FFCP PHASE1:Mm9::chr1:99666645..99666676,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227399|HGNC=|MCL_coexpression_id=0|UniProt=E9PWR1,Q6ZQB6|association_with_transcript=0bp_to_NM_173760,uc007cfk.2,uc007cfl.1_5end|description=CAGE_peak_2_at_Ppip5k2_5end|id=chr1:99666645..99666676,-|ontology_enrichment_celltype=CL:0000117!4.49e-11!23;CL:0000337!4.49e-11!23;CL:0000540!8.79e-10!33;CL:0000047!8.79e-10!33;CL:0000031!8.79e-10!33;CL:0000404!8.79e-10!33;CL:0000393!3.12e-07!39;CL:0000211!3.12e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-11,23;CL:0000337,2.71e-11,23;CL:0000540,5.68e-10,33;CL:0000047,5.68e-10,33;CL:0000031,5.68e-10,33;CL:0000404,5.68e-10,33;CL:0000393,1.68e-07,39;CL:0000211,1.68e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.69e-09!34;UBERON:0000033!2.05e-08!63;UBERON:0001017!2.36e-08!73;UBERON:0005743!2.36e-08!73;UBERON:0000073!3.35e-08!75;UBERON:0001016!3.35e-08!75;UBERON:0001049!3.62e-08!52;UBERON:0005068!3.62e-08!52;UBERON:0006241!3.62e-08!52;UBERON:0007135!3.62e-08!52;UBERON:0002346!2.02e-07!71;UBERON:0003075!2.02e-07!71;UBERON:0007284!2.02e-07!71;UBERON:0000955!2.54e-07!50;UBERON:0006238!2.54e-07!50;UBERON:0007811!5.30e-07!86;UBERON:0002616!6.92e-07!49;UBERON:0003056!8.32e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.16e-10,64;UBERON:0003075,8.16e-10,64;UBERON:0007284,8.16e-10,64;UBERON:0002020,5.92e-09,34;UBERON:0000073,6.08e-09,54;UBERON:0010314,9.83e-09,92;UBERON:0001017,1.87e-08,73;UBERON:0001016,2.68e-08,75;UBERON:0001049,4.80e-08,52;UBERON:0005068,4.80e-08,52;UBERON:0006241,4.80e-08,52;UBERON:0007135,4.80e-08,52;UBERON:0010371,7.42e-08,73;UBERON:0004121,1.01e-07,95;UBERON:0000924,1.01e-07,95;UBERON:0006601,1.01e-07,95;UBERON:0003056,7.84e-07,49|phase1_expression=2.5623815536767,3.83872948403297,2.27499619694768,1.81478526784098,4.50806156951712,2.01455126294268,1.63528848416868,0.903863264091034,2.53419699873,2.80877431586392,0.68487187290202,1.7549874978974,1.54080656938085,1.04904482902797,0.999329285446988,0.202475267389826,0.699561878128147,3.94327706697797,3.15363197293199,2.97072756258621,7.90902598404949,0.794327609607082,0.522399578277871,0.95995453676044,0.91763712426868,3.44539178469012,2.58457197695445,3.01659725760245,1.33016393619462,2.77233142735924,1.10865255327652,0.635030673459631,0.61506478758457,0,2.02196133825892,1.82858109894342,1.22501613757421,2.51118978442145,3.906676722619,2.61761871986899,2.35292595212406,0,3.39857247121808,0.629484089877886,0.506884656097573,2.0190142737785,0.782391344348039,0.872100625521786,0.219686182734472,0.388859798148567,0.699932108126813,0,2.18117387875057,0,0.672187598284928,0,2.57880095944881,1.03134418455488,2.83243045203437,2.11596391708813,2.53532561402472,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0,3.62913643079672,2.70011876663381,3.36519938162211,3.42781181284564,3.3130281142742,5.51208596467293,4.50473713785711,1.83843757322004,4.40463523997555,4.21368215681119,6.14426133024974,5.53922408466814,5.85520919055422,4.16730696445408,3.07101298901519,3.37657566019008,4.27835093775068,6.77645746589436,6.40672563595963,5.96478226640962,1.36307147999731,1.96486056277642,0.579728977403356,0,0,1.07940638327563,2.59910566979068,0.896053774194671,1.12355536105401,1.02258193546835,0.519572009205738,0.70667914902068,2.53518155598025,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,2.51204535381932,1.55362730188303,0.445326417194474,0.520455980298408,1.52232739156071,0.922461989024234,1.20578112442098,1.52865319276416,0.376999773989026,1.97755974187499,0.289198713839823,0,1.45590164952668,1.54589062922275,0.969750506270444,0,3.51336956413857,3.35114730901528,1.27728527604296,2.51611761462433,2.99951365496704,1.52484272487678,3.59497534571574,4.57500602818627,5.52879149296603,2.9550134432687,3.3243009452943,3.53239675751252,2.43361894601636,2.54598409625791,1.7416975885413,0.505445516867349,1.05220927943237,2.86264974517948,5.28774840196988,3.24111833649629,2.71268672104287,4.21826294738233,2.69038812598185,4.2165776051878,1.81092359517311,2.15567992932842,1.51284864134255,1.75951124163949,1.7535658594206,1.94633074457919,1.74126083261083,0.823128545631774,2.7864797354589,4.21327912387941,1.28673953557358,0.284163499395593,2.48550927042602,2.57978665979206,1.62055855314913,1.18372367792605,2.75469924446365,2.31400669331067,2.79040733700489,2.95100741539581,6.18856314545998,2.96207729844265,1.47750717671186,2.67527071501324,2.63159977365598,2.19550115291051,1.61047702512446,1.89260953707715,5.14523061896422,2.64335026387038,1.58670339998127,2.55945900642281,2.09013004674395,2.06187938115349,2.8235693447268,2.89091456998331,1.52180500890047,1.42358718463353,1.4822905925161,2.01068167040216,1.39269530428806,0.779856348476481,2.69645822596266,1.72910439899755,2.19055400579804,0.189667900953082,1.82797620175566,1.1270773567308,2.64746726198909,1.35766741017338,1.54298803758701,1.51767689098217,0.442830443938806,1.09899109488962,0.493588655687202,0.592905254174298,0.83422552858047,0.9827949755660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| ||
|EntrezGene=227399 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=E9PWR1,Q6ZQB6 | |||
|association_with_transcript=0bp_to_NM_173760,uc007cfk.2,uc007cfl.1_5end | |||
|description=CAGE_peak_2_at_Ppip5k2_5end | |||
|id=chr1:99666645..99666676,- | |||
|ontology_enrichment_celltype=CL:0000117!4.49e-11!23;CL:0000337!4.49e-11!23;CL:0000540!8.79e-10!33;CL:0000047!8.79e-10!33;CL:0000031!8.79e-10!33;CL:0000404!8.79e-10!33;CL:0000393!3.12e-07!39;CL:0000211!3.12e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-11,23;CL:0000337,2.71e-11,23;CL:0000540,5.68e-10,33;CL:0000047,5.68e-10,33;CL:0000031,5.68e-10,33;CL:0000404,5.68e-10,33;CL:0000393,1.68e-07,39;CL:0000211,1.68e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.69e-09!34;UBERON:0000033!2.05e-08!63;UBERON:0001017!2.36e-08!73;UBERON:0005743!2.36e-08!73;UBERON:0000073!3.35e-08!75;UBERON:0001016!3.35e-08!75;UBERON:0001049!3.62e-08!52;UBERON:0005068!3.62e-08!52;UBERON:0006241!3.62e-08!52;UBERON:0007135!3.62e-08!52;UBERON:0002346!2.02e-07!71;UBERON:0003075!2.02e-07!71;UBERON:0007284!2.02e-07!71;UBERON:0000955!2.54e-07!50;UBERON:0006238!2.54e-07!50;UBERON:0007811!5.30e-07!86;UBERON:0002616!6.92e-07!49;UBERON:0003056!8.32e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.16e-10,64;UBERON:0003075,8.16e-10,64;UBERON:0007284,8.16e-10,64;UBERON:0002020,5.92e-09,34;UBERON:0000073,6.08e-09,54;UBERON:0010314,9.83e-09,92;UBERON:0001017,1.87e-08,73;UBERON:0001016,2.68e-08,75;UBERON:0001049,4.80e-08,52;UBERON:0005068,4.80e-08,52;UBERON:0006241,4.80e-08,52;UBERON:0007135,4.80e-08,52;UBERON:0010371,7.42e-08,73;UBERON:0004121,1.01e-07,95;UBERON:0000924,1.01e-07,95;UBERON:0006601,1.01e-07,95;UBERON:0003056,7.84e-07,49 | |||
|phase1_expression=2.5623815536767,3.83872948403297,2.27499619694768,1.81478526784098,4.50806156951712,2.01455126294268,1.63528848416868,0.903863264091034,2.53419699873,2.80877431586392,0.68487187290202,1.7549874978974,1.54080656938085,1.04904482902797,0.999329285446988,0.202475267389826,0.699561878128147,3.94327706697797,3.15363197293199,2.97072756258621,7.90902598404949,0.794327609607082,0.522399578277871,0.95995453676044,0.91763712426868,3.44539178469012,2.58457197695445,3.01659725760245,1.33016393619462,2.77233142735924,1.10865255327652,0.635030673459631,0.61506478758457,0,2.02196133825892,1.82858109894342,1.22501613757421,2.51118978442145,3.906676722619,2.61761871986899,2.35292595212406,0,3.39857247121808,0.629484089877886,0.506884656097573,2.0190142737785,0.782391344348039,0.872100625521786,0.219686182734472,0.388859798148567,0.699932108126813,0,2.18117387875057,0,0.672187598284928,0,2.57880095944881,1.03134418455488,2.83243045203437,2.11596391708813,2.53532561402472,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0,3.62913643079672,2.70011876663381,3.36519938162211,3.42781181284564,3.3130281142742,5.51208596467293,4.50473713785711,1.83843757322004,4.40463523997555,4.21368215681119,6.14426133024974,5.53922408466814,5.85520919055422,4.16730696445408,3.07101298901519,3.37657566019008,4.27835093775068,6.77645746589436,6.40672563595963,5.96478226640962,1.36307147999731,1.96486056277642,0.579728977403356,0,0,1.07940638327563,2.59910566979068,0.896053774194671,1.12355536105401,1.02258193546835,0.519572009205738,0.70667914902068,2.53518155598025,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,2.51204535381932,1.55362730188303,0.445326417194474,0.520455980298408,1.52232739156071,0.922461989024234,1.20578112442098,1.52865319276416,0.376999773989026,1.97755974187499,0.289198713839823,0,1.45590164952668,1.54589062922275,0.969750506270444,0,3.51336956413857,3.35114730901528,1.27728527604296,2.51611761462433,2.99951365496704,1.52484272487678,3.59497534571574,4.57500602818627,5.52879149296603,2.9550134432687,3.3243009452943,3.53239675751252,2.43361894601636,2.54598409625791,1.7416975885413,0.505445516867349,1.05220927943237,2.86264974517948,5.28774840196988,3.24111833649629,2.71268672104287,4.21826294738233,2.69038812598185,4.2165776051878,1.81092359517311,2.15567992932842,1.51284864134255,1.75951124163949,1.7535658594206,1.94633074457919,1.74126083261083,0.823128545631774,2.7864797354589,4.21327912387941,1.28673953557358,0.284163499395593,2.48550927042602,2.57978665979206,1.62055855314913,1.18372367792605,2.75469924446365,2.31400669331067,2.79040733700489,2.95100741539581,6.18856314545998,2.96207729844265,1.47750717671186,2.67527071501324,2.63159977365598,2.19550115291051,1.61047702512446,1.89260953707715,5.14523061896422,2.64335026387038,1.58670339998127,2.55945900642281,2.09013004674395,2.06187938115349,2.8235693447268,2.89091456998331,1.52180500890047,1.42358718463353,1.4822905925161,2.01068167040216,1.39269530428806,0.779856348476481,2.69645822596266,1.72910439899755,2.19055400579804,0.189667900953082,1.82797620175566,1.1270773567308,2.64746726198909,1.35766741017338,1.54298803758701,1.51767689098217,0.442830443938806,1.09899109488962,0.493588655687202,0.592905254174298,0.83422552858047,0.982794975566015,0.899448449539415,1.21716072833102,0.72353147925725,0.763877555344259,0.863088412352432,2.10775794807546,2.74561413188081,0,0,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,1.10851914099963,2.27389694124582,1.46668478797823,1.86719594352707,1.64283173801951,1.67506257441816,0.952174563544055,0.780534591431195,1.7339865851681,1.10732344824387,2.39182152986231,0.491589944147214,0.863424909329478,1.01254341007058,1.50791283939272,1.63171705145613,0,0.551873492609465,5.29816946959713,5.74337264301796,0.819674726883377,1.26235463602186,1.57754109708128,1.95219372148319,1.50796378412959,2.38968797952552,2.00518806674155,2.83076530788832,2.02405350837447,1.75353514746787,1.18586333383957,5.14114106274891,0.567760340833074,1.06839362200353,2.76907830901079,0.989820737835213,0,1.69946445308487,1.81394134178851,1.88605079755898,0.295301892880773,1.22974059177571,1.55056975900933,1.09060118843252,0,0.948110273807448,0,1.03135543248187,0.680879211507576,2.16073312837572,0.905510786479282,1.07168517515796,1.24138163549592,1.60531935841864,1.64549020602121,0.304464949114599,1.17335854031855,2.1183207086382,0.882113592219848,1.15420377059036,1.93757312035087,1.68876189798836,0.835606408021955,0.820704498725306,1.7488850197791,5.56275906031529,1.53783792718067,1.03193433981611,1.11116716421827,1.50694765603753,1.6403307326523,1.37266903923914,0.849892149969277,1.39951452323658,1.65839968565309,0,2.21435195506795,1.42323626988794,1.72808545314882,0.418176592028937,0.87345025498471,0.944050424693745,1.1571483801547,0.26175594198403,0.648074866458964,0,28.1846469342095,3.28936401296753,2.15096037594227,2.33341426012857,1.6790777052105,3.71703476079712,2.93393096614385,1.69265700297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| |||
|short_description=p2@Ppip5k2 | |||
}} |
Revision as of 21:23, 13 September 2013
Short description: | p2@Ppip5k2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppip5k2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_NM_173760, uc007cfk.2, uc007cfl.1_5end |
EntrezGene: | Ppip5k2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.71e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-11 | 23 |
neuron | 5.68e-10 | 33 |
neuronal stem cell | 5.68e-10 | 33 |
neuroblast | 5.68e-10 | 33 |
electrically signaling cell | 5.68e-10 | 33 |
electrically responsive cell | 1.68e-07 | 39 |
electrically active cell | 1.68e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.16e-10 | 64 |
neural plate | 8.16e-10 | 64 |
presumptive neural plate | 8.16e-10 | 64 |
gray matter | 5.92e-09 | 34 |
regional part of nervous system | 6.08e-09 | 54 |
structure with developmental contribution from neural crest | 9.83e-09 | 92 |
central nervous system | 1.87e-08 | 73 |
nervous system | 2.68e-08 | 75 |
neural tube | 4.80e-08 | 52 |
neural rod | 4.80e-08 | 52 |
future spinal cord | 4.80e-08 | 52 |
neural keel | 4.80e-08 | 52 |
ecto-epithelium | 7.42e-08 | 73 |
ectoderm-derived structure | 1.01e-07 | 95 |
ectoderm | 1.01e-07 | 95 |
presumptive ectoderm | 1.01e-07 | 95 |
pre-chordal neural plate | 7.84e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.