FFCP PHASE1:Mm9::chr13:110693906..110693924,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:110693906..110693924,- | |id=chr13:110693906..110693924,- | ||
|ontology_enrichment_celltype=CL:0000791!5.80e-25!9;CL:0000789!5.80e-25!9;CL:0002420!5.80e-25!9;CL:0002419!5.80e-25!9;CL:0000790!5.80e-25!9;CL:0000838!1.14e-22!12;CL:0002031!1.25e-22!25;CL:0000624!1.49e-22!8;CL:0000542!9.27e-21!13;CL:0000051!9.27e-21!13;CL:0000084!4.28e-20!11;CL:0000827!4.28e-20!11;CL:0000893!3.44e-17!6;CL:0002489!3.44e-17!6;CL:0000898!3.44e-17!6;CL:0000809!3.44e-17!6;CL:0000810!3.44e-17!6;CL:0000895!3.44e-17!6;CL:0000808!3.44e-17!6;CL:0000894!3.44e-17!6;CL:0000806!3.44e-17!6;CL:0000807!3.44e-17!6;CL:0000805!3.44e-17!6;CL:0002425!3.44e-17!6;CL:0002436!3.44e-17!6;CL:0002427!3.44e-17!6;CL:0002428!3.44e-17!6;CL:0002429!3.44e-17!6;CL:0002433!3.44e-17!6;CL:0002431!3.44e-17!6;CL:0002432!3.44e-17!6;CL:0000988!6.73e-17!32;CL:0002032!6.73e-17!32;CL:0000037!6.73e-17!32;CL:0000566!6.73e-17!32;CL:0000837!6.73e-17!32;CL:0000738!2.27e-15!17;CL:0002087!2.27e-15!17;CL:0000553!2.19e-11!6;CL:0000556!2.19e-11!6;CL:0002320!1.10e-10!46;CL:0000134!1.10e-10!46;CL:0000219!1.35e-08!54;CL:0000050!1.84e-07!9 | |ontology_enrichment_celltype=CL:0000791!5.80e-25!9;CL:0000789!5.80e-25!9;CL:0002420!5.80e-25!9;CL:0002419!5.80e-25!9;CL:0000790!5.80e-25!9;CL:0000838!1.14e-22!12;CL:0002031!1.25e-22!25;CL:0000624!1.49e-22!8;CL:0000542!9.27e-21!13;CL:0000051!9.27e-21!13;CL:0000084!4.28e-20!11;CL:0000827!4.28e-20!11;CL:0000893!3.44e-17!6;CL:0002489!3.44e-17!6;CL:0000898!3.44e-17!6;CL:0000809!3.44e-17!6;CL:0000810!3.44e-17!6;CL:0000895!3.44e-17!6;CL:0000808!3.44e-17!6;CL:0000894!3.44e-17!6;CL:0000806!3.44e-17!6;CL:0000807!3.44e-17!6;CL:0000805!3.44e-17!6;CL:0002425!3.44e-17!6;CL:0002436!3.44e-17!6;CL:0002427!3.44e-17!6;CL:0002428!3.44e-17!6;CL:0002429!3.44e-17!6;CL:0002433!3.44e-17!6;CL:0002431!3.44e-17!6;CL:0002432!3.44e-17!6;CL:0000988!6.73e-17!32;CL:0002032!6.73e-17!32;CL:0000037!6.73e-17!32;CL:0000566!6.73e-17!32;CL:0000837!6.73e-17!32;CL:0000738!2.27e-15!17;CL:0002087!2.27e-15!17;CL:0000553!2.19e-11!6;CL:0000556!2.19e-11!6;CL:0002320!1.10e-10!46;CL:0000134!1.10e-10!46;CL:0000219!1.35e-08!54;CL:0000050!1.84e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.53e-56,9;CL:0000789,2.53e-56,9;CL:0002420,2.53e-56,9;CL:0002419,2.53e-56,9;CL:0000790,2.53e-56,9;CL:0000838,4.89e-52,12;CL:0000624,1.19e-50,8;CL:0000542,5.68e-48,13;CL:0000051,5.68e-48,13;CL:0000084,5.80e-46,11;CL:0000827,5.80e-46,11;CL:0002031,1.91e-41,25;CL:0000893,4.77e-38,6;CL:0002489,4.77e-38,6;CL:0000898,4.77e-38,6;CL:0000809,4.77e-38,6;CL:0000810,4.77e-38,6;CL:0000895,4.77e-38,6;CL:0000808,4.77e-38,6;CL:0000894,4.77e-38,6;CL:0000806,4.77e-38,6;CL:0000807,4.77e-38,6;CL:0000805,4.77e-38,6;CL:0002425,4.77e-38,6;CL:0002436,4.77e-38,6;CL:0002427,4.77e-38,6;CL:0002428,4.77e-38,6;CL:0002429,4.77e-38,6;CL:0002433,4.77e-38,6;CL:0002431,4.77e-38,6;CL:0002432,4.77e-38,6;CL:0000738,1.74e-36,17;CL:0002087,1.74e-36,17;CL:0000988,3.95e-32,32;CL:0002032,3.95e-32,32;CL:0000037,3.95e-32,32;CL:0000837,3.95e-32,32;CL:0002320,5.55e-22,46;CL:0000134,5.55e-22,46;CL:0000219,1.55e-18,54;CL:0000034,2.05e-11,97;CL:0000723,1.96e-10,91;CL:0000048,1.96e-10,91;CL:0000553,7.26e-10,6;CL:0000556,7.26e-10,6;CL:0000815,6.29e-08,1;CL:0000792,6.29e-08,1;CL:0000945,8.50e-08,1;CL:0000236,8.50e-08,1;CL:0000826,8.50e-08,1;CL:0000625,3.16e-07,1;CL:0000050,9.50e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.74e-20!48;UBERON:0002390!3.28e-19!45;UBERON:0003061!3.28e-19!45;UBERON:0004177!4.15e-17!29;UBERON:0002370!4.30e-14!23;UBERON:0000974!4.30e-14!23;UBERON:0004807!4.30e-14!23;UBERON:0005058!4.30e-14!23;UBERON:0003351!4.30e-14!23;UBERON:0009113!4.30e-14!23;UBERON:0003295!4.30e-14!23;UBERON:0009722!4.30e-14!23;UBERON:0005562!4.30e-14!23;UBERON:0007690!4.30e-14!23;UBERON:0006562!2.12e-13!24;UBERON:0003408!2.12e-13!24;UBERON:0001557!2.12e-13!24;UBERON:0001042!2.12e-13!24;UBERON:0008814!2.12e-13!24;UBERON:0009145!2.12e-13!24;UBERON:0002405!4.92e-12!70;UBERON:0000072!1.25e-11!27;UBERON:0002384!1.10e-10!46;UBERON:0003081!1.36e-08!88;UBERON:0000063!2.09e-08!35;UBERON:0005057!2.61e-08!51;UBERON:0000065!7.98e-07!41 | |ontology_enrichment_uberon=UBERON:0002193!9.74e-20!48;UBERON:0002390!3.28e-19!45;UBERON:0003061!3.28e-19!45;UBERON:0004177!4.15e-17!29;UBERON:0002370!4.30e-14!23;UBERON:0000974!4.30e-14!23;UBERON:0004807!4.30e-14!23;UBERON:0005058!4.30e-14!23;UBERON:0003351!4.30e-14!23;UBERON:0009113!4.30e-14!23;UBERON:0003295!4.30e-14!23;UBERON:0009722!4.30e-14!23;UBERON:0005562!4.30e-14!23;UBERON:0007690!4.30e-14!23;UBERON:0006562!2.12e-13!24;UBERON:0003408!2.12e-13!24;UBERON:0001557!2.12e-13!24;UBERON:0001042!2.12e-13!24;UBERON:0008814!2.12e-13!24;UBERON:0009145!2.12e-13!24;UBERON:0002405!4.92e-12!70;UBERON:0000072!1.25e-11!27;UBERON:0002384!1.10e-10!46;UBERON:0003081!1.36e-08!88;UBERON:0000063!2.09e-08!35;UBERON:0005057!2.61e-08!51;UBERON:0000065!7.98e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.55e-22,46;UBERON:0002390,1.79e-10,45;UBERON:0003061,1.79e-10,45;UBERON:0002193,9.28e-10,48;UBERON:0002405,9.28e-10,48;UBERON:0002370,9.59e-10,23;UBERON:0000974,9.59e-10,23;UBERON:0004807,9.59e-10,23;UBERON:0005058,9.59e-10,23;UBERON:0003351,9.59e-10,23;UBERON:0009113,9.59e-10,23;UBERON:0003295,9.59e-10,23;UBERON:0009722,9.59e-10,23;UBERON:0005562,9.59e-10,23;UBERON:0007690,9.59e-10,23;UBERON:0006562,2.52e-09,24;UBERON:0003408,2.52e-09,24;UBERON:0001557,2.52e-09,24;UBERON:0001042,2.52e-09,24;UBERON:0008814,2.52e-09,24;UBERON:0009145,2.52e-09,24;UBERON:0000072,3.00e-08,27;UBERON:0004177,1.18e-07,29;UBERON:0005057,1.18e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,9.85521055061667,17.3207749478275,2.22583358693156,2.23362045186942,1.02720437958723,2.27293046289393,0.999329285446988,0.404950534779652,0,1.26184866143295,1.91960207048034,1.27316895539409,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.87369970324729,9.85521055061667,17.3207749478275,2.22583358693156,2.23362045186942,1.02720437958723,2.27293046289393,0.999329285446988,0.404950534779652,0,1.26184866143295,1.91960207048034,1.27316895539409,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:110693906..110693924,- | |short_description=p@chr13:110693906..110693924,- | ||
}} | }} |
Revision as of 12:51, 13 November 2012
Short description: | p@chr13:110693906..110693924, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:110693906..110693924, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.55e-22 | 46 |
hematopoietic system | 1.79e-10 | 45 |
blood island | 1.79e-10 | 45 |
hemolymphoid system | 9.28e-10 | 48 |
immune system | 9.28e-10 | 48 |
thymus | 9.59e-10 | 23 |
neck | 9.59e-10 | 23 |
respiratory system epithelium | 9.59e-10 | 23 |
hemolymphoid system gland | 9.59e-10 | 23 |
pharyngeal epithelium | 9.59e-10 | 23 |
thymic region | 9.59e-10 | 23 |
pharyngeal gland | 9.59e-10 | 23 |
entire pharyngeal arch endoderm | 9.59e-10 | 23 |
thymus primordium | 9.59e-10 | 23 |
early pharyngeal endoderm | 9.59e-10 | 23 |
pharynx | 2.52e-09 | 24 |
gland of gut | 2.52e-09 | 24 |
upper respiratory tract | 2.52e-09 | 24 |
chordate pharynx | 2.52e-09 | 24 |
pharyngeal arch system | 2.52e-09 | 24 |
pharyngeal region of foregut | 2.52e-09 | 24 |
segment of respiratory tract | 3.00e-08 | 27 |
hemopoietic organ | 1.18e-07 | 29 |
immune organ | 1.18e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.