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MacroAPE 1083:ZEP2 si: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.4432989690721647;0.618556701030928;10.020618556701024;3.917525773195872!2;0.8247422680412368;3.298969072164944;8.74226804123712;3.13402061...")
 
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12198!10828-111C9;0.70123!10788-110H5;0.619743!10792-110H9;0.321339!10765-110E9;0.651774!10829-111D1;0.277243!10830-111D2;0.332818!10831-111D3;0.289444!10832-111D4;0.39026!10833-111D5;0.734532!10764-110E8;0.435066!10770-110F5;0.090711!10399-106A3;0.668685!10400-106A4;0.18361!10405-106A9;0.214228!10834-111D6;0.529596!10835-111D7;0.469579!10836-111D8;0.86842!10837-111D9;0.747384!10699-109G6;0.959978!10802-111A1;0.648721!10796-110I4;0.73749!10010-101C1;0.768659!10810-111A9;0.908635!10421-106C7;0.628363!10708-109H6;0.286452!12235-129G3;0.495024!12236-129G4;0.059032!12237-129G5;0.614384!10167-103B5;0.0748855!10151-102I7;0.33232!10428-106D5;0.312787!10795-110I3;0.357139!10805-111A4;0.8646!10052-101G7;0.503038!10189-103D9;0.675392!10589-108D4;0.709356!10425-106D2;0.372548!10427-106D4;0.788931!10702-109G9;0.430945!10432-106D9;0.520798!10496-107C1;0.49922!10718-109I7;0.42616!10011-101C2;0.37587!10053-101G8;0.885178!10686-109F2;0.670914!10084-102B3;0.209279!10012-101C3;0.106564!10085-102B4;0.234426!10482-107A5;0.0452178!10419-106C5;0.34626!10080-102A8;0.157636!10760-110E4;0.835644!10709-109H7;0.170086!10710-109H8;0.454203!10703-109H1;0.625942!10719-109I8;0.344238!10642-109A3;0.40371!10177-103C6;0.104475!10164-103B2;0.399545!10173-103C2;0.309115!10166-103B4;0.0435683!10083-102B2;0.0483941!10188-103D8;0.0122224!10552-107I3;0.280102!10553-107I4;0.473381!10013-101C4;0.556835!10536-107G5;0.987973!10618-108G6;0.718752!10423-106C9;0.829021!10785-110H2;0.880717!12238-129G6;0.994053!12239-129G7;0.0547529!12240-129G8;0.829518!10416-106C2;0.296117!10801-110I9;0.21944!10766-110F1;0.450824!10824-111C5;0.728324!10825-111C6;0.809321!10826-111C7;0.778784!10454-106G4;0.776553!10409-106B4;0.685797!10638-108I8;0.757329!10636-108I6;0.191559!10513-107D9;0.187966!10420-106C6;0.298179!10082-102B1;0.320168!10014-101C5;0.168686!10070-101I7;0.600217!10452-106G2;0.6239!10453-106G3;0.0653819!10449-106F8;0.116828!10042-101F6;0.146928!10069-101I6;0.370518!10193-103E4;0.507512!10631-108I1;0.150712!10438-106E6;0.855243!10488-107B2;0.769255!10196-103E7;0.772597!10071-101I8;0.658372!10071-101I8;0.643543!10041-101F5;0.0544382!10451-106G1;0.987335!10450-106F9;0.461897!10604-108F1;0.670033!10605-108F2;0.443805!10606-108F3;0.123574!10603-108E9;0.537666!10497-107C2;0.730112!10448-106F7;0.905334!10643-109A4;0.826993!10426-106D3;0.888841!10431-106D8;0.089392!10197-103E8;0.233374!10443-106F2;0.947686!10815-111B5;0.451881!10816-111B6;0.825679!10817-111B7;0.951363!10015-101C6;0.607755!10410-106B5;0.840379!10054-101G9;0.868157!10758-110E2;0.633828!10711-109H9;0.786524!10040-101F4;0.501995!10470-106I2;0.141197!10415-106C1;0.522071!10198-103E9;0.214101!10614-108G2;0.912442!10612-108F9;0.313363!10549-107H9;0.400006!10615-108G3;0.795686!10487-107B1;0.947224!10433-106E1;0.846605!10688-109F4;0.525027!10444-106F3;0.566346!10444-106F3;0.235386!10485-107A8;0.187919!10413-106B8;0.58546!10175-103C4;0.707326!10161-103A8;0.241638!12131-128D7;0.241666!10624-108H3;0.62997!10712-109I1;0.655409!10205-103F7;0.508173!10206-103F8;0.688395!10207-103F9;0.287087!10050-101G5;0.460249!10051-101G6;0.45425!10016-101C7;0.394754!10046-101G1;0.554258!10778-110G4;0.480346!10633-108I3;0.897034!10818-111B8;0.648569!10819-111B9;0.638891!10820-111C1;0.627801!10484-107A7;0.831063!10808-111A7;0.0553893!10169-103B7;0.775249!10153-102I9;0.385!13425-144D5;0.32837!13433-144E4;0.636285!13437-144E8;0.577181!11904-125F5;0.436555!11905-125F6;0.371839!10039-101F3;0.0629113!10791-110H8;0.147851!10017-101C8;0.776939!10045-101F9;0.297128!10509-107D5;0.662738!10839-111E2;0.966353!10692-109F8;0.657339!10079-102A7;0.167386!10078-102A6;0.614988!10721-110A1;0.302601!10569-108B2;0.649071!10570-108B3;0.488659!10571-108B4;0.361034!10647-109A8;0.480544!10752-110D5;0.631587!10782-110G8;0.82641!10726-110A6;0.69772!10018-101C9;0.285203!10086-102B5;0.756124!10182-103D2;0.936253!10165-103B3;0.758872!10499-107C4;0.45152!10408-106B3;0.0820878!10019-101D1;0.494278!10068-101I5;0.202408!10075-102A3;0.249464!10077-102A5;0.748181!10727-110A7;0.33062!10775-110G1;0.137015!10412-106B7;0.601316!12231-129F8;0.187309!12232-129F9;0.204366!12233-129G1;0.13971!12234-129G2;0.142723!10414-106B9;0.332355!10170-103B8;0.877161!10183-103D3;0.255392!10150-102I6;0.259651!10174-103C3;0.292464!10155-103A2;0.796814!10038-101F2;0.784829!10838-111E1;0.588721!10759-110E3;0.353482!10514-107E1;0.375444!10465-106H6;0.939364!10691-109F7;0.723443!10843-111E6;0.00124803!10844-111E7;0.0798414!11747-123G1;0.0817782!11748-123G2;0.487568!11749-123G3;0.225433!11750-123G4;0.175817!11751-123G5;0.0653083!11840-124H4;0.232767!11752-123G6;0.12603!11753-123G7;0.00442389!11754-123G8;0.0753513!11755-123G9;0.190305!11756-123H1;0.103256!11833-124G6;0.274349!11760-123H5;0.0271513!11836-124G9;0.0453828!11758-123H3;0.249896!11835-124G8;0.476544!11762-123H7;0.169504!11838-124H2;0.0710379!11757-123H2;0.737693!11759-123H4;0.277005!11761-123H6;0.140752!11842-124H6;0.0283427!11837-124H1;0.666036!10568-108B1;0.444961!13230-141I8;0.631916!13231-141I9;0.5427!10696-109G3;0.521074!10493-107B7;0.415655!10494-107B8;0.0350548!10850-111F4;0.394408!10851-111F5;0.728452!10852-111F6;0.0021945!10853-111F7;0.890014!10854-111F8;0.841362!10855-111F9;0.355065!10856-111G1;0.677973!10847-111F1;0.961757!10846-111E9;0.572311!10848-111F2;0.897418!10845-111E8;0.102886!10857-111G2;0.439642!10858-111G3;0.230736!10156-103A3;0.15656!11901-125F2;0.298012!11902-125F3;0.549438!11903-125F4;0.766687!10689-109F5;0.552664!10648-109A9;0.257611!10784-110H1;0.0248966!10744-110C6;0.609231!10772-110F7;0.0533122!10474-106I6;0.496583!10600-108E6;0.827108!10684-109E9;0.574086!12226-129F3;0.882003!12227-129F4;0.778067!10508-107D4;0.425349!10539-107G8;0.0293399!10607-108F4;0.106197!10555-107I6;0.291194!10774-110F9;0.0607803!10637-108I7;0.0554175!10663-109C6;0.0358559!10728-110A8;0.153354!10729-110A9;0.0534751!10430-106D7;0.372211!10730-110B1;0.567612!10813-111B3;0.243868!10812-111B2;0.886769!10037-101F1;0.960082!10172-103C1;0.212936!10163-103B1;0.139654!10076-102A4;0.285834!10073-102A1;0.141485!10036-101E9;0.033378!10195-103E6;0.12367!10277-104E7;0.178846!10434-106E2;0.321281!10550-107I1;0.290612!10545-107H5;0.417117!10544-107H4;0.449418!10704-109H2;0.371327!10510-107D6;0.18787!10558-107I9;0.922981!10020-101D2;0.550284!10732-110B3;0.978689!10049-101G4;0.0266965!10698-109G5;0.110411!10437-106E5;0.613789!10417-106C3;0.117584!10035-101E8;0.0372805!10171-103B9;0.175414!10157-103A4;0.243754!10034-101E7;0.313508!10072-101I9;0.158322!10199-103F1;0.0397088!10200-103F2;0.0930885!10697-109G4;0.774695!10723-110A3;0.144337!10179-103C8;0.197356!10160-103A7;0.200107!10180-103C9;0.184531!10162-103A9;0.703102!10021-101D3;0.90567!10840-111E3;0.834326!10706-109H4;0.154193!10033-101E6;0.43451!10032-101E5;0.301875!10490-107B4;0.116311!10439-106E7;0.761996!10022-101D4;0.878525!10176-103C5;0.606269!10469-106I1;0.266987!10067-101I4;0.256944!10411-106B6;0.213889!10471-106I3;0.0108827!10030-101E3;0.0226364!10475-106I7;0.628159!10787-110H4;0.173601!10477-106I9;0.629184!10695-109G2;0.24446!11771-123I7;0.663042!11772-123I8;0.0648732!11773-123I9;0.959892!10093-102C3;0.9911!10442-106F1;0.136316!10442-106F1;0.512132!10201-103F3;0.345309!10639-108I9;0.631681!11843-124H7;0.0126092!11841-124H5;0.000150953!10693-109F9;0.383283!10436-106E4;0.850304!10483-107A6;0.437976!10282-104F3;0.920328!10023-101D5;0.0318902!10066-101I3;0.608433!10065-101I2;0.417187!10800-110I8;0.523322!10610-108F7;0.539528!10841-111E4;0.0336944!10541-107H1;0.217246!10842-111E5;0.132618!10562-108A4;0.199897!10024-101D6;0.54333!10064-101I1;0.316696!10609-108F6;0.334083!10048-101G3;0.25621!10781-110G7;0.255239!10181-103D1;0.220112!10159-103A6;0.560226!10056-101H2;0.539016!10737-110B8;0.273175!10025-101D7;0.565231!10044-101F8;0.145602!10424-106D1;0.542913!10463-106H4;0.817395!10616-108G4;0.30646!10486-107A9;0.581226!10062-101H8;0.938805!10202-103F4;0.230572!10158-103A5;0.0936438!10441-106E9;0.246614!10031-101E4;0.228807!10063-101H9;0.129646!10063-101H9;0.0218493!11763-123H8;0.608059!11765-123I1;0.850781!11768-123I4;0.448873!10807-111A6;0.697493!10790-110H7;0.645676!10798-110I6;0.327759!10786-110H3;0.707867!10591-108D6;0.610727!10593-108D8;0.641204!10590-108D5;0.371403!10026-101D8;0.84957!10096-102C6;0.13511!10168-103B6;0.333492!10154-103A1;0.373976!10209-103G2;0.254399!10061-101H7;0.636839!10027-101D9;0.728168!10043-101F7;0.612315!10783-110G9;0.960148!10028-101E1;0.382351!10060-101H6;0.751098!10203-103F5;0.276383!10059-101H5;0.886793!10047-101G2;0.602782!10029-101E2;0.299951!10058-101H4;0.0674637!10418-106C4;0.929161!10492-107B6;0.42055!10694-109G1;0.198694!10797-110I5;0.567453!10057-101H3;0.487554!10100-102D1;0.619743!10055-101H1;0.61879!10204-103F6;0.753522!10191-103E2;0.946725!10563-108A5;0.774184
|name=ZEP2_si
|name=ZEP2_si
|tomtom_result=REL#MA0101.1;-5;0.000286499;0.136373;0.27055;9;GGTAGGGAAACCCC;GGAAATCCCC;-!RELA#MA0107.1;-5;0.0014015;0.667116;0.517459;9;GGTAGGGAAACCCC;GGAAATTCCC;-!Spz1#MA0111.1;-3;0.00234274;1.11514;0.517459;11;GGTAGGGAAACCCC;AGGGTAACAGC;+!dl_2#MA0023.1;-4;0.00291634;1.38818;0.517459;10;GGTAGGGAAACCCC;GGAAAACCCC;-!REB1#MA0363.1;-2;0.00303496;1.44464;0.517459;9;GGTAGGGAAACCCC;CCGGGTAAC;-!NFKB1#MA0105.1;-4;0.00380379;1.8106;0.517459;10;GGTAGGGAAACCCC;GGGGAATCCCC;-!GSM1#MA0308.1;-1;0.00414855;1.97471;0.517459;13;GGTAGGGAAACCCC;ATTAAAAAACTCCGGAGTATA;+!RFX1#MA0365.1;-4;0.00488987;2.32758;0.517459;8;GGTAGGGAAACCCC;TGGCAACC;-!MZF1_5-13#MA0057.1;0;0.00541105;2.57566;0.517459;10;GGTAGGGAAACCCC;GGAGGGGGAA;+!ZMS1#MA0441.1;0;0.00547964;2.60831;0.517459;9;GGTAGGGAAACCCC;TGCGGGGAA;-!NF-kappaB#MA0061.1;-4;0.00646164;3.07574;0.55472;10;GGTAGGGAAACCCC;GGAAATTCCC;-!HLF#MA0043.1;0;0.00710438;3.38168;0.559073;12;GGTAGGGAAACCCC;TATTACGTAACC;-!dl_1#MA0022.1;-2;0.00790183;3.76127;0.573995;12;GGTAGGGAAACCCC;CGGAAAAACCCC;-!znf143#MA0088.1;8;0.0101139;4.81422;0.645825;12;GGTAGGGAAACCCC;GCAAGGCATGATGGGAAATC;-!Cebpa#MA0102.1;-2;0.0102585;4.88303;0.645825;12;GGTAGGGAAACCCC;TTTCGCAATCTT;+!che-1#MA0260.1;-6;0.0122097;5.8118;0.71333;6;GGTAGGGAAACCCC;GAAACC;+!Gamyb#MA0034.1;-5;0.0134141;6.38512;0.71333;9;GGTAGGGAAACCCC;GACAACCGCC;+!ESR1#MA0112.2;1;0.0135969;6.47211;0.71333;14;GGTAGGGAAACCCC;GGCCCAGGTCACCCTGACCT;+!Pax4#MA0068.1;8;0.014525;6.91389;0.721914;14;GGTAGGGAAACCCC;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!Ar#MA0007.1;0;0.0180023;8.5691;0.762943;14;GGTAGGGAAACCCC;GGCGGGTACACGATGTTCTTAT;-
}}
}}

Latest revision as of 14:48, 7 September 2012

Full Name: ZEP2_si

Motif matrix
POACGT
11.44329896907216470.61855670103092810.0206185567010243.917525773195872
20.82474226804123683.2989690721649448.742268041237123.134020618556704
32.4742268041237124.9484536082474240.08.577319587628864
45.3608247422680480.82474226804123684.7835051546391845.030927835051552
52.0618556701030883.2989690721649447.7525773195876322.886597938144336
63.2989690721649440.012.7010309278350560.0
73.2989690721649440.012.7010309278350560.0
87.092783505154642.8865979381443360.06.020618556701024
914.3505154639175350.82474226804123680.82474226804123680.0
1012.8659793814432960.01.48453608247422731.64948453608248
110.09.0721649484536173.9587628865979362.969072164948448
122.6804123711340167.1340206185567042.6804123711340163.505154639175264
130.82474226804123689.4020618556700965.7731958762886560.0
140.41237113402061928.742268041237126.4329896907216480.4123711340206192

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
REL#MA0101.1-50.0002864990.1363730.270559GGTAGGGAAACCCCGGAAATCCCC-
RELA#MA0107.1-50.00140150.6671160.5174599GGTAGGGAAACCCCGGAAATTCCC-
Spz1#MA0111.1-30.002342741.115140.51745911GGTAGGGAAACCCCAGGGTAACAGC+
dl_2#MA0023.1-40.002916341.388180.51745910GGTAGGGAAACCCCGGAAAACCCC-
REB1#MA0363.1-20.003034961.444640.5174599GGTAGGGAAACCCCCCGGGTAAC-
NFKB1#MA0105.1-40.003803791.81060.51745910GGTAGGGAAACCCCGGGGAATCCCC-
GSM1#MA0308.1-10.004148551.974710.51745913GGTAGGGAAACCCCATTAAAAAACTCCGGAGTATA+
RFX1#MA0365.1-40.004889872.327580.5174598GGTAGGGAAACCCCTGGCAACC-
MZF1_5-13#MA0057.100.005411052.575660.51745910GGTAGGGAAACCCCGGAGGGGGAA+
ZMS1#MA0441.100.005479642.608310.5174599GGTAGGGAAACCCCTGCGGGGAA-
NF-kappaB#MA0061.1-40.006461643.075740.5547210GGTAGGGAAACCCCGGAAATTCCC-
HLF#MA0043.100.007104383.381680.55907312GGTAGGGAAACCCCTATTACGTAACC-
dl_1#MA0022.1-20.007901833.761270.57399512GGTAGGGAAACCCCCGGAAAAACCCC-
znf143#MA0088.180.01011394.814220.64582512GGTAGGGAAACCCCGCAAGGCATGATGGGAAATC-
Cebpa#MA0102.1-20.01025854.883030.64582512GGTAGGGAAACCCCTTTCGCAATCTT+
che-1#MA0260.1-60.01220975.81180.713336GGTAGGGAAACCCCGAAACC+
Gamyb#MA0034.1-50.01341416.385120.713339GGTAGGGAAACCCCGACAACCGCC+
ESR1#MA0112.210.01359696.472110.7133314GGTAGGGAAACCCCGGCCCAGGTCACCCTGACCT+
Pax4#MA0068.180.0145256.913890.72191414GGTAGGGAAACCCCGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Ar#MA0007.100.01800238.56910.76294314GGTAGGGAAACCCCGGCGGGTACACGATGTTCTTAT-
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