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MCL coexpression mm9:61: Difference between revisions

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{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
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|coexpression_dpi_cluster_scores_mean=0.0221054294305157,0.147914948524027,0.136022560901603,0.158159869368628,0.165112811847072,0.0553910016127548,0.0600005997006157,-0.0139709044278804,-0.0164662771146375,-0.0123820672983919,-0.0305903480554579,-0.0314480020564136,-0.0136664836371347,-0.0147923132904984,0.00294581128999462,0.000529587014526409,-0.00183599061125961,-0.00778353102000441,-0.00615934970337035,-0.00290112641735296,0.0713992425731252,-0.0237578093931896,-0.0262017893865105,0.134810511677111,0.128665767598438,0.131040193084125,0.121732864916917,0.107034937850725,0.174190737747884,0.135788529812236,0.111067776262039,-0.00916204237851581,-0.0146752308251757,-0.0549949340645007,0.0290776109539675,0.0310564689678316,0.0297239159338778,-0.0172319738165248,-0.0133689312918493,-0.0133266806865731,-0.0215202454671374,-0.025075039756227,-0.017606397680491,0.00823806155780159,0.00986602402517976,0.00871751400304221,0.0160479652589221,0.00593331247848359,0.0136903032596687,0.0159309968132558,0.00975162087674916,-0.00402468901629558,-0.0200347018628907,-0.0118548006303641,-0.0133910723828602,0.0135567113171256,0.0217486111530608,0.0259285446914879,-0.017214298359578,-0.0214262339122001,-0.0140050883817643,-0.0029603682380205,-0.00299751579939193,0.0285205244006396,0.0282932042208611,0.0290258169999843,0.030220215229927,0.0292224363810419,-0.0259501810157699,-0.025013813587897,-0.025701321301132,0.007852706225002,0.00675083513775827,-0.0297586583020767,-0.0260639344704365,-0.0250919908838523,-0.00725891560212049,0.00147120787612197,-0.00233584322527731,-0.0170952920542119,-0.0173567151613484,-0.019004421566717,0.00517434208165305,0.00424431171239757,0.00800922916624959,0.00416155877329297,-0.00487024903761085,-0.0116169912005522,-0.0206320486533515,-0.0116471921770319,0.0466562750051175,0.0683193211457473,0.0315430996142266,0.0652335085263437,0.0608979354820408,0.0576431818119314,0.0802818196090848,-0.00595773181410604,-0.00735310711043973,-0.00846478189210776,0.0229824722532023,-0.0108054441807378,-0.0251375123599971,-0.0421500642595657,-0.0146424132756527,-0.0151714408528409,-0.00939239329423891,0.119973884058763,0.020539648905931,0.0218963711538553,0.00784591030026689,0.0166127160900401,0.0244851751861473,0.0156577588079463,0.0205902949023145,0.0161990171017557,0.288134133568825,0.0158795755778911,0.00356758944588249,0.0179509329453211,0.0161351524560379,0.0195677338771581,0.0631522804946607,-5.51594103559402e-05,0.00492275885191271,0.144307541970697,-0.0166303168996221,-0.0151318411086895,-0.0147590274977277,0.00437334898276219,0.00308588142138138,-0.0161392634243708,-0.000341298583122287,0.000452955841776821,0.00806704854210307,0.00656883584378614,0.0269607539540751,0.044125374633896,0.0710043952874044,0.0550234129255817,-0.0030095198843276,0.00151030578010732,0.0085643312938568,0.0215491737019721,0.0144439206439574,0.014639857493834,0.0142552758748465,0.0394216163459871,-0.0116194981000496,-0.000519712381952155,-0.0052614645005565,0.00382830262068056,0.0119358450454614,0.0370540302991057,0.0309963118442231,0.0163016037421873,-0.00955549874863304,-0.0114894862873954,-0.0120667558080812,0.0100293671321155,0.0115904491146987,0.0033730854267622,0.00129288606543608,0.00266371011753307,-0.000255845902863868,-0.00184020581199464,-0.00536405260253446,0.0039090905451977,-0.000272978752153844,0.00367519895955065,0.00161161882944304,-0.00074944053728566,0.00307424928578381,0.0100441214104004,-0.00211423339867822,-0.00401238333820675,0.198042443185309,0.165626270706769,-0.00203122828170012,0.017633659579644,0.170486529107294,0.587435718633768,0.803678455332275,0.982607792165076,0.296269619946886,1.03817733559747,1.08069469377956,1.09347492179507,1.09101784548152,0.257540504446577,0.228312911211614,0.201160021617278,0.00741102017828957,0.0217116298492614,0.0474284491443605,0.0623900759377366,0.0865744922181151,0.107540750182733,0.155478446937498,0.166399747074396,0.184777854310869,0.183024174096556,0.0587299674462468,0.0178448307318353,0.0215412004689279,0.0211558753472683,0.02879211928521,0.0406010439792823,0.0641130778626177,0.0371581685379533,0.0368104905625638,0.0484038739514852,0.0586365859017823,0.0604804269688206,0.0623651451242807,0.0562178148420048,0.0615540777859803,0.075813875916114,0.0291305940756855,-0.00596539025911506,-0.00718905443317947,-0.000790802964689463,0.00244845210926362,0.00754854605826813,0.027057366014129,0.0263564321618653,0.0201619052612222,0.0184026406563816,0.0172892925049727,0.0269926834659266,0.0249285266029452,0.0316211412564754,0.0117579243797909,0.00913535337573544,0.0328054204289114,0.026769998973766,0.0111486391238643,0.00747063969115592,-0.014594681832686,0.00883729712815271,-0.0151299564669491,-0.0151112682254533,-0.01787801891215,-0.0111805344504686,-0.0126963588563018,-0.0185437796913741,-0.00846880480523595,-0.0106571431003796,-0.0116035913195485,-0.00351877685343425,0.0293674691262349,0.0270431327478572,0.0160323904983946,0.0327520575777754,0.00437881593361046,0.010039447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|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0469568706916304,0,0,0,0,0,0,0,0,0.0959343498639139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0526429550379996,0.493603819853823,0.734060882607074,0.921200345548346,0.168653336497203,0.941553710785482,0.991081241279195,1.01076594883,0.998623191342561,0,0.156026744954718,0.0788703512227347,0,0,0,0,0,0.0294389011296462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422410871849875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522685010172017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0849373898696927,0,0.170299062096306,0,0.0181219394037261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.073294297058821,0.0969751649251313,0.149856261570464,0.120876255993453,0.0978461107777356,0.098117166361508,0.139013627015232,0.138165606837579,0.120615306320652,0.128597245627104,0.169172763866184,0.129578075275077,0.141706336142815,0.14986111676545,0.158843797677303,0.128033729919821,0.131923786075207,0.092873634605593,0.110822898586572,0.138756502969784,0.126604887871452,0.135404897539632,0.104852396429652,0.108509213019874,0.0978397106066352,0.132229279644795,0.131521945174152,0.148982201447044,0.117229416500102,0.0766064454112358,0,0.166685587652774,0.155257708002722,0,0,0
|gostat_on_MCL_coexpression=GO:0005764;lysosome;0.0237295269921118;19141,71665,235504,17939,12091!GO:0000323;lytic vacuole;0.0237295269921118;19141,71665,235504,17939,12091!GO:0005773;vacuole;0.0273582182242956;19141,71665,235504,17939,12091!
|gostat_on_MCL_coexpression=GO:0005764;lysosome;0.0237295269921118;19141,71665,235504,17939,12091!GO:0000323;lytic vacuole;0.0237295269921118;19141,71665,235504,17939,12091!GO:0005773;vacuole;0.0273582182242956;19141,71665,235504,17939,12091!
}}
}}

Revision as of 12:36, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:51914781..51914796,-p3@Ros1
Mm9::chr10:51914832..51914889,-p1@Ros1
Mm9::chr10:74593726..74593746,+p@chr10:74593726..74593746
+
Mm9::chr10:77076476..77076515,+p4@Sumo3
Mm9::chr10:79882428..79882445,-p@chr10:79882428..79882445
-
Mm9::chr10:87966904..87966912,-p5@Chpt1
Mm9::chr11:109405008..109405050,+p3@Arsg
Mm9::chr11:115867837..115867856,+p@chr11:115867837..115867856
+
Mm9::chr11:115867863..115867878,+p@chr11:115867863..115867878
+
Mm9::chr11:44074007..44074026,-p@chr11:44074007..44074026
-
Mm9::chr11:45669742..45669754,+p@chr11:45669742..45669754
+
Mm9::chr11:57522478..57522499,+p@chr11:57522478..57522499
+
Mm9::chr11:5929219..5929252,-p@chr11:5929219..5929252
-
Mm9::chr11:60755160..60755171,+p3@Map2k3
Mm9::chr11:64845904..64845915,-p@chr11:64845904..64845915
-
Mm9::chr11:64845934..64845949,-p@chr11:64845934..64845949
-
Mm9::chr11:72315911..72315929,-p3@Spns3
Mm9::chr11:72315938..72315953,-p2@Spns3
Mm9::chr12:103661951..103661984,-p2@Lgmn
Mm9::chr12:105101472..105101509,-p@chr12:105101472..105101509
-
Mm9::chr12:105194779..105194802,-p@chr12:105194779..105194802
-
Mm9::chr12:112661459..112661475,+p@chr12:112661459..112661475
+
Mm9::chr12:113909391..113909409,-p@chr12:113909391..113909409
-
Mm9::chr12:83498365..83498376,+p@chr12:83498365..83498376
+
Mm9::chr12:85394389..85394400,+p@chr12:85394389..85394400
+
Mm9::chr13:4233032..4233043,+p@chr13:4233032..4233043
+
Mm9::chr13:73764613..73764631,+p2@Tert
Mm9::chr13:73764633..73764645,+p4@Tert
Mm9::chr13:73837397..73837411,+p1@5430425J12Rik
Mm9::chr14:20931791..20931792,-p@chr14:20931791..20931792
-
Mm9::chr14:20957731..20957741,-p@chr14:20957731..20957741
-
Mm9::chr14:20957769..20957788,-p@chr14:20957769..20957788
-
Mm9::chr14:54778131..54778142,+p1@ENSMUST00000103688
Mm9::chr15:100233689..100233701,-p7@Slc11a2
Mm9::chr15:100233765..100233775,-p8@Slc11a2
Mm9::chr15:100233813..100233831,-p4@Slc11a2
Mm9::chr15:100233839..100233859,-p3@Slc11a2
Mm9::chr15:12349300..12349346,-p@chr15:12349300..12349346
-
Mm9::chr15:12349347..12349358,-p@chr15:12349347..12349358
-
Mm9::chr15:12349385..12349398,-p@chr15:12349385..12349398
-
Mm9::chr15:66946738..66946755,-p@chr15:66946738..66946755
-
Mm9::chr15:76445471..76445485,-p@chr15:76445471..76445485
-
Mm9::chr15:76446342..76446390,-p@chr15:76446342..76446390
-
Mm9::chr15:82167439..82167450,-p@chr15:82167439..82167450
-
Mm9::chr15:82169200..82169221,-p1@Naga
Mm9::chr15:82169231..82169284,-p2@Naga
Mm9::chr16:16367340..16367364,-p@chr16:16367340..16367364
-
Mm9::chr16:17097078..17097095,-p3@Ppil2
Mm9::chr16:17509251..17509266,+p4@Lztr1
Mm9::chr16:17509308..17509333,+p2@Lztr1
Mm9::chr16:17511153..17511183,+p7@Lztr1
Mm9::chr16:31878954..31878969,+p1@Mfi2
Mm9::chr16:31897933..31897978,+p@chr16:31897933..31897978
+
Mm9::chr16:32487238..32487247,-p@chr16:32487238..32487247
-
Mm9::chr16:32487254..32487277,-p@chr16:32487254..32487277
-
Mm9::chr16:32487281..32487305,-p@chr16:32487281..32487305
-
Mm9::chr16:32487311..32487376,-p@chr16:32487311..32487376
-
Mm9::chr16:32487959..32487981,-p3@Osta
Mm9::chr16:32487983..32488004,-p4@Osta
Mm9::chr16:32488179..32488217,+p@chr16:32488179..32488217
+
Mm9::chr16:90997347..90997353,+p@chr16:90997347..90997353
+
Mm9::chr17:35068293..35068329,+p1@Neu1
Mm9::chr17:35141626..35141635,+p15@Vars
Mm9::chr17:35141640..35141673,+p9@Vars
Mm9::chr17:56427286..56427289,-p@chr17:56427286..56427289
-
Mm9::chr17:73492035..73492049,+p@chr17:73492035..73492049
+
Mm9::chr18:42739415..42739444,-p1@Gpr151
Mm9::chr18:42739447..42739459,-p2@Gpr151
Mm9::chr18:61287405..61287471,+p@chr18:61287405..61287471
+
Mm9::chr18:73338986..73338988,-p@chr18:73338986..73338988
-
Mm9::chr18:73411461..73411468,-p@chr18:73411461..73411468
-
Mm9::chr19:10557159..10557198,-p@chr19:10557159..10557198
-
Mm9::chr19:34766031..34766055,-p@chr19:34766031..34766055
-
Mm9::chr19:40662828..40662861,-p2@Aldh18a1
Mm9::chr19:40662943..40662954,-p5@Aldh18a1
Mm9::chr19:40662960..40662961,-p6@Aldh18a1
Mm9::chr19:47530107..47530145,+p@chr19:47530107..47530145
+
Mm9::chr1:155396827..155396854,-p1@Npl
Mm9::chr1:187275480..187275499,-p@chr1:187275480..187275499
-
Mm9::chr1:187275501..187275535,-p@chr1:187275501..187275535
-
Mm9::chr1:34181464..34181475,+p@chr1:34181464..34181475
+
Mm9::chr1:84337652..84337672,-p6@Pid1
Mm9::chr1:95590297..95590312,+p@chr1:95590297..95590312
+
Mm9::chr1:9778477..9778488,+p@chr1:9778477..9778488
+
Mm9::chr1:9778490..9778501,+p@chr1:9778490..9778501
+
Mm9::chr2:119872822..119872824,-p@chr2:119872822..119872824
-
Mm9::chr2:128646434..128646454,+p@chr2:128646434..128646454
+
Mm9::chr2:130989850..130989862,-p@chr2:130989850..130989862
-
Mm9::chr2:130989879..130989888,-p@chr2:130989879..130989888
-
Mm9::chr2:130989890..130989906,-p@chr2:130989890..130989906
-
Mm9::chr2:144290130..144290169,+p1@ENSMUST00000149523
Mm9::chr2:153067233..153067236,-p4@Plagl2
Mm9::chr2:153067343..153067354,+p3@Pofut1
Mm9::chr2:165710566..165710571,-p13@Zmynd8
Mm9::chr2:180067095..180067107,+p1@ENSMUST00000069943
Mm9::chr2:181385166..181385171,+p@chr2:181385166..181385171
+
Mm9::chr2:25097099..25097116,+p@chr2:25097099..25097116
+
Mm9::chr2:25228753..25228761,+p@chr2:25228753..25228761
+
Mm9::chr2:25228775..25228786,+p@chr2:25228775..25228786
+
Mm9::chr2:25426821..25426841,-p1@Mamdc4
Mm9::chr2:25430095..25430152,-p@chr2:25430095..25430152
-
Mm9::chr2:72651722..72651742,-p1@ENSMUST00000136807
Mm9::chr3:107021927..107021974,-p@chr3:107021927..107021974
-
Mm9::chr3:135489192..135489207,+p7@Slc39a8
Mm9::chr3:135489215..135489234,+p6@Slc39a8
Mm9::chr3:135489239..135489293,+p4@Slc39a8
Mm9::chr3:145780415..145780426,+p5@Mcoln3
Mm9::chr3:145780432..145780485,+p1@Mcoln3
Mm9::chr3:145780491..145780504,+p4@Mcoln3
Mm9::chr3:145780505..145780508,+p6@Mcoln3
Mm9::chr3:145780665..145780682,+p@chr3:145780665..145780682
+
Mm9::chr3:145783719..145783725,+p@chr3:145783719..145783725
+
Mm9::chr3:79646779..79646854,-p1@Tmem144
Mm9::chr3:79681183..79681205,+p@chr3:79681183..79681205
+
Mm9::chr3:79681206..79681228,+p@chr3:79681206..79681228
+
Mm9::chr3:89170199..89170214,+p@chr3:89170199..89170214
+
Mm9::chr4:104446612..104446620,+p@chr4:104446612..104446620
+
Mm9::chr4:104448462..104448483,+p@chr4:104448462..104448483
+
Mm9::chr4:106295133..106295147,+p3@Ttc22
Mm9::chr4:106675198..106675233,+p@chr4:106675198..106675233
+
Mm9::chr4:115721260..115721290,-p5@Nsun4
Mm9::chr4:117807278..117807292,-p3@St3gal3
Mm9::chr4:118929758..118929778,-p1@ENSMUST00000150252
Mm9::chr4:118930017..118930033,+p@chr4:118930017..118930033
+
Mm9::chr4:122638692..122638696,-p2@Mfsd2a
Mm9::chr4:128784013..128784023,+p6@Tmem54
Mm9::chr4:128784034..128784047,+p4@Tmem54
Mm9::chr4:128785016..128785038,+p@chr4:128785016..128785038
+
Mm9::chr4:131228048..131228061,-p1@ENSMUST00000144212
Mm9::chr4:131859246..131859265,-p1@Rab42-ps
Mm9::chr4:135476646..135476716,+p1@Fuca1
Mm9::chr4:135485669..135485692,+p2@Fuca1
Mm9::chr4:135485712..135485725,+p3@Fuca1
Mm9::chr4:136243905..136243914,-p@chr4:136243905..136243914
-
Mm9::chr4:136243923..136243934,-p@chr4:136243923..136243934
-
Mm9::chr4:136243951..136243958,-p@chr4:136243951..136243958
-
Mm9::chr4:136358059..136358074,+p@chr4:136358059..136358074
+
Mm9::chr4:141604446..141604455,-p2@ENSMUST00000128385
Mm9::chr4:141604484..141604499,-p1@ENSMUST00000128385
Mm9::chr4:144376454..144376469,-p1@Gm438
Mm9::chr4:45861547..45861568,+p3@1300002K09Rik
Mm9::chr5:109189074..109189088,-p@chr5:109189074..109189088
-
Mm9::chr5:138369898..138369912,+p@chr5:138369898..138369912
+
Mm9::chr5:139828561..139828577,+p1@Cyp2w1
Mm9::chr5:139830195..139830214,+p@chr5:139830195..139830214
+
Mm9::chr5:140836332..140836382,-p2@Snx8
Mm9::chr5:148706353..148706362,-p3@Slc46a3
Mm9::chr5:148706363..148706374,-p2@Slc46a3
Mm9::chr5:148706380..148706406,-p1@Slc46a3
Mm9::chr5:148713734..148713744,-p@chr5:148713734..148713744
-
Mm9::chr5:31340635..31340649,-p7@Slc5a6
Mm9::chr5:36082674..36082705,-p3@Sh3tc1
Mm9::chr5:53385666..53385683,-p1@uc008xky.1
Mm9::chr5:64655448..64655459,+p@chr5:64655448..64655459
+
Mm9::chr5:64655464..64655493,+p@chr5:64655464..64655493
+
Mm9::chr5:64655555..64655609,+p@chr5:64655555..64655609
+
Mm9::chr5:64655612..64655621,+p@chr5:64655612..64655621
+
Mm9::chr5:66154757..66154780,+p4@N4bp2
Mm9::chr6:125292780..125292791,+p@chr6:125292780..125292791
+
Mm9::chr6:125292797..125292837,+p@chr6:125292797..125292837
+
Mm9::chr6:16805948..16806002,-p@chr6:16805948..16806002
-
Mm9::chr6:24813870..24813919,+p@chr6:24813870..24813919
+
Mm9::chr6:24813923..24813928,+p@chr6:24813923..24813928
+
Mm9::chr6:41591717..41591732,+p@chr6:41591717..41591732
+
Mm9::chr6:41591734..41591752,+p@chr6:41591734..41591752
+
Mm9::chr6:48361586..48361598,+p@chr6:48361586..48361598
+
Mm9::chr6:48361612..48361623,+p@chr6:48361612..48361623
+
Mm9::chr6:48362155..48362169,+p@chr6:48362155..48362169
+
Mm9::chr6:48363021..48363033,+p9@Krba1
Mm9::chr6:48824180..48824191,+p@chr6:48824180..48824191
+
Mm9::chr6:54423148..54423168,-p@chr6:54423148..54423168
-
Mm9::chr7:109019171..109019190,-p7@Folr1
Mm9::chr7:109019201..109019221,-p12@Folr1
Mm9::chr7:109019225..109019270,-p1@Folr1
Mm9::chr7:139761841..139761857,-p@chr7:139761841..139761857
-
Mm9::chr7:139761873..139761915,-p@chr7:139761873..139761915
-
Mm9::chr7:149846769..149846770,-p@chr7:149846769..149846770
-
Mm9::chr7:17006302..17006345,+p@chr7:17006302..17006345
+
Mm9::chr7:30290747..30290767,-p14@Sipa1l3
Mm9::chr7:30290773..30290784,-p19@Sipa1l3
Mm9::chr7:30290794..30290809,-p9@Sipa1l3
Mm9::chr7:31445255..31445267,-p@chr7:31445255..31445267
-
Mm9::chr7:31445269..31445282,-p@chr7:31445269..31445282
-
Mm9::chr7:38016087..38016099,-p@chr7:38016087..38016099
-
Mm9::chr7:52356502..52356506,-p@chr7:52356502..52356506
-
Mm9::chr7:52358540..52358559,-p@chr7:52358540..52358559
-
Mm9::chr7:52358569..52358598,-p@chr7:52358569..52358598
-
Mm9::chr7:52359096..52359103,-p2@Fcgrt
Mm9::chr7:52359117..52359170,-p1@Fcgrt
Mm9::chr7:52359342..52359362,-p3@Fcgrt
Mm9::chr7:94452759..94452773,+p@chr7:94452759..94452773
+
Mm9::chr7:94452779..94452797,+p@chr7:94452779..94452797
+
Mm9::chr7:94452798..94452815,+p@chr7:94452798..94452815
+
Mm9::chr8:13974676..13974698,-p1@2610019F03Rik
Mm9::chr8:13974715..13974737,-p2@2610019F03Rik
Mm9::chr8:23506704..23506720,-p@chr8:23506704..23506720
-
Mm9::chr8:35112002..35112009,-p@chr8:35112002..35112009
-
Mm9::chr8:35118952..35118963,-p@chr8:35118952..35118963
-
Mm9::chr8:37281719..37281751,-p@chr8:37281719..37281751
-
Mm9::chr8:41718934..41718964,+p@chr8:41718934..41718964
+
Mm9::chr8:72712757..72712785,-p@chr8:72712757..72712785
-
Mm9::chr8:87860297..87860341,-p@chr8:87860297..87860341
-
Mm9::chr9:107558952..107558970,-p@chr9:107558952..107558970
-
Mm9::chr9:107559006..107559023,-p@chr9:107559006..107559023
-
Mm9::chr9:114310257..114310273,+p1@Glb1
Mm9::chr9:59796270..59796294,-p4@Nr2e3
Mm9::chr9:59796330..59796350,-p6@Nr2e3
Mm9::chr9:59796372..59796383,-p8@Nr2e3
Mm9::chr9:59797088..59797101,-p9@Nr2e3
Mm9::chr9:59797133..59797145,-p7@Nr2e3
Mm9::chr9:60330166..60330193,+p@chr9:60330166..60330193
+
Mm9::chr9:64574390..64574394,-p7@Rab11a
Mm9::chr9:66423835..66423855,-p9@Usp3
Mm9::chr9:78432883..78432894,-p@chr9:78432883..78432894
-
Mm9::chr9:78432920..78432931,-p@chr9:78432920..78432931
-
Mm9::chr9:78432932..78432942,-p@chr9:78432932..78432942
-
Mm9::chr9:78432956..78432980,-p@chr9:78432956..78432980
-
Mm9::chr9:78435775..78435854,-p1@Slc17a5
Mm9::chrX:136342792..136342806,+p@chrX:136342792..136342806
+
Mm9::chrX:68828930..68828973,+p@chrX:68828930..68828973
+
Mm9::chrX:71173335..71173359,-p4@Renbp
Mm9::chrX:71173379..71173396,-p5@Renbp
Mm9::chrX:71173431..71173440,-p7@Renbp
Mm9::chrX:71175859..71175871,-p@chrX:71175859..71175871
-
Mm9::chrX:71176056..71176067,-p6@Renbp
Mm9::chrX:71176074..71176089,-p3@Renbp
Mm9::chrX:93160531..93160569,-p@chrX:93160531..93160569
-
Mm9::chrX:93165422..93165431,-p@chrX:93165422..93165431
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0005764lysosome0.0237295269921118
GO:0000323lytic vacuole0.0237295269921118
GO:0005773vacuole0.0273582182242956



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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