FFCP PHASE1:Mm9::chr5:67489910..67489925,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=114|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:67489910..67489925,+|id=chr5:67489910..67489925,+|ontology_enrichment_celltype=CL:0000107!1.16e-11!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.05e-22,9;CL:0000540,7.27e-07,33;CL:0000047,7.27e-07,33;CL:0000031,7.27e-07,33;CL:0000404,7.27e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.16e-11!9;UBERON:0002342!2.06e-10!10;UBERON:0005062!2.06e-10!10;UBERON:0000010!5.63e-09!11;UBERON:0002369!4.58e-07!7;UBERON:0006858!4.58e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.05e-22,9;UBERON:0000010,9.82e-18,11;UBERON:0005409,3.48e-10,47;UBERON:0002369,5.61e-10,7;UBERON:0006858,5.61e-10,7;UBERON:0000013,1.23e-08,3;UBERON:0010313,1.72e-08,3;UBERON:0002342,1.72e-08,3;UBERON:0002005,1.72e-08,3;UBERON:0005428,1.72e-08,3;UBERON:0005062,1.72e-08,3;UBERON:0000011,3.48e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,2.3750742250372,1.21439728736295,1.82679286987285,1.15307748628029,1.95939432718409,1.76383060703557,0.502666365318702,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13288250535234,4.87697010906921,6.70110798874885,3.42861991859682,3.55804870151792,3.42406127002606,0.949058123089023,2.79988223030818,2.5133520880027,1.59165177632921,1.55971269695296,0,0.648414149624083,0,0,0.685491075658373,0,0,0,0.280543279561274,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.937693492737625,0,0,18.2994767261429,13.2749173060857,40.9304455692318,5.9742199488138,12.6995244226965,15.0030561318081,17.4068601720205,41.5003318234063,45.4580944638502,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,1.03371317267288,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,3.32152793260192,6.91286188231286,7.34436317588249,5.64538399239065,6.33251434863915,2.69728692769641,3.05817786183743,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,2.39414924040619,0.170733605754134,0.243106717068294,1.67690530102386,0.919217542250071,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.749132059759059,0.832326981263301,0.402048282689293,1.90517476513229,1.27472758539341,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.73171189149109,0.789209134313529,0.679020569229309,1.68342681497322,0.474540072496697,0.591026894253381,0.409231043169689,0.464810523557898,0.964533054905707,0.999242311751784,0.701794825336225,0.214871054048298,0.382576664137687,0,0|short_description=p@chr5:67489910..67489925,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:67489910..67489925,+ | |||
|id=chr5:67489910..67489925,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.16e-11!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.05e-22,9;CL:0000540,7.27e-07,33;CL:0000047,7.27e-07,33;CL:0000031,7.27e-07,33;CL:0000404,7.27e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.16e-11!9;UBERON:0002342!2.06e-10!10;UBERON:0005062!2.06e-10!10;UBERON:0000010!5.63e-09!11;UBERON:0002369!4.58e-07!7;UBERON:0006858!4.58e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.05e-22,9;UBERON:0000010,9.82e-18,11;UBERON:0005409,3.48e-10,47;UBERON:0002369,5.61e-10,7;UBERON:0006858,5.61e-10,7;UBERON:0000013,1.23e-08,3;UBERON:0010313,1.72e-08,3;UBERON:0002342,1.72e-08,3;UBERON:0002005,1.72e-08,3;UBERON:0005428,1.72e-08,3;UBERON:0005062,1.72e-08,3;UBERON:0000011,3.48e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,2.3750742250372,1.21439728736295,1.82679286987285,1.15307748628029,1.95939432718409,1.76383060703557,0.502666365318702,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13288250535234,4.87697010906921,6.70110798874885,3.42861991859682,3.55804870151792,3.42406127002606,0.949058123089023,2.79988223030818,2.5133520880027,1.59165177632921,1.55971269695296,0,0.648414149624083,0,0,0.685491075658373,0,0,0,0.280543279561274,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.937693492737625,0,0,18.2994767261429,13.2749173060857,40.9304455692318,5.9742199488138,12.6995244226965,15.0030561318081,17.4068601720205,41.5003318234063,45.4580944638502,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,1.03371317267288,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,3.32152793260192,6.91286188231286,7.34436317588249,5.64538399239065,6.33251434863915,2.69728692769641,3.05817786183743,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,2.39414924040619,0.170733605754134,0.243106717068294,1.67690530102386,0.919217542250071,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.749132059759059,0.832326981263301,0.402048282689293,1.90517476513229,1.27472758539341,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.73171189149109,0.789209134313529,0.679020569229309,1.68342681497322,0.474540072496697,0.591026894253381,0.409231043169689,0.464810523557898,0.964533054905707,0.999242311751784,0.701794825336225,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr5:67489910..67489925,+ | |||
}} |
Revision as of 07:55, 14 September 2013
Short description: | p@chr5:67489910..67489925, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:67489910..67489925, + |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.05e-22 | 9 |
neuron | 7.27e-07 | 33 |
neuronal stem cell | 7.27e-07 | 33 |
neuroblast | 7.27e-07 | 33 |
electrically signaling cell | 7.27e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 4.05e-22 | 9 |
peripheral nervous system | 9.82e-18 | 11 |
gastrointestinal system | 3.48e-10 | 47 |
adrenal gland | 5.61e-10 | 7 |
adrenal/interrenal gland | 5.61e-10 | 7 |
sympathetic nervous system | 1.23e-08 | 3 |
neural crest-derived structure | 1.72e-08 | 3 |
neural crest | 1.72e-08 | 3 |
enteric nervous system | 1.72e-08 | 3 |
vagal neural crest | 1.72e-08 | 3 |
neural fold | 1.72e-08 | 3 |
parasympathetic nervous system | 3.48e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.