820-111C1;0.201267!10484-107A7;0.193243!10808-111A7;0.254792!10169-103B7;0.024843!10153-102I9;0.452457!13425-144D5;0.463106!13433-144E4;0.00728301!13437-144E8;0.00988452!11904-125F5;0.00814752!11905-125F6;0.391708!10039-101F3;0.8002!10791-110H8;0.598015!10017-101C8;0.858323!10045-101F9;0.162485!10509-107D5;0.57781!10839-111E2;0.408911!10692-109F8;0.601827!10079-102A7;0.235306!10078-102A6;0.257581!10721-110A1;0.181628!10569-108B2;0.071881!10570-108B3;0.0453474!10571-108B4;0.276086!10647-109A8;0.0586456!10752-110D5;0.439874!10782-110G8;0.214588!10726-110A6;0.0886786!10018-101C9;0.276701!10086-102B5;0.304941!10182-103D2;0.283412!10165-103B3;0.43652!10499-107C4;0.442179!10408-106B3;0.550794!10019-101D1;0.464983!10068-101I5;0.201819!10075-102A3;0.547896!10077-102A5;0.369792!10727-110A7;0.503845!10775-110G1;0.043659!10412-106B7;0.0395628!12231-129F8;0.463685!12232-129F9;0.8043!12233-129G1;0.595946!12234-129G2;0.762197!10414-106B9;0.440305!10170-103B8;0.0784501!10183-103D3;0.454548!10150-102I6;0.638982!10174-103C3;0.5325!10155-103A2;0.263143!10038-101F2;0.410088!10838-111E1;0.351449!10759-110E3;0.0491323!10514-107E1;0.234237!10465-106H6;0.461511!10691-109F7;0.316647!10843-111E6;0.716468!10844-111E7;0.0241624!11747-123G1;0.00454394!11748-123G2;0.811268!11749-123G3;0.881079!11750-123G4;0.290283!11751-123G5;0.172487!11840-124H4;0.190517!11752-123G6;0.295906!11753-123G7;0.46025!11754-123G8;0.330168!11755-123G9;0.915513!11756-123H1;0.713135!11833-124G6;0.402806!11760-123H5;0.0567103!11836-124G9;0.334503!11758-123H3;0.287066!11835-124G8;0.243763!11762-123H7;0.187141!11838-124H2;0.329661!11757-123H2;0.100518!11759-123H4;0.0940732!11761-123H6;0.244673!11842-124H6;0.137518!11837-124H1;0.104908!10568-108B1;0.22529!13230-141I8;0.456118!13231-141I9;0.450522!10696-109G3;0.729294!10493-107B7;0.999052!10494-107B8;0.776481!10850-111F4;0.163629!10851-111F5;0.113326!10852-111F6;0.945202!10853-111F7;0.825536!10854-111F8;0.0888615!10855-111F9;0.366965!10856-111G1;0.175114!10847-111F1;0.911588!10846-111E9;0.607829!10848-111F2;0.556558!10845-111E8;0.916378!10857-111G2;0.24754!10858-111G3;0.408769!10156-103A3;0.497634!11901-125F2;0.548398!11902-125F3;0.276636!11903-125F4;0.407121!10689-109F5;0.554863!10648-109A9;0.00361482!10784-110H1;0.530663!10744-110C6;0.999848!10772-110F7;0.173624!10474-106I6;0.0434511!10600-108E6;0.511807!10684-109E9;0.242239!12226-129F3;0.868733!12227-129F4;0.619079!10508-107D4;0.0982697!10539-107G8;0.00485531!10607-108F4;0.0227365!10555-107I6;0.0132562!10774-110F9;0.00399098!10637-108I7;0.0155584!10663-109C6;0.0218515!10728-110A8;0.0152139!10729-110A9;0.00321518!10430-106D7;0.977617!10730-110B1;0.0285124!10813-111B3;0.0543911!10812-111B2;0.872482!10037-101F1;0.806839!10172-103C1;0.62158!10163-103B1;0.856129!10076-102A4;0.504754!10073-102A1;0.712299!10036-101E9;0.309952!10195-103E6;0.593421!10277-104E7;0.618905!10434-106E2;0.446062!10550-107I1;0.745205!10545-107H5;0.0332092!10544-107H4;0.899596!10704-109H2;0.393505!10510-107D6;0.876707!10558-107I9;0.0331737!10020-101D2;0.0235573!10732-110B3;0.813902!10049-101G4;0.673991!10698-109G5;0.922531!10437-106E5;0.630824!10417-106C3;0.180879!10035-101E8;0.823454!10171-103B9;0.564441!10157-103A4;0.672948!10034-101E7;0.517905!10072-101I9;0.581522!10199-103F1;0.311363!10200-103F2;0.395108!10697-109G4;0.130629!10723-110A3;0.0451873!10179-103C8;0.264534!10160-103A7;0.427859!10180-103C9;0.73502!10162-103A9;0.829758!10021-101D3;0.70449!10840-111E3;0.106508!10706-109H4;0.0190946!10033-101E6;0.494148!10032-101E5;0.471422!10490-107B4;0.560277!10439-106E7;0.408135!10022-101D4;0.294019!10176-103C5;0.554692!10469-106I1;0.610471!10067-101I4;0.511145!10411-106B6;0.805887!10471-106I3;0.705054!10030-101E3;0.125537!10475-106I7;0.316745!10787-110H4;0.0437434!10477-106I9;0.159334!10695-109G2;0.0181246!11771-123I7;0.992945!11772-123I8;0.655712!11773-123I9;0.358992!10093-102C3;0.44104!10442-106F1;0.411373!10442-106F1;0.821949!10201-103F3;0.906831!10639-108I9;0.896789!11843-124H7;0.0708383!11841-124H5;0.570152!10693-109F9;0.278854!10436-106E4;0.28138!10483-107A6;0.997428!10282-104F3;0.844184!10023-101D5;0.0679765!10066-101I3;0.045829!10065-101I2;0.48581!10800-110I8;0.30187!10610-108F7;0.00342627!10841-111E4;0.0509377!10541-107H1;0.0047529!10842-111E5;0.0609718!10562-108A4;0.00628552!10024-101D6;0.0419768!10064-101I1;0.21838!10609-108F6;0.696886!10048-101G3;0.891066!10781-110G7;0.975218!10181-103D1;0.155709!10159-103A6;0.418389!10056-101H2;0.369318!10737-110B8;0.786327!10025-101D7;0.516777!10044-101F8;0.550292!10424-106D1;0.39565!10463-106H4;0.138479!10616-108G4;0.23246!10486-107A9;0.164663!10062-101H8;0.750342!10202-103F4;0.726776!10158-103A5;0.364525!10441-106E9;0.332872!10031-101E4;0.00312287!10063-101H9;0.547669!10063-101H9;0.405924!11763-123H8;0.588782!11765-123I1;0.512503!11768-123I4;0.635476!10807-111A6;0.676682!10790-110H7;0.0176713!10798-110I6;0.00942995!10786-110H3;0.00449054!10591-108D6;0.13159!10593-108D8;0.0605656!10590-108D5;0.0497935!10026-101D8;0.0299198!10096-102C6;0.751475!10168-103B6;0.000318262!10154-103A1;0.424642!10209-103G2;0.495436!10061-101H7;0.108483!10027-101D9;0.346009!10043-101F7;0.317788!10783-110G9;0.921126!10028-101E1;0.0446385!10060-101H6;0.308001!10203-103F5;0.18612!10059-101H5;0.0934574!10047-101G2;0.213796!10029-101E2;0.0864223!10058-101H4;0.107069!10418-106C4;0.280037!10492-107B6;0.0812092!10694-109G1;0.0756992!10797-110I5;0.953772!10057-101H3;0.236282!10100-102D1;0.28366!10055-101H1;0.636548!10204-103F6;0.786067!10191-103E2;0.767761!10563-108A5;0.311905
|name=CNhs10843_bu_f2
|name=CNhs10843_bu_f2
|tomtom_result=NFE2L2#MA0150.1;1;0.000646568;0.307766;0.308693;9;TGACTCAGC;ATGACTCAGCA;+!AP1#MA0099.2;0;0.000649365;0.309098;0.308693;7;TGACTCAGC;TGACTCA;+!Fos#MA0099.1;0;0.00103044;0.490488;0.326564;8;TGACTCAGC;TGACTCAC;-!ARG81#MA0272.1;1;0.00275342;1.31063;0.543579;7;TGACTCAGC;GTGACTCT;+!Foxa2#MA0047.2;3;0.00285867;1.36073;0.543579;9;TGACTCAGC;TGTTTACTTAGG;+!FOXA1#MA0148.1;3;0.00390676;1.85962;0.619062;8;TGACTCAGC;TGTTTACTTTG;+!Trl#MA0205.1;0;0.00757949;3.60784;0.908072;9;TGACTCAGC;TTGCTCTCTC;+!BAS1#MA0278.1;6;0.00804057;3.82731;0.908072;9;TGACTCAGC;TTGACTTGACTCTGGCTGTGC;-!CRZ1#MA0285.1;1;0.00859597;4.09168;0.908072;8;TGACTCAGC;GTGGCTTAG;-!GCN4#MA0303.1;7;0.00986566;4.69606;0.937982;9;TGACTCAGC;TGAAGTATGACTCATCCCTTG;-!MAC1#MA0326.1;1;0.0116493;5.54508;0.998691;7;TGACTCAGC;TTTGCTCA;+!Mafb#MA0117.1;-1;0.0199576;9.4998;0.998691;8;TGACTCAGC;GCGTCAGC;-
}}
}}

Latest revision as of 14:37, 7 September 2012

Full Name: CNhs10843_bu_f2

Motif matrix
POACGT
155.78782264253688153.37782206829453321.02321950881657532.877923691284
283.9539933560360223.261052100637464590.1709566360815365.68078581817815
3390.6606909364448322.249937001473347.704944410853442.4512155621607414
40.01063.06678791093370.00.0
50.00.00.01063.0667879109337
60.01063.06678791093370.00.0
7701.03133160193230.79398224620706080.7939822462070608360.44749181658665
837.59198873934092307.8369490885488712.55493514133315.08291494171145
9231.7680950758182399.36740483617314301.1237369488573130.8075510500843

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFE2L2#MA0150.110.0006465680.3077660.3086939TGACTCAGCATGACTCAGCA+
AP1#MA0099.200.0006493650.3090980.3086937TGACTCAGCTGACTCA+
Fos#MA0099.100.001030440.4904880.3265648TGACTCAGCTGACTCAC-
ARG81#MA0272.110.002753421.310630.5435797TGACTCAGCGTGACTCT+
Foxa2#MA0047.230.002858671.360730.5435799TGACTCAGCTGTTTACTTAGG+
FOXA1#MA0148.130.003906761.859620.6190628TGACTCAGCTGTTTACTTTG+
Trl#MA0205.100.007579493.607840.9080729TGACTCAGCTTGCTCTCTC+
BAS1#MA0278.160.008040573.827310.9080729TGACTCAGCTTGACTTGACTCTGGCTGTGC-
CRZ1#MA0285.110.008595974.091680.9080728TGACTCAGCGTGGCTTAG-
GCN4#MA0303.170.009865664.696060.9379829TGACTCAGCTGAAGTATGACTCATCCCTTG-
MAC1#MA0326.110.01164935.545080.9986917TGACTCAGCTTTGCTCA+
Mafb#MA0117.1-10.01995769.49980.9986918TGACTCAGCGCGTCAGC-
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