FFCP PHASE1:Mm9::chr3:122574491..122574500,-: Difference between revisions
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|id=chr3:122574491..122574500,- | |id=chr3:122574491..122574500,- | ||
|ontology_enrichment_celltype=CL:0000473!1.77e-12!3;CL:0000627!1.77e-12!3;CL:0000682!1.77e-12!3;CL:0000239!1.01e-10!6;CL:0000677!1.01e-10!6;CL:0000212!1.01e-10!6;CL:0000584!1.01e-10!6;CL:0000075!3.30e-09!7;CL:0002563!3.52e-07!9;CL:0002251!3.52e-07!9;CL:0000066!6.13e-07!25 | |ontology_enrichment_celltype=CL:0000473!1.77e-12!3;CL:0000627!1.77e-12!3;CL:0000682!1.77e-12!3;CL:0000239!1.01e-10!6;CL:0000677!1.01e-10!6;CL:0000212!1.01e-10!6;CL:0000584!1.01e-10!6;CL:0000075!3.30e-09!7;CL:0002563!3.52e-07!9;CL:0002251!3.52e-07!9;CL:0000066!6.13e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.50e-10,6;CL:0000677,1.50e-10,6;CL:0000584,1.50e-10,6;CL:0000682,5.56e-10,3;CL:0000075,3.99e-09,7;CL:0002563,3.25e-07,9;CL:0002251,3.25e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.54e-20!15;UBERON:0000160!2.94e-18!43;UBERON:0001242!1.94e-14!13;UBERON:0000060!1.94e-14!13;UBERON:0001262!1.94e-14!13;UBERON:0004786!1.94e-14!13;UBERON:0005409!1.45e-12!59;UBERON:0004923!5.60e-12!24;UBERON:0001962!2.95e-08!2;UBERON:0001961!2.95e-08!2;UBERON:0001744!2.95e-08!2;UBERON:0003350!3.52e-07!9;UBERON:0004808!3.52e-07!9;UBERON:0001277!3.52e-07!9;UBERON:0001007!8.03e-07!128;UBERON:0001555!8.03e-07!128;UBERON:0007026!8.03e-07!128 | |ontology_enrichment_uberon=UBERON:0000344!5.54e-20!15;UBERON:0000160!2.94e-18!43;UBERON:0001242!1.94e-14!13;UBERON:0000060!1.94e-14!13;UBERON:0001262!1.94e-14!13;UBERON:0004786!1.94e-14!13;UBERON:0005409!1.45e-12!59;UBERON:0004923!5.60e-12!24;UBERON:0001962!2.95e-08!2;UBERON:0001961!2.95e-08!2;UBERON:0001744!2.95e-08!2;UBERON:0003350!3.52e-07!9;UBERON:0004808!3.52e-07!9;UBERON:0001277!3.52e-07!9;UBERON:0001007!8.03e-07!128;UBERON:0001555!8.03e-07!128;UBERON:0007026!8.03e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.76e-25,31;UBERON:0001242,1.87e-18,13;UBERON:0001262,1.87e-18,13;UBERON:0004786,1.87e-18,13;UBERON:0005409,1.79e-16,47;UBERON:0000344,5.71e-16,15;UBERON:0000331,4.52e-10,3;UBERON:0002116,4.52e-10,3;UBERON:0001204,4.52e-10,3;UBERON:0001168,4.52e-10,3;UBERON:0004923,6.87e-10,24;UBERON:0002108,9.02e-08,4;UBERON:0003350,3.25e-07,9;UBERON:0004808,3.25e-07,9;UBERON:0001277,3.25e-07,9 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,1.72269589234506,0.430761996159075,1.72376986148711,1.14014051673824,4.78857246543868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.58670339998127,0,0,0,0,0.22237804384487,0,1.89811624617805,0,0,0,0,0.898819408654221,3.24207074812041,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,1.72269589234506,0.430761996159075,1.72376986148711,1.14014051673824,4.78857246543868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.58670339998127,0,0,0,0,0.22237804384487,0,1.89811624617805,0,0,0,0,0.898819408654221,3.24207074812041,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:122574491..122574500,- | |short_description=p@chr3:122574491..122574500,- | ||
}} | }} |
Revision as of 03:26, 14 November 2012
Short description: | p@chr3:122574491..122574500, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:122574491..122574500, - |
Coexpression cluster: | MCL_coexpression_mm9:1529 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.50e-10 | 6 |
gut absorptive cell | 1.50e-10 | 6 |
enterocyte | 1.50e-10 | 6 |
M cell of gut | 5.56e-10 | 3 |
columnar/cuboidal epithelial cell | 3.99e-09 | 7 |
intestinal epithelial cell | 3.25e-07 | 9 |
epithelial cell of alimentary canal | 3.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.76e-25 | 31 |
intestinal mucosa | 1.87e-18 | 13 |
wall of intestine | 1.87e-18 | 13 |
gastrointestinal system mucosa | 1.87e-18 | 13 |
gastrointestinal system | 1.79e-16 | 47 |
mucosa | 5.71e-16 | 15 |
ileal mucosa | 4.52e-10 | 3 |
ileum | 4.52e-10 | 3 |
mucosa of small intestine | 4.52e-10 | 3 |
wall of small intestine | 4.52e-10 | 3 |
organ component layer | 6.87e-10 | 24 |
small intestine | 9.02e-08 | 4 |
epithelium of mucosa | 3.25e-07 | 9 |
gastrointestinal system epithelium | 3.25e-07 | 9 |
intestinal epithelium | 3.25e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.