Personal tools

MCL coexpression mm9:2850: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.0069057242819042,0.261218852105004,0.356011002495824,0.257348367510958,0.399796957431707,0.323825628663863,0.349855535161984,0.685394160515431,0.986090824950556,1.01910297181571,0.387493473718589,0.381707508524866,0.677891703252593,0.584505069852762,0.355842427226593,0.384572226574056,0.428666489090472,0.33738941064267,0.316631490992778,0.315807468844761,0.225755074636305,0.150786284275526,0.114277117295939,0.173439997232889,0.217981030642416,0.204670173013566,0.308675884075099,0.288837502160839,0.0399818271509306,0.12744465218115,0.195987898814821,0.404900132646268,0.401762045204891,-0.379900055739639,0.230213245164354,0.178992809162236,0.329348133864278,0.303277132060976,0.0886186193666653,0.200323104432168,0.0980706671573953,0.141573734353705,-0.02200247281165,-0.0556151444128847,-0.130703553660479,-0.193447134261362,-0.109447914504921,-0.102508089935084,-0.108957093159107,-0.134716447213383,-0.0688074973516606,-0.138131645045215,0.432393206978887,0.909224500502841,0.690227195686435,-0.00140849746359267,-0.0264693107234155,0.0904061421016818,0.0680953826263616,-0.0911791391801162,0.0791255040204975,-0.213636460013456,-0.0768153276349402,-0.0916982052629493,-0.121865707818253,-0.043454463202754,-0.127003532714756,0.00895712249482164,0.0923468803837203,0.0525303062671204,0.0194970805977037,0.00357215321138303,0.0246173443526087,0.0059286180693121,0.0543534745882343,-0.0726062259536406,-0.164927470049523,-0.0380740449453086,-0.0139645767875337,-0.0307918546611664,-0.0534444745165136,-0.0675397595949232,-0.042061915431879,-0.0732633938259302,0.0238780981272373,0.140920646680451,0.0998315180644722,0.0360285332690695,0.0141854974084972,0.0587686983618366,0.216300666547569,-0.145128007061953,0.072970169901706,-0.273920264800531,-0.19450185649567,-0.156120170498263,-0.0672539079512455,-0.0760375169608894,0.0182429657280679,-0.0489975049637283,-0.0383330928049389,-0.151325615485825,0.065114093881988,0.014250850105565,0.0792966394103657,0.0475007795476948,0.0324516092784732,0.0590484354073293,0.171635921361809,-0.084781638696892,0.156394304208745,-0.0018660414212541,-0.0480749907580404,-0.0479246654456673,-0.134508365184797,-0.0999824848211609,-0.0133794323227066,-0.222549164781428,0.299228902172302,0.0161383882425617,0.184006476034674,0.227621644645745,-0.106899750823546,0.0370595921859557,-0.0260436095132108,0.0719901493061272,0.304812067235846,0.320412270040676,0.209370836419203,-0.101689670342317,-0.117527755326105,-0.0660278266372379,-0.104435445926601,-0.102000592023407,-0.11513889099247,-0.106487409977025,-0.0266645224910405,0.0568675591497095,-0.238991561735302,-0.0552521678100188,0.114883791298314,0.123782243113423,-0.0275818554963331,0.0375044443304274,0.124325588060167,0.0656453493426165,0.0689008756525203,-0.0754562376739697,0.242133226461377,0.0760893260035933,0.0218756953323352,0.017734413037097,-0.0297985083430142,-0.115215253412089,-0.00571600767411296,0.0771391990731907,0.0419939075844473,0.209763266239695,0.0670560572625704,0.0424328232903923,-0.0405155656969082,-0.068114417219726,-0.0252071402398501,-0.0661932111183543,-0.0708630280357385,-0.0624643072422073,-0.0603168896585852,-0.166808707415439,-0.0222670244498861,-0.131544626487216,-0.124595613678169,-0.201612833654031,-0.184590461779796,-0.139864621487069,-0.141070924656595,0.0760064370743126,0.0744048511128419,0.0603992452248415,0.082460729241627,0.0581297892061354,0.0784733419895506,-0.0215061715668736,0.0867803213875241,-0.0499272333575408,0.163921849550485,-0.071228112723306,-0.0134146527167979,-0.0133367802081363,0.000638460802663133,0.0460901559191884,-0.0692045373751943,-0.0329023978328371,0.0279305234211268,0.118518144600295,0.0875792122027443,0.00224236337239187,-0.0892523580645643,-0.0899262019248294,-0.143185911801971,-0.204893940312751,-0.150965573584756,-0.133037758421751,-0.160326671691389,0.248294152773042,0.351537821911187,0.391724138757373,0.394611487162516,0.25435257272998,0.215442865010692,0.190899917566625,0.106939350069561,0.132159999624258,-0.0319322844787163,-0.0916032572017468,-0.047882129003812,-0.128271310452482,-0.177423768830353,-0.25033584439676,-0.00296674244038427,0.104577702838049,0.109314797048387,0.103562190590822,0.036512173155377,-0.0223431156677912,-0.126403959922475,-0.0524417142302872,-0.0250399847376114,-0.0317961505401509,-0.0528392577521166,-0.0531209416601499,-0.0742336790264955,-0.0529206015813709,-0.0458810483131928,-0.0876952851800661,0.014629163279974,-0.0794972423593033,-0.144799803207665,-0.0611567477618681,-0.0203686707395758,-0.160735650551546,0.0911895880053122,0.188854294440997,0.15527448260714,0.0931999415023341,-0.0192812715873382,0.006452285314631,0.198737085006943,0.146798823829414,0.00297482131993183,-0.110808648235913,-0.0706717538634668,0.0162457408732262,-0.010043022344198,-0.0345394764900672,-0.257606516387479,0.0502512552889584,0.102544458502551,0.0476168969650901,-0.160765968402571,-0.0627144731401611,0.0374450409314647,0.113487117692784,0.017602037834809,-0.055221279234916,-0.140766871148516,-0.0138130989570897,-0.010669242257809,0.126077701665103,-0.0364318594181246,-0.0745588940753461,0.0209239182553216,-0.0764879573342916,0.0146777250598694,-0.046696923992843,0.0327777659593914,0.0644132027365398,-0.0797857336195547,-0.117851403339794,-0.109901866669249,-0.0169039961954154,-0.00715048732679923,-0.00850298759151199,-0.010268206908379,-0.0602433332783882,0.443297203744477,0.136169596933223,0.123188226725256,0.333994471895837,0.354327531541048,0.350363700703669,0.321615366900534,0.461985349626257,0.387825808864233,-0.184220572380486,0.141464994195747,0.0314071356588993,-0.0112368813850175,0.0369927196871835,-0.0717798809604169,-0.0614970339199753,-0.065053575856643,-0.131664387750699,-0.0421076715155686,0.0350303489066306,0.861738793696092,-0.00456109096364513,0.0355480481210255,-0.0188426066381566,0.0329939837041844,0.0427349385214504,0.0102917675146473,0.159508119232992,0.316287038304734,0.443891121302992,0.574900462206666,0.292363911526743,0.0777318792037324,0.0767059774628588,0.188559869713924,0.131131310088854,0.114466584277355,0.246506308379895,0.17806563311906,0.194093973930852,0.239234181922622,0.197577191107945,0.204762500841974,0.195424608055726,0.123777353126119,-0.103977652487145,0.22637508222027,0.317008231197849,0.181470339941716,-0.131205940815055,-0.103243401856086,-0.0195769700551128,-0.0465021097334335,-0.0612887622459727,0.0110973091631507,-0.116567963534728,-0.0525753779719716,-0.0178140264015952,-0.125534479714249,-0.178434643700654,-0.0212894245382483,-0.173805612812454,-0.115178163363345,-0.157070441857134,0.153885618199419,0.222772944094962,0.14191079122272,0.0832108802295127,0.114305246201634,0.0378582641315207,0.0261496526708686,0.0852992916676403,0.0817895703702473,0.0236412930289523,0.0093444852821398,0.0191332338149383,0.0153456710981149,0.00570691380226632,-0.01832770166248,-0.0116616395851138,0.0250908639906986,0.0163367146723467,-0.112146660831165,0.0521558152114487,-0.0123363195655353,-0.0269049889514511,0.0916412216863947,0.0487519626934958,0.0290058476912037,0.0392627969593261,-0.0485950254469977,-0.0297676732759965,0.00348762846338207,0.051077454837667,0.0534710276296428,0.0134485280661204,0.0619857765283969,-0.00564932628325266,0.0086430106567243,0.0558404629448722,-0.00962477308369223,-0.0787191351452085,-0.048921811136903,-0.0210706120286186,-0.0332074622494553
|coexpression_dpi_cluster_scores_mean=0.0069057242819042,0.261218852105004,0.356011002495824,0.257348367510958,0.399796957431707,0.323825628663863,0.349855535161984,0.685394160515431,0.986090824950556,1.01910297181571,0.387493473718589,0.381707508524866,0.677891703252593,0.584505069852762,0.355842427226593,0.384572226574056,0.428666489090472,0.33738941064267,0.316631490992778,0.315807468844761,0.225755074636305,0.150786284275526,0.114277117295939,0.173439997232889,0.217981030642416,0.204670173013566,0.308675884075099,0.288837502160839,0.0399818271509306,0.12744465218115,0.195987898814821,0.404900132646268,0.401762045204891,-0.379900055739639,0.230213245164354,0.178992809162236,0.329348133864278,0.303277132060976,0.0886186193666653,0.200323104432168,0.0980706671573953,0.141573734353705,-0.02200247281165,-0.0556151444128847,-0.130703553660479,-0.193447134261362,-0.109447914504921,-0.102508089935084,-0.108957093159107,-0.134716447213383,-0.0688074973516606,-0.138131645045215,0.432393206978887,0.909224500502841,0.690227195686435,-0.00140849746359267,-0.0264693107234155,0.0904061421016818,0.0680953826263616,-0.0911791391801162,0.0791255040204975,-0.213636460013456,-0.0768153276349402,-0.0916982052629493,-0.121865707818253,-0.043454463202754,-0.127003532714756,0.00895712249482164,0.0923468803837203,0.0525303062671204,0.0194970805977037,0.00357215321138303,0.0246173443526087,0.0059286180693121,0.0543534745882343,-0.0726062259536406,-0.164927470049523,-0.0380740449453086,-0.0139645767875337,-0.0307918546611664,-0.0534444745165136,-0.0675397595949232,-0.042061915431879,-0.0732633938259302,0.0238780981272373,0.140920646680451,0.0998315180644722,0.0360285332690695,0.0141854974084972,0.0587686983618366,0.216300666547569,-0.145128007061953,0.072970169901706,-0.273920264800531,-0.19450185649567,-0.156120170498263,-0.0672539079512455,-0.0760375169608894,0.0182429657280679,-0.0489975049637283,-0.0383330928049389,-0.151325615485825,0.065114093881988,0.014250850105565,0.0792966394103657,0.0475007795476948,0.0324516092784732,0.0590484354073293,0.171635921361809,-0.084781638696892,0.156394304208745,-0.0018660414212541,-0.0480749907580404,-0.0479246654456673,-0.134508365184797,-0.0999824848211609,-0.0133794323227066,-0.222549164781428,0.299228902172302,0.0161383882425617,0.184006476034674,0.227621644645745,-0.106899750823546,0.0370595921859557,-0.0260436095132108,0.0719901493061272,0.304812067235846,0.320412270040676,0.209370836419203,-0.101689670342317,-0.117527755326105,-0.0660278266372379,-0.104435445926601,-0.102000592023407,-0.11513889099247,-0.106487409977025,-0.0266645224910405,0.0568675591497095,-0.238991561735302,-0.0552521678100188,0.114883791298314,0.123782243113423,-0.0275818554963331,0.0375044443304274,0.124325588060167,0.0656453493426165,0.0689008756525203,-0.0754562376739697,0.242133226461377,0.0760893260035933,0.0218756953323352,0.017734413037097,-0.0297985083430142,-0.115215253412089,-0.00571600767411296,0.0771391990731907,0.0419939075844473,0.209763266239695,0.0670560572625704,0.0424328232903923,-0.0405155656969082,-0.068114417219726,-0.0252071402398501,-0.0661932111183543,-0.0708630280357385,-0.0624643072422073,-0.0603168896585852,-0.166808707415439,-0.0222670244498861,-0.131544626487216,-0.124595613678169,-0.201612833654031,-0.184590461779796,-0.139864621487069,-0.141070924656595,0.0760064370743126,0.0744048511128419,0.0603992452248415,0.082460729241627,0.0581297892061354,0.0784733419895506,-0.0215061715668736,0.0867803213875241,-0.0499272333575408,0.163921849550485,-0.071228112723306,-0.0134146527167979,-0.0133367802081363,0.000638460802663133,0.0460901559191884,-0.0692045373751943,-0.0329023978328371,0.0279305234211268,0.118518144600295,0.0875792122027443,0.00224236337239187,-0.0892523580645643,-0.0899262019248294,-0.143185911801971,-0.204893940312751,-0.150965573584756,-0.133037758421751,-0.160326671691389,0.248294152773042,0.351537821911187,0.391724138757373,0.394611487162516,0.25435257272998,0.215442865010692,0.190899917566625,0.106939350069561,0.132159999624258,-0.0319322844787163,-0.0916032572017468,-0.047882129003812,-0.128271310452482,-0.177423768830353,-0.25033584439676,-0.00296674244038427,0.104577702838049,0.109314797048387,0.103562190590822,0.036512173155377,-0.0223431156677912,-0.126403959922475,-0.0524417142302872,-0.0250399847376114,-0.0317961505401509,-0.0528392577521166,-0.0531209416601499,-0.0742336790264955,-0.0529206015813709,-0.0458810483131928,-0.0876952851800661,0.014629163279974,-0.0794972423593033,-0.144799803207665,-0.0611567477618681,-0.0203686707395758,-0.160735650551546,0.0911895880053122,0.188854294440997,0.15527448260714,0.0931999415023341,-0.0192812715873382,0.006452285314631,0.198737085006943,0.146798823829414,0.00297482131993183,-0.110808648235913,-0.0706717538634668,0.0162457408732262,-0.010043022344198,-0.0345394764900672,-0.257606516387479,0.0502512552889584,0.102544458502551,0.0476168969650901,-0.160765968402571,-0.0627144731401611,0.0374450409314647,0.113487117692784,0.017602037834809,-0.055221279234916,-0.140766871148516,-0.0138130989570897,-0.010669242257809,0.126077701665103,-0.0364318594181246,-0.0745588940753461,0.0209239182553216,-0.0764879573342916,0.0146777250598694,-0.046696923992843,0.0327777659593914,0.0644132027365398,-0.0797857336195547,-0.117851403339794,-0.109901866669249,-0.0169039961954154,-0.00715048732679923,-0.00850298759151199,-0.010268206908379,-0.0602433332783882,0.443297203744477,0.136169596933223,0.123188226725256,0.333994471895837,0.354327531541048,0.350363700703669,0.321615366900534,0.461985349626257,0.387825808864233,-0.184220572380486,0.141464994195747,0.0314071356588993,-0.0112368813850175,0.0369927196871835,-0.0717798809604169,-0.0614970339199753,-0.065053575856643,-0.131664387750699,-0.0421076715155686,0.0350303489066306,0.861738793696092,-0.00456109096364513,0.0355480481210255,-0.0188426066381566,0.0329939837041844,0.0427349385214504,0.0102917675146473,0.159508119232992,0.316287038304734,0.443891121302992,0.574900462206666,0.292363911526743,0.0777318792037324,0.0767059774628588,0.188559869713924,0.131131310088854,0.114466584277355,0.246506308379895,0.17806563311906,0.194093973930852,0.239234181922622,0.197577191107945,0.204762500841974,0.195424608055726,0.123777353126119,-0.103977652487145,0.22637508222027,0.317008231197849,0.181470339941716,-0.131205940815055,-0.103243401856086,-0.0195769700551128,-0.0465021097334335,-0.0612887622459727,0.0110973091631507,-0.116567963534728,-0.0525753779719716,-0.0178140264015952,-0.125534479714249,-0.178434643700654,-0.0212894245382483,-0.173805612812454,-0.115178163363345,-0.157070441857134,0.153885618199419,0.222772944094962,0.14191079122272,0.0832108802295127,0.114305246201634,0.0378582641315207,0.0261496526708686,0.0852992916676403,0.0817895703702473,0.0236412930289523,0.0093444852821398,0.0191332338149383,0.0153456710981149,0.00570691380226632,-0.01832770166248,-0.0116616395851138,0.0250908639906986,0.0163367146723467,-0.112146660831165,0.0521558152114487,-0.0123363195655353,-0.0269049889514511,0.0916412216863947,0.0487519626934958,0.0290058476912037,0.0392627969593261,-0.0485950254469977,-0.0297676732759965,0.00348762846338207,0.051077454837667,0.0534710276296428,0.0134485280661204,0.0619857765283969,-0.00564932628325266,0.0086430106567243,0.0558404629448722,-0.00962477308369223,-0.0787191351452085,-0.048921811136903,-0.0210706120286186,-0.0332074622494553
|coexpression_dpi_cluster_scores_median=0.0375608755670962,0.130004032382152,0.281033021353425,0.280440101118034,0.481700818028106,0.328428018479956,0.286557635189855,0.710973191007304,1.06314807561782,1.09726901282033,0.268598993737168,0.235010375921817,0.637217512568403,0.52607781688779,0.346168375568465,0.409434164098256,0.230336981122899,0.288375036098248,0.181481181715087,0.153628809860867,0.202843190349958,0.160520065737983,0.126896544901932,0.120568945209029,0.164001280677683,0,0.217164136762398,0.281068605134295,0.0755555083173967,0.102559445631014,0.106113868463637,0.402781275559994,0.348330097194396,-0.217891157636379,0.186854646304788,0.233677477382315,0.293439016871558,0.284129533353405,0.0328545274455208,0.192138485268782,0.0704560161949009,0.226095853111613,-0.0460154747389491,-0.0979856066219967,-0.137714397396831,-0.0820929378579468,-0.110452585878385,-0.132234899582224,-0.0597179972309624,-0.07523275060547,-0.0656152719105678,-0.196503777499267,0.261164368507224,0.906976666385084,0.723130915252426,-0.0376164682899732,-0.0211439703314005,0.180605254120548,0.0396112267225059,-0.0556462599039697,0.0996891926432054,-0.0911610083947324,-0.0125548252684415,-0.056538173671873,-0.14770596581838,-0.145590261665499,-0.104081418030892,0.0296983395699179,0.101008704733966,0.00613135212999916,0.0112578827334217,0,0.00289808729570643,0,0.114576722657074,0,0,-0.0770495040309167,-0.00987297867870005,-0.0192636842769323,-0.0857882975150397,-0.0357866797836575,-0.110958478856418,-0.00189902384141172,0.00695103335065972,0.164404355430538,0.112314235557565,0.0507629177021335,-0.0416714528352654,0.0316393102377815,0.339469297517699,0,0.225301871178984,-0.217891157636379,-0.217891157636379,-0.217891157636379,-0.0409446908863494,-0.0102213932462893,0.0223567161922301,0,0,-0.217891157636379,0,0,0.0821950724192696,0.0276411508065375,0.0118233567388213,0.0790815312186172,0,-0.104989932216841,0.128788584856808,-0.0185721472569733,-0.106578574432698,-0.0129872858440309,-0.126161815825883,-0.0789572886614646,0,-0.159237660067339,0.258711648274726,0,0.257427465074696,0.308662478005582,-0.102808094834258,0.106020149272984,-0.012189443660045,0.0878530965301466,0.233511199235346,0.211664665120351,0.24244014740763,-0.147796622067043,-0.217891157636379,-0.00616426674919715,0,-0.118999917368329,-0.135900431260843,-0.152594867496869,0,0.0242629656416044,0,0,0.143127679930209,0.141730629811949,0,0.0260205787775887,0.0875779041291412,0.0297586773546034,0.0397093762765671,-0.0367891484367311,0.260819243043063,0.0752205997629372,0,0.0271438655432583,0,-0.127754602599888,-0.0302263685977356,0.0494408181221955,0.013122793103794,0.307365864513145,0,0.0442045409892775,-0.0508539533979022,-0.0583569422113775,-0.0260773000258686,-0.0586970764706348,-0.0570042484875736,-0.0520334077909978,-0.0662723957370277,-0.0181834944045928,0,-0.151875700093774,-0.0959128991177773,-0.158630758279182,-0.217891157636379,-0.0312665501634701,-0.205321616333405,0.110886007419942,0.00243600181469472,0,0.050020119881318,0.0117164658278293,0.099589119834654,-0.0707198824639183,0.150259607730125,-0.083149135620407,0.168653336497203,-0.151677471928849,0.0802735350111586,-0.0146217544445153,0,0.0605925045443182,-0.0618644126816609,0,0.0120180914767464,0.130591179741954,0,0,-0.126852961129989,-0.0244641731472753,-0.0781948838780859,-0.158096777706843,-0.0992966333441327,-0.0811098912059037,-0.217891157636379,0.283029214221943,0.457394053892254,0.465395119113709,0.55064652736009,0.248890081110306,0.184843839494425,0.261233784769061,0.121646958252904,0.0430584872737469,0,-0.0569186139688614,-0.0437015346821331,-0.0403091368269032,-0.217891157636379,-0.217891157636379,0,0.0271192265094964,0.112675775953085,0.0489812572660646,0,-0.0259580961092756,-0.161320722131046,0.0326592577351737,-0.0398155090002644,0,-0.0976761488923165,-0.0442417108205988,-0.0739912427850625,-0.0196200951567507,0,-0.0451946979038192,0,-0.112062012570769,-0.153227080941247,-0.017571974248074,-0.0441791469231764,-0.0403714369737938,0.0713687520224996,0.190646431025751,0.142425837495113,0.0734499805260924,0,0,0.262698313778165,0.118373086023396,0.0821518315602435,-0.0968827162668933,-0.0226114836047585,0.0156791660863825,0,-0.0432760034049798,-0.217891157636379,0,0.114718896326828,0.0722633708975463,-0.217891157636379,-0.0866724177642534,-0.0369466359841109,0.102380035304511,0.0158648760182248,0,-0.204409455809169,0,0,0.100248707508042,-0.0338176819645478,-0.0901247649862013,0.00495979404673264,-0.0853952853631819,0.0428347824964432,-0.102458743506867,0.0135822874443037,0.083442441818608,-0.108013931830133,-0.135663052383004,-0.0463421780249995,0.0254340553719351,-0.0294793051892587,0.00131695638537893,-0.0350893958261201,-0.0367130348894295,0.592870002812621,0.150072612586664,0.0737896374598673,0.319775585523046,0.33807225923373,0.35559986840195,0.340414171277051,0.47119197804368,0.401434957574071,-0.217891157636379,0.137242997855494,0,0,0,-0.0832250313441657,-0.114180223940596,0,-0.217891157636379,-0.0752374030452373,0,0.829246306698697,-0.0172407240710035,0.0439169027153164,0,-0.00151433255216721,0.00633737824513375,-0.0493818608885072,0.135718295193111,0.287829438083198,0.4237988260176,0.519071590897344,0.278289373329439,0.147815532899656,0.0708833152179796,0.190551824158026,0.059748646041804,0.160646546089734,0.273089362984173,0.242169968966479,0.178945397425788,0.215751966338564,0.142152605971481,0.19996001625447,0.197906332095909,0.18950204091621,-0.0554878441341933,0.225510723467452,0.359730400448592,0.151895390509174,-0.141181700470746,-0.166539396328476,-0.027712225514488,-0.0629389393497536,-0.0413449662010621,-0.0234456859951938,-0.217891157636379,0,0.0688732037536692,-0.158712281506368,-0.217891157636379,0.153185020918724,-0.217891157636379,0,-0.0366879654594036,0.153035400775345,0.217086954229878,0.0884055216547965,0.0771097521947871,0.0934527506362907,0.0215019372301756,0.00397674830571862,0.0628745498392063,0.104625221556683,0.0931228151677642,0.0496902807597824,0,0,-0.00298070767975633,-0.0207885755067549,0,0,0.0185265888241125,-0.118548824857115,0.00797482188193399,0,0,0,0.0593496653901852,0.0390607415003592,0.0483749045776028,-0.0632988162442457,0,-0.0153762398856283,0,0.0523841583706756,0.0408018333703219,0.0418130931130296,0,0,0.0968441960560167,0.0130160411230153,-0.00182739595984779,-0.0772019352807364,0,-0.0471938858301569
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 13:19, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr13:46823281..46823295,-p4@Nup153
Mm9::chr16:91688954..91689019,-p1@Donson
Mm9::chr5:121063152..121063161,+p@chr5:121063152..121063161
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:2850&oldid=2152136"