FFCP PHASE1:Mm9::chr13:113352237..113352245,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=444|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:113352237..113352245,-|id=chr13:113352237..113352245,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,3.45e-20,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!1.86e-09!6;UBERON:0000014!2.48e-07!5;UBERON:0001003!2.48e-07!5;UBERON:0002097!2.48e-07!5;UBERON:0002199!2.48e-07!5;UBERON:0007029!2.48e-07!5;UBERON:0007376!2.48e-07!5;UBERON:0002416!2.48e-07!5;UBERON:0007383!2.48e-07!5;UBERON:0002950!9.32e-07!4;UBERON:0001891!9.32e-07!4;UBERON:0009616!9.32e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.45e-20,3;UBERON:0009663,3.45e-20,3;UBERON:0009661,3.45e-20,3;UBERON:0000125,3.45e-20,3;UBERON:0002308,3.45e-20,3;UBERON:0002950,2.65e-15,4;UBERON:0001891,2.65e-15,4;UBERON:0009616,2.65e-15,4;UBERON:0010286,2.65e-15,4;UBERON:0001896,2.26e-13,2;UBERON:0002298,2.26e-13,2;UBERON:0005290,2.26e-13,2;UBERON:0010096,2.26e-13,2;UBERON:0002420,6.37e-08,8;UBERON:0007245,6.37e-08,8;UBERON:0010009,6.37e-08,8;UBERON:0010011,6.37e-08,8;UBERON:0000454,6.37e-08,8;UBERON:0006834,9.86e-08,1;UBERON:0005795,2.57e-07,4;UBERON:0000995,2.57e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,0,0,0,1.3959149950069,3.37657566019008,3.81995619442025,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93155722413313,1.12385412991454,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,2.80306630000516,11.4639742954093,0.904693873922338,0.238744688006273,0.164140899745061,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58678619322877,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,1.68914227906064,1.64836461840539,0.428736758158132,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.44449345560323,1.03017528619447,0,0,0.50695859978048,0,0.0936415074698824,0.448176066834085,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,1.07435527024149,0.57386499620653,0.220591419119515,0|short_description=p@chr13:113352237..113352245,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=444 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:113352237..113352245,- | |||
|id=chr13:113352237..113352245,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,3.45e-20,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.86e-09!6;UBERON:0000014!2.48e-07!5;UBERON:0001003!2.48e-07!5;UBERON:0002097!2.48e-07!5;UBERON:0002199!2.48e-07!5;UBERON:0007029!2.48e-07!5;UBERON:0007376!2.48e-07!5;UBERON:0002416!2.48e-07!5;UBERON:0007383!2.48e-07!5;UBERON:0002950!9.32e-07!4;UBERON:0001891!9.32e-07!4;UBERON:0009616!9.32e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.45e-20,3;UBERON:0009663,3.45e-20,3;UBERON:0009661,3.45e-20,3;UBERON:0000125,3.45e-20,3;UBERON:0002308,3.45e-20,3;UBERON:0002950,2.65e-15,4;UBERON:0001891,2.65e-15,4;UBERON:0009616,2.65e-15,4;UBERON:0010286,2.65e-15,4;UBERON:0001896,2.26e-13,2;UBERON:0002298,2.26e-13,2;UBERON:0005290,2.26e-13,2;UBERON:0010096,2.26e-13,2;UBERON:0002420,6.37e-08,8;UBERON:0007245,6.37e-08,8;UBERON:0010009,6.37e-08,8;UBERON:0010011,6.37e-08,8;UBERON:0000454,6.37e-08,8;UBERON:0006834,9.86e-08,1;UBERON:0005795,2.57e-07,4;UBERON:0000995,2.57e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,0,0,0,1.3959149950069,3.37657566019008,3.81995619442025,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93155722413313,1.12385412991454,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,2.80306630000516,11.4639742954093,0.904693873922338,0.238744688006273,0.164140899745061,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58678619322877,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,1.68914227906064,1.64836461840539,0.428736758158132,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.44449345560323,1.03017528619447,0,0,0.50695859978048,0,0.0936415074698824,0.448176066834085,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,1.07435527024149,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr13:113352237..113352245,- | |||
}} |
Revision as of 23:54, 12 September 2013
Short description: | p@chr13:113352237..113352245, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:113352237..113352245, - |
Coexpression cluster: | MCL_coexpression_mm9:444 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 3.45e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.45e-20 | 3 |
telencephalic nucleus | 3.45e-20 | 3 |
midbrain nucleus | 3.45e-20 | 3 |
neural nucleus | 3.45e-20 | 3 |
nucleus of brain | 3.45e-20 | 3 |
regional part of midbrain | 2.65e-15 | 4 |
midbrain | 2.65e-15 | 4 |
presumptive midbrain | 2.65e-15 | 4 |
midbrain neural tube | 2.65e-15 | 4 |
medulla oblongata | 2.26e-13 | 2 |
brainstem | 2.26e-13 | 2 |
myelencephalon | 2.26e-13 | 2 |
future myelencephalon | 2.26e-13 | 2 |
basal ganglion | 6.37e-08 | 8 |
nuclear complex of neuraxis | 6.37e-08 | 8 |
aggregate regional part of brain | 6.37e-08 | 8 |
collection of basal ganglia | 6.37e-08 | 8 |
cerebral subcortex | 6.37e-08 | 8 |
uterus or analog | 9.86e-08 | 1 |
embryonic uterus | 2.57e-07 | 4 |
uterus | 2.57e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.