Personal tools

FFCP PHASE1:Mm9::chr6:47404339..47404422,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=26965|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143941_5end|description=CAGE_peak_1_at_Cul1_5end|id=chr6:47404339..47404422,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!9.11e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.39e-07,45;UBERON:0003104,3.17e-07,61;UBERON:0009142,3.17e-07,61|phase1_expression=40.0372117761985,36.6424178021329,40.0399330662792,46.277024329945,38.0680754759224,29.0431140407569,32.004931761587,23.8878148366916,34.63402564931,35.811872527265,27.9085288207573,32.8661295060786,27.7345182488553,22.4670434216823,33.9771957051976,34.8257459910501,30.7807226376385,28.8647881302787,31.1249764285027,19.9463136345074,26.8736796877381,25.4184835074266,26.3811787030325,37.1182420880703,31.8878900683366,35.0281498110162,35.7532456812032,38.5693506507741,44.4654801527915,29.9915854414318,31.9291935343639,15.2407361630311,7.99584223859941,0,28.5963103553762,27.2624818387927,32.6670970019791,29.2972141515835,27.346737058333,33.5055196143231,24.7057224973026,32.1031377930469,30.1016418879315,34.4957281253082,37.9149722760984,29.1839335937074,11.7358701652206,7.84890562969608,7.90870257844099,13.4156630361256,10.3589952002768,7.18762821824858,41.4423036962609,40.6202799526353,34.2815675125313,45.2776607423267,41.260815351181,44.8634720281375,14.1621522601718,14.2827564403449,12.6766280701236,9.4876468979357,8.00365316500025,5.39939830368839,5.93319817540185,9.2362414942993,6.89080254192331,8.4528027170742,34.6323305110315,20.1158848114219,27.3422449756797,10.8547374073445,11.2642955885323,26.0905402327852,12.6516021744072,17.4651569455904,30.8324466798288,37.9231394113008,44.2386815777981,16.353899678544,15.186948838,15.6274011167028,22.6138229191119,27.5753678915523,29.3372635731475,34.7661730858928,34.7386901149811,24.4183274031144,49.2977518599028,48.3657984683427,38.8418414860248,32.6961073252927,36.0384806865108,36.1601138397337,39.6363614643078,43.0105811613442,37.6391045953095,52.8333999991979,42.0853327456647,39.2206927706478,39.2953141176939,28.2318250311499,22.9324715735981,7.11066703153331,30.7417278235924,30.1498239915367,28.3093689208279,39.8501740219519,47.9035084747268,47.6499266398088,31.921300124969,27.0974275697806,35.9760175719451,37.2284922164978,42.9198781045323,45.8683058353315,76.1360500621872,50.0313774942894,38.9228642857945,45.9417853850642,52.5602813935737,35.3958934788712,48.4618579167118,38.6470652055242,45.8688287921467,39.3403865021231,32.9491592391281,38.3937747835781,31.7675567682662,39.2451475240635,40.2600530480391,25.5078334789115,33.3742694769171,47.3073596061111,26.5968697036237,45.9142774481754,33.3014719790534,44.4132885078032,34.1175723885461,47.5598594303431,28.4963770088321,28.7377630541841,24.6685117833328,30.8944876563216,32.8616290900914,30.6191791480791,32.4207966976662,44.7556831378497,18.5388473922244,32.3371397086971,29.7357399837074,24.3307262994608,32.531528159395,30.9944428204728,37.2465666898378,29.0590029555,33.004019803722,26.7641823399304,25.8588784449989,26.9263504296152,26.9704968978261,26.2890609733082,31.9605393040034,25.9728785906573,29.9278199001514,34.4150238230604,36.7534559917478,41.4516965403452,40.3171632288027,37.5943492741128,46.4524278697753,45.321996101853,38.2017200606428,44.2881181909227,38.062480690107,35.090472821336,73.683388605387,30.4118151663076,26.447743066369,28.5651106388339,28.6085764135047,35.2946168090849,32.2448163575062,35.9526433352737,39.3859121081945,40.1865449526587,46.2456784192496,44.3672932651766,42.3072069048491,41.3456927980942,49.7117514711797,60.9372296158364,9.293727146701,30.7328498920171,29.3040112750009,32.9915151109409,28.8989205879762,37.1018487219785,35.7286434752054,32.1790122595533,33.4407290302128,40.1040782745852,41.5033677922008,32.0342602974901,38.722122037301,37.5519727682706,39.5577236707581,41.4824714774157,35.3929933976174,26.4680446454746,47.0192157647603,53.2649141584878,67.5710570678566,42.7962089818779,44.6213872553822,58.5982996837299,49.3342887185259,56.9283355208773,47.8510762531506,35.6243854128511,34.3856100292675,28.6869194960068,28.8669005394858,41.7090581030121,39.2772007461923,59.5157625966286,54.2264895725297,41.6353616539697,51.1849807390534,45.8817281204066,41.271710665949,49.1806799177139,36.1899081454253,46.2319831245903,29.0140921081231,33.3883463028726,41.2615016268625,43.9543824720762,37.7050374366354,57.8158423298014,36.5989534522858,35.5299257309941,38.3453647964382,34.4115069051675,30.523418349288,30.5722653251939,33.5992882390162,34.1939353756235,30.8324466798288,38.5585579706168,36.3366618133168,20.4775444217344,29.971200521058,38.2730685296282,34.5137359683903,19.6652315285535,22.9765903293211,24.3300552885109,11.5167738223501,34.7401717176638,37.7305308025603,36.7169066772281,34.580245703318,27.495197940416,34.7881408297496,35.0660847043835,40.171873478947,31.5106914554793,10.2193360188376,37.2946440954971,33.694644392032,35.495394702812,36.694431594273,17.3545020995322,45.5263113643598,59.7366439835973,47.6341339798718,22.0947578941583,45.8558971816372,41.1334148010023,35.9310755449441,42.6766339337159,51.3006272468537,39.6810146302491,29.5606623780285,24.147263551697,28.5199572149356,34.8481645458678,35.2671107520245,35.460616847011,46.5740898183164,46.6038336237781,41.736392088936,27.6854479224383,20.0873355924021,32.5311147402958,33.5896609955802,39.5176879467346,31.2258466157034,38.1666100269043,41.9053020527453,39.5251472395885,55.9936684620545,33.552322906694,12.4012446510522,30.6508919390157,22.8332716830795,28.9732270632631,24.2820468138134,23.6538575687089,31.0996682411248,30.5980304383283,28.6266010282191,20.2930661493845,26.7867905819815,20.8567339614598,24.9352014806902,23.3153872764158,24.1652730738699,22.5573636541027,18.2786846398764,20.3130309688747,18.9042594783459,22.2126189885925,18.2896335972,18.5520180651787,19.68649190943,18.7613091198642,20.9209654905008,53.5083705331899,42.8432890011945,43.5112204555957,58.4238464946993,52.1611903886914,33.9705280566639,30.5863212526333,38.8006766133109,55.17293144389,32.1908550291728,33.6037422650239,39.5297904273184,39.3543787567045,27.4033007908257,21.1510291269116,26.3258775090404,27.0192721934532,26.2822597210839,27.4412965228465,23.1445785112714,31.9219898720825,30.3905818242359,38.1677545797222,27.2497111416377,24.6350301323019,31.5590353478294,31.5233637575508,34.0174362167324,31.5871514704747,40.5566879824384,28.8598302320697,30.6207729426515,34.9577332130586,36.0694745041251,24.7672719467198,38.2418275618023,34.5307504630032,39.9723323779207,34.5917462315834,27.7724094432186,33.8978789764335,30.7582685032044,35.7552184915528,34.9145801340877,34.268916196129,33.4758190357174,31.0422259496655,31.3707502983941,34.7908208427798,33.2178050747688,35.2646046904517,34.3754076262539,32.5367366490529,26.2352990934352,25.4806789496705,38.8326470019378,37.1726923503556,38.2576664137687,39.4858640223933,45.2142279459822|short_description=p1@Cul1}}
|EntrezGene=26965
|HGNC=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000143941_5end
|description=CAGE_peak_1_at_Cul1_5end
|id=chr6:47404339..47404422,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005256!9.11e-08!47
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.39e-07,45;UBERON:0003104,3.17e-07,61;UBERON:0009142,3.17e-07,61
|phase1_expression=40.0372117761985,36.6424178021329,40.0399330662792,46.277024329945,38.0680754759224,29.0431140407569,32.004931761587,23.8878148366916,34.63402564931,35.811872527265,27.9085288207573,32.8661295060786,27.7345182488553,22.4670434216823,33.9771957051976,34.8257459910501,30.7807226376385,28.8647881302787,31.1249764285027,19.9463136345074,26.8736796877381,25.4184835074266,26.3811787030325,37.1182420880703,31.8878900683366,35.0281498110162,35.7532456812032,38.5693506507741,44.4654801527915,29.9915854414318,31.9291935343639,15.2407361630311,7.99584223859941,0,28.5963103553762,27.2624818387927,32.6670970019791,29.2972141515835,27.346737058333,33.5055196143231,24.7057224973026,32.1031377930469,30.1016418879315,34.4957281253082,37.9149722760984,29.1839335937074,11.7358701652206,7.84890562969608,7.90870257844099,13.4156630361256,10.3589952002768,7.18762821824858,41.4423036962609,40.6202799526353,34.2815675125313,45.2776607423267,41.260815351181,44.8634720281375,14.1621522601718,14.2827564403449,12.6766280701236,9.4876468979357,8.00365316500025,5.39939830368839,5.93319817540185,9.2362414942993,6.89080254192331,8.4528027170742,34.6323305110315,20.1158848114219,27.3422449756797,10.8547374073445,11.2642955885323,26.0905402327852,12.6516021744072,17.4651569455904,30.8324466798288,37.9231394113008,44.2386815777981,16.353899678544,15.186948838,15.6274011167028,22.6138229191119,27.5753678915523,29.3372635731475,34.7661730858928,34.7386901149811,24.4183274031144,49.2977518599028,48.3657984683427,38.8418414860248,32.6961073252927,36.0384806865108,36.1601138397337,39.6363614643078,43.0105811613442,37.6391045953095,52.8333999991979,42.0853327456647,39.2206927706478,39.2953141176939,28.2318250311499,22.9324715735981,7.11066703153331,30.7417278235924,30.1498239915367,28.3093689208279,39.8501740219519,47.9035084747268,47.6499266398088,31.921300124969,27.0974275697806,35.9760175719451,37.2284922164978,42.9198781045323,45.8683058353315,76.1360500621872,50.0313774942894,38.9228642857945,45.9417853850642,52.5602813935737,35.3958934788712,48.4618579167118,38.6470652055242,45.8688287921467,39.3403865021231,32.9491592391281,38.3937747835781,31.7675567682662,39.2451475240635,40.2600530480391,25.5078334789115,33.3742694769171,47.3073596061111,26.5968697036237,45.9142774481754,33.3014719790534,44.4132885078032,34.1175723885461,47.5598594303431,28.4963770088321,28.7377630541841,24.6685117833328,30.8944876563216,32.8616290900914,30.6191791480791,32.4207966976662,44.7556831378497,18.5388473922244,32.3371397086971,29.7357399837074,24.3307262994608,32.531528159395,30.9944428204728,37.2465666898378,29.0590029555,33.004019803722,26.7641823399304,25.8588784449989,26.9263504296152,26.9704968978261,26.2890609733082,31.9605393040034,25.9728785906573,29.9278199001514,34.4150238230604,36.7534559917478,41.4516965403452,40.3171632288027,37.5943492741128,46.4524278697753,45.321996101853,38.2017200606428,44.2881181909227,38.062480690107,35.090472821336,73.683388605387,30.4118151663076,26.447743066369,28.5651106388339,28.6085764135047,35.2946168090849,32.2448163575062,35.9526433352737,39.3859121081945,40.1865449526587,46.2456784192496,44.3672932651766,42.3072069048491,41.3456927980942,49.7117514711797,60.9372296158364,9.293727146701,30.7328498920171,29.3040112750009,32.9915151109409,28.8989205879762,37.1018487219785,35.7286434752054,32.1790122595533,33.4407290302128,40.1040782745852,41.5033677922008,32.0342602974901,38.722122037301,37.5519727682706,39.5577236707581,41.4824714774157,35.3929933976174,26.4680446454746,47.0192157647603,53.2649141584878,67.5710570678566,42.7962089818779,44.6213872553822,58.5982996837299,49.3342887185259,56.9283355208773,47.8510762531506,35.6243854128511,34.3856100292675,28.6869194960068,28.8669005394858,41.7090581030121,39.2772007461923,59.5157625966286,54.2264895725297,41.6353616539697,51.1849807390534,45.8817281204066,41.271710665949,49.1806799177139,36.1899081454253,46.2319831245903,29.0140921081231,33.3883463028726,41.2615016268625,43.9543824720762,37.7050374366354,57.8158423298014,36.5989534522858,35.5299257309941,38.3453647964382,34.4115069051675,30.523418349288,30.5722653251939,33.5992882390162,34.1939353756235,30.8324466798288,38.5585579706168,36.3366618133168,20.4775444217344,29.971200521058,38.2730685296282,34.5137359683903,19.6652315285535,22.9765903293211,24.3300552885109,11.5167738223501,34.7401717176638,37.7305308025603,36.7169066772281,34.580245703318,27.495197940416,34.7881408297496,35.0660847043835,40.171873478947,31.5106914554793,10.2193360188376,37.2946440954971,33.694644392032,35.495394702812,36.694431594273,17.3545020995322,45.5263113643598,59.7366439835973,47.6341339798718,22.0947578941583,45.8558971816372,41.1334148010023,35.9310755449441,42.6766339337159,51.3006272468537,39.6810146302491,29.5606623780285,24.147263551697,28.5199572149356,34.8481645458678,35.2671107520245,35.460616847011,46.5740898183164,46.6038336237781,41.736392088936,27.6854479224383,20.0873355924021,32.5311147402958,33.5896609955802,39.5176879467346,31.2258466157034,38.1666100269043,41.9053020527453,39.5251472395885,55.9936684620545,33.552322906694,12.4012446510522,30.6508919390157,22.8332716830795,28.9732270632631,24.2820468138134,23.6538575687089,31.0996682411248,30.5980304383283,28.6266010282191,20.2930661493845,26.7867905819815,20.8567339614598,24.9352014806902,23.3153872764158,24.1652730738699,22.5573636541027,18.2786846398764,20.3130309688747,18.9042594783459,22.2126189885925,18.2896335972,18.5520180651787,19.68649190943,18.7613091198642,20.9209654905008,53.5083705331899,42.8432890011945,43.5112204555957,58.4238464946993,52.1611903886914,33.9705280566639,30.5863212526333,38.8006766133109,55.17293144389,32.1908550291728,33.6037422650239,39.5297904273184,39.3543787567045,27.4033007908257,21.1510291269116,26.3258775090404,27.0192721934532,26.2822597210839,27.4412965228465,23.1445785112714,31.9219898720825,30.3905818242359,38.1677545797222,27.2497111416377,24.6350301323019,31.5590353478294,31.5233637575508,34.0174362167324,31.5871514704747,40.5566879824384,28.8598302320697,30.6207729426515,34.9577332130586,36.0694745041251,24.7672719467198,38.2418275618023,34.5307504630032,39.9723323779207,34.5917462315834,27.7724094432186,33.8978789764335,30.7582685032044,35.7552184915528,34.9145801340877,34.268916196129,33.4758190357174,31.0422259496655,31.3707502983941,34.7908208427798,33.2178050747688,35.2646046904517,34.3754076262539,32.5367366490529,26.2352990934352,25.4806789496705,38.8326470019378,37.1726923503556,38.2576664137687,39.4858640223933,45.2142279459822
|short_description=p1@Cul1
}}

Revision as of 10:04, 14 September 2013

Short description:p1@Cul1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cul1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000143941_5end
EntrezGene:Cul1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cul1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G740.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I640.04
CD326+ enterocyte, pool1.CNhs13542.11848-124I346.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I438.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E734.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F235.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F132.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.73
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.47
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A133.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A431.12
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.38
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D137.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D231.89
GP2+ M cell, pool1.CNhs13228.11845-124H935.03
GP2+ M cell, pool2.CNhs13231.11846-124I135.75
GP2+ M cell, pool3.CNhs13240.11847-124I238.57
Ileum epithelium, pool1.CNhs13199.10252-104B944.47
Ileum epithelium, pool2.CNhs13232.10253-104C129.99
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C831.93
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G829.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H127.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H333.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D834.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D937.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B329.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A241.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I940.62
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C145.28
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E141.26
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C544.86
Mouse Granule cells, donor1.CNhs12131.11713-123C314.16
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.12
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.24
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F634.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.42
Mouse Schwann, donor1.CNhs12507.11728-123D949.30
Mouse Schwann, donor2.CNhs12573.11746-123F948.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C436.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C836.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F439.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F643.01
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A737.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I752.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E342.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I839.22
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G230.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G328.31
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B639.85
accessory axillary lymph node, adult.CNhs10475.1063-29H947.90
adrenal gland, adult.CNhs10508.49-24D747.65
adrenal gland, embryo E14.CNhs11038.406-44C531.92
adrenal gland, embryo E16.CNhs11004.1254-43D627.10
adrenal gland, embryo E17.CNhs11043.1263-45I135.98
adrenal gland, embryo E18.CNhs11026.1262-18F537.23
adrenal gland, neonate N00.CNhs11191.1311-23C142.92
adrenal gland, neonate N25.CNhs11223.1377-27I345.87
amnion, adult pregnant day17.5.CNhs10488.583-22A876.14
aorta, adult.CNhs10498.46-23H150.03
bone (os femoris), adult.CNhs10483.56-12G238.92
bone (os femoris), neonate N02.CNhs11227.1985-43F545.94
bone (os femoris), neonate N16.CNhs11225.1525-43A652.56
bone (os femoris), neonate N20.CNhs11195.1350-25C335.40
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B238.65
cerebellum, neonate N30.CNhs11135.1395-42I245.87
colon, adult.CNhs10468.36-18H739.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C732.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D138.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.77
corpora quadrigemina, adult.CNhs10501.16-22A439.25
corpus striatum, adult.CNhs10487.19-21D840.26
corpus striatum, neonate N00.CNhs11226.630-43F125.51
cortex, adult.CNhs10473.12-14D533.37
cortex, neonate N30.CNhs11107.1392-42F247.31
diencephalon, adult.CNhs10482.20-12F226.60
diencephalon, neonate N30.CNhs11201.1388-42B245.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A244.41
epididymis, adult.CNhs10490.58-23B234.12
eyeball, adult.CNhs10484.31-12G447.56
eyeball, embryo E12.CNhs11016.345-16C628.50
eyeball, embryo E14.CNhs10521.399-16E228.74
eyeball, embryo E15.CNhs10593.426-16C924.67
eyeball, embryo E17.CNhs11023.1261-18D430.89
eyeball, neonate N00.CNhs11207.633-15C632.86
eyeball, neonate N01.CNhs11140.1532-43E730.62
eyeball, neonate N02.CNhs11205.1551-44G832.42
eyeball, neonate N16.CNhs11188.777-19A244.76
forelimb, embryo E11.CNhs10596.335-25E218.54
forelimb, embryo E12.CNhs10600.359-14H232.34
forelimb, embryo E13.CNhs10589.384-1E229.74
forelimb, embryo E14.CNhs10577.413-26A824.33
forelimb, embryo E15.CNhs11007.437-20E732.53
forelimb, embryo E17.CNhs10598.1517-43C430.99
forelimb, embryo E18.CNhs11008.1520-43B537.25
gonad, embryo E13.CNhs11044.1564-45I629.06
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C833.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D226.76
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.86
heart, embryo E11.CNhs10586.331-24E926.93
heart, embryo E12.CNhs11015.353-12F526.97
heart, embryo E13.CNhs11013.376-3I926.29
heart, embryo E14.CNhs10597.403-26D431.96
heart, embryo E15.CNhs11017.431-16C825.97
heart, embryo E16.CNhs11021.457-17C629.93
heart, embryo E17.CNhs11025.479-18E534.42
heart, embryo E18.CNhs11030.1283-20G336.75
heart, neonate N00.CNhs11213.639-21E341.45
heart, neonate N03.CNhs11221.1349-25I240.32
heart, neonate N10.CNhs11118.749-24G137.59
heart, neonate N16.CNhs11209.782-15G146.45
heart, neonate N20.CNhs11127.821-26I645.32
heart, neonate N25.CNhs11196.1351-25D338.20
heart, neonate N30.CNhs11202.1390-42D244.29
hippocampus, adult.CNhs10478.13-16E838.06
hippocampus, neonate N00.CNhs11228.627-43G135.09
intestinal mucosa, adult.CNhs10506.860-29I373.68
intestine, adult.CNhs10496.178-9A330.41
intestine, embryo E12.CNhs11019.1251-16I526.45
intestine, embryo E13.CNhs11010.381-16D528.57
intestine, embryo E15.CNhs10602.976-16D828.61
intestine, embryo E16.CNhs10585.463-22H435.29
intestine, embryo E17.CNhs10582.482-18D332.24
intestine, embryo E18.CNhs10526.1289-20F735.95
intestine, neonate N00.CNhs11126.644-26D139.39
intestine, neonate N01.CNhs11192.1322-23E940.19
intestine, neonate N06.CNhs11102.688-20B846.25
intestine, neonate N07.CNhs11095.720-20F244.37
intestine, neonate N10.CNhs11098.755-23A542.31
intestine, neonate N20.CNhs11187.827-18D141.35
intestine, neonate N25.CNhs11121.1352-25E349.71
intestine, neonate N30.CNhs11131.1384-42G160.94
kidney, embryo E14.CNhs10606.411-4I99.29
kidney, embryo E15.CNhs10997.434-16F830.73
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I232.99
kidney, embryo E18.CNhs11001.1288-20C728.90
kidney, neonate N00.CNhs11214.646-21G737.10
kidney, neonate N10.CNhs11206.758-6D535.73
kidney, neonate N20.CNhs11113.832-19I132.18
kidney, neonate N25.CNhs11122.1353-25F333.44
kidney, neonate N30.CNhs11203.1385-42H140.10
liver, adult pregnant day01.CNhs10466.508-5B241.50
liver, embryo E12.CNhs10601.355-15F832.03
liver, embryo E13.CNhs10524.378-3H638.72
liver, embryo E14.CNhs10594.409-16E137.55
liver, embryo E15.CNhs10520.433-16D739.56
liver, embryo E16.CNhs10523.462-17F541.48
liver, embryo E17.CNhs10510.481-18A335.39
liver, embryo E18.CNhs10579.499-43G426.47
liver, neonate N00.CNhs11117.641-24F447.02
liver, neonate N03.CNhs11123.1345-25G253.26
liver, neonate N06.CNhs11101.684-20A867.57
liver, neonate N07.CNhs11103.716-20H242.80
liver, neonate N10.CNhs11115.751-24B944.62
liver, neonate N20.CNhs11220.823-25A358.60
liver, neonate N25.CNhs11198.1368-26H149.33
liver, neonate N30.CNhs11106.1382-42D156.93
lung, adult.CNhs10474.28-22B147.85
lung, embryo E12.CNhs10522.354-16G235.62
lung, embryo E14.CNhs10604.404-26F834.39
lung, embryo E15.CNhs11020.432-17C528.69
lung, embryo E16.CNhs10998.458-17B628.87
lung, embryo E17.CNhs10605.480-44A641.71
lung, embryo E18.CNhs10583.1287-20I639.28
lung, neonate N00.CNhs11224.640-42C659.52
lung, neonate N06.CNhs11212.683-20E554.23
lung, neonate N07.CNhs11111.715-19A341.64
lung, neonate N10.CNhs11219.750-23E651.18
lung, neonate N20.CNhs11109.822-18A445.88
lung, neonate N25.CNhs11119.1359-25C741.27
lung, neonate N30.CNhs11133.1394-42H249.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A136.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A146.23
mammary gland, adult lactating day02.CNhs10480.595-22B629.01
mammary gland, adult pregnant day19.CNhs10476.588-5H233.39
medulla oblongata, adult.CNhs10477.17-12C241.26
medulla oblongata, neonate N30.CNhs11200.1396-42A343.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C737.71
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C257.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E136.60
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.53
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.35
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D734.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D433.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.19
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.83
olfactory brain, adult.CNhs10489.18-22I938.56
ovary, adult.CNhs10507.91-2I736.34
ovary, embryo E18.CNhs11040.505-44H720.48
ovary, neonate N00.CNhs11217.1299-22I429.97
oviduct, adult pregnant day01.CNhs10500.988-6G638.27
pancreas, adult.CNhs10486.34-16E434.51
pancreas, embryo E14.CNhs11012.405-44F419.67
pancreas, embryo E15.CNhs11042.1556-45F222.98
pancreas, embryo E16.CNhs11003.460-26E524.33
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I734.74
pancreas, neonate N00.CNhs11105.645-26G937.73
pancreas, neonate N01.CNhs11138.1531-43D736.72
pancreas, neonate N02.CNhs11139.1539-43D834.58
pancreas, neonate N16.CNhs11136.787-43B627.50
pancreas, neonate N25.CNhs11094.1555-45E234.79
pancreas, neonate N30.CNhs11182.1548-44H535.07
pituitary gland, adult.CNhs10493.21-1G840.17
pituitary gland, embryo E12.CNhs11018.346-16E631.51
pituitary gland, embryo E13.CNhs11009.370-44C710.22
pituitary gland, embryo E14.CNhs11037.398-44A537.29
pituitary gland, embryo E15.CNhs10592.427-16B933.69
pituitary gland, embryo E16.CNhs11036.449-43F635.50
pituitary gland, embryo E17.CNhs11039.1265-44F536.69
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I745.53
placenta, adult pregnant day17.CNhs10464.577-18G359.74
prostate, adult.CNhs10470.859-1F847.63
skin, adult.CNhs10492.30-1C322.09
skin, neonate N00.CNhs11124.650-25G445.86
skin, neonate N03.CNhs11215.662-22H341.13
skin, neonate N06.CNhs11097.693-20I535.93
skin, neonate N10.CNhs11108.762-6C442.68
small intestine, neonate N16.CNhs11114.790-21I151.30
spinal cord, adult.CNhs10505.24-13C939.68
spleen, adult.CNhs10465.25-2G229.56
spleen, embryo E16.CNhs11035.461-43C124.15
spleen, embryo E18.CNhs11011.1271-21F228.52
spleen, neonate N10.CNhs11116.752-24D134.85
spleen, neonate N20.CNhs11112.824-19H135.27
spleen, neonate N25.CNhs11099.1354-25G335.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C646.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C946.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D341.74
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E320.09
stomach, embryo E15.CNhs10603.1252-16G832.53
stomach, embryo E16.CNhs11022.459-17D433.59
stomach, embryo E17.CNhs11006.1035-18D539.52
stomach, embryo E18.CNhs10999.1286-20C631.23
stomach, neonate N03.CNhs11193.1340-24B838.17
stomach, neonate N07.CNhs11210.718-18A941.91
stomach, neonate N25.CNhs11104.1355-25E439.53
stomach, neonate N30.CNhs11134.1386-42I155.99
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F530.65
testis, embryo E15.CNhs11034.443-27C522.83
testis, embryo E16.CNhs11033.470-26G528.97
testis, embryo E17.CNhs11029.486-18I524.28
testis, embryo E18.CNhs11027.503-18G523.65
testis, neonate N00.CNhs11189.1300-22B731.10
testis, neonate N07.CNhs11222.726-26I430.60
testis, neonate N10.CNhs11204.763-44D928.63
testis, neonate N20.CNhs11110.839-18H320.29
testis, neonate N30.CNhs11130.1391-42E226.79
thymus, adult.CNhs10471.38-12B520.86
thymus, embryo E14.CNhs11041.402-44I424.94
thymus, embryo E15.CNhs11005.430-45I223.32
thymus, embryo E16.CNhs11002.456-26C524.17
thymus, embryo E17.CNhs10581.478-18C122.56
thymus, embryo E18.CNhs10595.1273-19G418.28
thymus, neonate N02.CNhs11181.1541-43F820.31
thymus, neonate N03.CNhs11137.2104-43C718.90
thymus, neonate N06.CNhs11197.681-26C422.21
thymus, neonate N07.CNhs11211.713-19D318.29
thymus, neonate N10.CNhs11194.748-24E418.55
thymus, neonate N20.CNhs11186.820-7A219.69
thymus, neonate N25.CNhs11125.1362-25G718.76
thymus, neonate N30.CNhs11132.1393-42G220.92
tongue, adult.CNhs10499.32-1B453.51
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H342.84
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F743.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G558.42
urinary bladder, adult.CNhs10481.879-12E452.16
uterus, adult pregnant day19.CNhs10497.590-15F533.97
uterus, adult.CNhs10509.92-27E530.59
vagina, adult.CNhs10502.89-27D538.80
vesicular gland, adult.CNhs10491.51-27F855.17
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A339.53
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.35
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I823.14
whole body, embryo E12.CNhs10587.857-27C931.92
whole body, embryo E13.CNhs10512.372-23H230.39
whole body, embryo E14.5.CNhs10578.420-27D238.17
whole body, embryo E14.CNhs10519.395-14B127.25
whole body, embryo E16.CNhs10514.453-14F224.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.52
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G531.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G540.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G530.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G534.53
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G539.97
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.76
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G534.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G531.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G534.79
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G533.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G534.38
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G532.54
whole body, embryo E17.5.CNhs10513.490-9F926.24
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B338.83
whole body, neonate N00.CNhs10525.657-19C237.17
whole body, neonate N01.CNhs10576.659-23C638.26
whole body, neonate N06.CNhs10515.692-21D139.49
whole body, neonate N10.CNhs10518.761-6B445.21





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk mesenchyme2.39e-0745
mesenchyme3.17e-0761
entire embryonic mesenchyme3.17e-0761







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:47404339..47404422,%2B&oldid=3034492"