FFCP PHASE1:Mm9::chr19:32712104..32712150,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:32712104..32712150,+|id=chr19:32712104..32712150,+|ontology_enrichment_celltype=CL:0000181!1.01e-08!5;CL:0000417!1.01e-08!5;CL:0000668!1.01e-08!5;CL:0000412!1.01e-08!5;CL:0000182!1.01e-08!5|ontology_enrichment_celltype_v019_2=CL:0000057,6.50e-14,1;CL:0000632,6.50e-14,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.12e-27!22;UBERON:0007499!1.12e-27!22;UBERON:0006925!1.12e-27!22;UBERON:0009497!1.12e-27!22;UBERON:0000015!1.12e-27!22;UBERON:0002423!1.12e-27!22;UBERON:0006235!1.12e-27!22;UBERON:0008835!1.12e-27!22;UBERON:0003894!1.12e-27!22;UBERON:0004161!1.12e-27!22;UBERON:0008836!1.12e-27!22;UBERON:0009854!2.61e-26!23;UBERON:0009856!2.61e-26!23;UBERON:0002365!6.69e-24!25;UBERON:0002330!6.69e-24!25;UBERON:0005256!1.41e-12!47;UBERON:0003914!2.09e-12!47;UBERON:0005172!8.66e-12!49;UBERON:0005173!8.66e-12!49;UBERON:0002417!8.66e-12!49;UBERON:0000916!8.66e-12!49;UBERON:0005057!8.13e-10!51;UBERON:0002405!1.50e-09!70;UBERON:0003929!7.69e-09!55;UBERON:0000490!7.64e-08!66;UBERON:0002368!8.30e-08!60;UBERON:0009569!9.16e-08!66;UBERON:0002530!6.15e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.36e-09,22;UBERON:0007499,1.36e-09,22;UBERON:0006925,1.36e-09,22;UBERON:0009497,1.36e-09,22;UBERON:0000015,1.36e-09,22;UBERON:0002423,1.36e-09,22;UBERON:0006235,1.36e-09,22;UBERON:0008835,1.36e-09,22;UBERON:0003894,1.36e-09,22;UBERON:0004161,1.36e-09,22;UBERON:0008836,1.36e-09,22;UBERON:0009854,3.41e-09,23;UBERON:0009856,3.41e-09,23;UBERON:0002365,1.71e-08,25;UBERON:0002330,1.71e-08,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,2.05878325691772,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.592905254174298,0,0.196558995113203,0,0.405720242777006,0,0.25462585178142,0,6.16113861745134,0.823684239564244,0,0.744281895337007,0.312037673114561,1.01031551178845,1.4351793081753,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr19:32712104..32712150,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:32712104..32712150,+ | |||
|id=chr19:32712104..32712150,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.01e-08!5;CL:0000417!1.01e-08!5;CL:0000668!1.01e-08!5;CL:0000412!1.01e-08!5;CL:0000182!1.01e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.50e-14,1;CL:0000632,6.50e-14,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.12e-27!22;UBERON:0007499!1.12e-27!22;UBERON:0006925!1.12e-27!22;UBERON:0009497!1.12e-27!22;UBERON:0000015!1.12e-27!22;UBERON:0002423!1.12e-27!22;UBERON:0006235!1.12e-27!22;UBERON:0008835!1.12e-27!22;UBERON:0003894!1.12e-27!22;UBERON:0004161!1.12e-27!22;UBERON:0008836!1.12e-27!22;UBERON:0009854!2.61e-26!23;UBERON:0009856!2.61e-26!23;UBERON:0002365!6.69e-24!25;UBERON:0002330!6.69e-24!25;UBERON:0005256!1.41e-12!47;UBERON:0003914!2.09e-12!47;UBERON:0005172!8.66e-12!49;UBERON:0005173!8.66e-12!49;UBERON:0002417!8.66e-12!49;UBERON:0000916!8.66e-12!49;UBERON:0005057!8.13e-10!51;UBERON:0002405!1.50e-09!70;UBERON:0003929!7.69e-09!55;UBERON:0000490!7.64e-08!66;UBERON:0002368!8.30e-08!60;UBERON:0009569!9.16e-08!66;UBERON:0002530!6.15e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.36e-09,22;UBERON:0007499,1.36e-09,22;UBERON:0006925,1.36e-09,22;UBERON:0009497,1.36e-09,22;UBERON:0000015,1.36e-09,22;UBERON:0002423,1.36e-09,22;UBERON:0006235,1.36e-09,22;UBERON:0008835,1.36e-09,22;UBERON:0003894,1.36e-09,22;UBERON:0004161,1.36e-09,22;UBERON:0008836,1.36e-09,22;UBERON:0009854,3.41e-09,23;UBERON:0009856,3.41e-09,23;UBERON:0002365,1.71e-08,25;UBERON:0002330,1.71e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,2.05878325691772,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.592905254174298,0,0.196558995113203,0,0.405720242777006,0,0.25462585178142,0,6.16113861745134,0.823684239564244,0,0.744281895337007,0.312037673114561,1.01031551178845,1.4351793081753,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:32712104..32712150,+ | |||
}} |
Revision as of 17:23, 13 September 2013
Short description: | p@chr19:32712104..32712150, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:32712104..32712150, + |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.50e-14 | 1 |
hepatic stellate cell | 6.50e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.36e-09 | 22 |
epithelial sac | 1.36e-09 | 22 |
digestive gland | 1.36e-09 | 22 |
epithelium of foregut-midgut junction | 1.36e-09 | 22 |
anatomical boundary | 1.36e-09 | 22 |
hepatobiliary system | 1.36e-09 | 22 |
foregut-midgut junction | 1.36e-09 | 22 |
hepatic diverticulum | 1.36e-09 | 22 |
liver primordium | 1.36e-09 | 22 |
septum transversum | 1.36e-09 | 22 |
liver bud | 1.36e-09 | 22 |
digestive tract diverticulum | 3.41e-09 | 23 |
sac | 3.41e-09 | 23 |
exocrine gland | 1.71e-08 | 25 |
exocrine system | 1.71e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.